RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 CTSAP10619 480 aa4.73□□□□□ -1.65
CLK1-202ENST00000409403 AKR1C4P17516 323 aa4.73□□□□□ -1.65
CLK1-202ENST00000409403 RPL12P30050 165 aaKnown RBP4.73□□□□□ -1.65
CLK1-202ENST00000409403 TLX1P31314 330 aaPredicted RBP4.73□□□□□ -1.65
CLK1-202ENST00000409403 FCGR2CP31995 323 aa4.73□□□□□ -1.65
CLK1-202ENST00000409403 BRS3P32247 399 aa4.73□□□□□ -1.65
CLK1-202ENST00000409403 P2RY1P47900 373 aa4.73□□□□□ -1.65
CLK1-202ENST00000409403 POLR2HP52434 150 aaKnown RBP4.73□□□□□ -1.65
CLK1-202ENST00000409403 PDX1P52945 283 aa4.73□□□□□ -1.65
CLK1-202ENST00000409403 CRYBB1P53674 252 aaPredicted RBP4.73□□□□□ -1.65
CLK1-202ENST00000409403 S100A10P60903 97 aa4.73□□□□□ -1.65
CLK1-202ENST00000409403 RPS15P62841 145 aaKnown RBP4.73□□□□□ -1.65
CLK1-202ENST00000409403 FOXF2Q12947 444 aa4.73□□□□□ -1.65
CLK1-202ENST00000409403 OR5I1Q13606 314 aa4.73□□□□□ -1.65
CLK1-202ENST00000409403 FAM189A2Q15884 450 aa4.73□□□□□ -1.65
CLK1-202ENST00000409403 GFI1BQ5VTD9 330 aa4.73□□□□□ -1.65
CLK1-202ENST00000409403 OR8G2PQ6IF36 304 aa4.73□□□□□ -1.65
CLK1-202ENST00000409403 DPPA3Q6W0C5 159 aa4.73□□□□□ -1.65
CLK1-202ENST00000409403 ZNF66Q6ZN08 573 aa4.73□□□□□ -1.65
CLK1-202ENST00000409403 ZNF705AQ6ZN79 300 aaPredicted RBP4.73□□□□□ -1.65
CLK1-202ENST00000409403 FAM57BQ71RH2 274 aa4.73□□□□□ -1.65
CLK1-202ENST00000409403 NUFIP2Q7Z417 695 aaKnown RBP4.73□□□□□ -1.65
CLK1-202ENST00000409403 ZNF429Q86V71 674 aa4.73□□□□□ -1.65
CLK1-202ENST00000409403 MEX3DQ86XN8 651 aaKnown RBP4.73□□□□□ -1.65
CLK1-202ENST00000409403 ZNF679Q8IYX0 411 aa4.73□□□□□ -1.65
CLK1-202ENST00000409403 ZNF676Q8N7Q3 588 aa4.73□□□□□ -1.65
CLK1-202ENST00000409403 COX18Q8N8Q8 333 aa4.73□□□□□ -1.65
CLK1-202ENST00000409403 POC1AQ8NBT0 407 aa4.73□□□□□ -1.65
CLK1-202ENST00000409403 OR4S1Q8NGB4 309 aa4.73□□□□□ -1.65
CLK1-202ENST00000409403 OR56B2PQ8NGI1 322 aa4.73□□□□□ -1.65
CLK1-202ENST00000409403 OR5K2Q8NHB8 316 aa4.73□□□□□ -1.65
CLK1-202ENST00000409403 OR14L1PQ8NHC6 308 aa4.73□□□□□ -1.65
CLK1-202ENST00000409403 ZNF563Q8TA94 476 aa4.73□□□□□ -1.65
CLK1-202ENST00000409403 ASB5Q8WWX0 329 aa4.73□□□□□ -1.65
CLK1-202ENST00000409403 CDS1Q92903 461 aa4.73□□□□□ -1.65
CLK1-202ENST00000409403 BPIFA2Q96DR5 249 aa4.73□□□□□ -1.65
CLK1-202ENST00000409403 ARSGQ96EG1 525 aa4.73□□□□□ -1.65
CLK1-202ENST00000409403 SMIM12Q96EX1 92 aa4.73□□□□□ -1.65
CLK1-202ENST00000409403 C16orf58Q96GQ5 468 aa4.73□□□□□ -1.65
CLK1-202ENST00000409403 SLC41A2Q96JW4 573 aa4.73□□□□□ -1.65
CLK1-202ENST00000409403 SCRT1Q9BWW7 348 aa4.73□□□□□ -1.65
CLK1-202ENST00000409403 ZBP1Q9H171 429 aa4.73□□□□□ -1.65
CLK1-202ENST00000409403 MTHFD2LQ9H903 347 aaPredicted RBP4.73□□□□□ -1.65
CLK1-202ENST00000409403 PELI2Q9HAT8 420 aa4.73□□□□□ -1.65
CLK1-202ENST00000409403 CDH20Q9HBT6 801 aa4.73□□□□□ -1.65
CLK1-202ENST00000409403 FKBP11Q9NYL4 201 aa4.73□□□□□ -1.65
CLK1-202ENST00000409403 KLHL13Q9P2N7 655 aa4.73□□□□□ -1.65
CLK1-202ENST00000409403 HSPB7Q9UBY9 170 aa4.73□□□□□ -1.65
CLK1-202ENST00000409403 FBXL17Q9UF56 701 aa4.73□□□□□ -1.65
CLK1-202ENST00000409403 LAMP3Q9UQV4 416 aa4.73□□□□□ -1.65
CLK1-202ENST00000409403 SIGLEC7Q9Y286 467 aa4.73□□□□□ -1.65
CLK1-202ENST00000409403 NTNG1Q9Y2I2 539 aa4.73□□□□□ -1.65
CLK1-202ENST00000409403 PPIL1Q9Y3C6 166 aa4.73□□□□□ -1.65
CLK1-202ENST00000409403 TMEM14AQ9Y6G1 99 aa4.73□□□□□ -1.65
CLK1-202ENST00000409403 AKAP9Q99996 3911 aa4.72□□□□□ -1.65
CLK1-202ENST00000409403 NIPBLQ6KC79 2804 aaeCLIP4.72□□□□□ -1.65
CLK1-202ENST00000409403 A0A0A0MQY5 61 aa4.72□□□□□ -1.65
CLK1-202ENST00000409403 TGIF2-C20orf24A0A0A6YYL0 155 aa4.72□□□□□ -1.65
CLK1-202ENST00000409403 A0A0U1RQV5 110 aa4.72□□□□□ -1.65
CLK1-202ENST00000409403 FAM230AA0A1W2PPH8 454 aa4.72□□□□□ -1.65
CLK1-202ENST00000409403 A0A1W2PQM1 296 aa4.72□□□□□ -1.65
CLK1-202ENST00000409403 XKRY2A2RUG3 117 aa4.72□□□□□ -1.65
CLK1-202ENST00000409403 MEIS3P1A6NDR6 274 aa4.72□□□□□ -1.65
CLK1-202ENST00000409403 MSGN1A6NI15 193 aa4.72□□□□□ -1.65
CLK1-202ENST00000409403 CEACAM18A8MTB9 384 aa4.72□□□□□ -1.65
CLK1-202ENST00000409403 E5RGE8 158 aa4.72□□□□□ -1.65
CLK1-202ENST00000409403 RHODO00212 210 aa4.72□□□□□ -1.65
CLK1-202ENST00000409403 XKRYO14609 159 aa4.72□□□□□ -1.65
CLK1-202ENST00000409403 HSD17B6O14756 317 aa4.72□□□□□ -1.65
CLK1-202ENST00000409403 SMAD9O15198 467 aaKnown RBP4.72□□□□□ -1.65
CLK1-202ENST00000409403 ERAL1O75616 437 aaKnown RBP4.72□□□□□ -1.65
CLK1-202ENST00000409403 CLDN7O95471 211 aa4.72□□□□□ -1.65
CLK1-202ENST00000409403 SLC16A8O95907 504 aa4.72□□□□□ -1.65
CLK1-202ENST00000409403 IGSF6O95976 241 aa4.72□□□□□ -1.65
CLK1-202ENST00000409403 IFNA21P01568 189 aa4.72□□□□□ -1.65
CLK1-202ENST00000409403 UMODP07911 640 aa4.72□□□□□ -1.65
CLK1-202ENST00000409403 SMIM10L2AP0DMW4 78 aa4.72□□□□□ -1.65
CLK1-202ENST00000409403 SMIM10L2BP0DMW5 78 aa4.72□□□□□ -1.65
CLK1-202ENST00000409403 FGF5P12034 268 aa4.72□□□□□ -1.65
CLK1-202ENST00000409403 ADRA2CP18825 462 aa4.72□□□□□ -1.65
CLK1-202ENST00000409403 BMP5P22003 454 aa4.72□□□□□ -1.65
CLK1-202ENST00000409403 LMO1P25800 156 aa4.72□□□□□ -1.65
CLK1-202ENST00000409403 RPL29P47914 159 aaKnown RBP4.72□□□□□ -1.65
CLK1-202ENST00000409403 RAB7AP51149 207 aa4.72□□□□□ -1.65
CLK1-202ENST00000409403 SGSHP51688 502 aa4.72□□□□□ -1.65
CLK1-202ENST00000409403 NCBP2P52298 156 aaKnown RBP eCLIP4.72□□□□□ -1.658e-8■□□□□ 9.9
CLK1-202ENST00000409403 ARF3P61204 181 aaPredicted RBP4.72□□□□□ -1.65
CLK1-202ENST00000409403 ARF6P62330 175 aa4.72□□□□□ -1.65
CLK1-202ENST00000409403 TBPL1P62380 186 aa4.72□□□□□ -1.65
CLK1-202ENST00000409403 HLA-DRB3P79483 266 aa4.72□□□□□ -1.65
CLK1-202ENST00000409403 ARF1P84077 181 aaKnown RBP4.72□□□□□ -1.65
CLK1-202ENST00000409403 PMPCAQ10713 525 aa4.72□□□□□ -1.65
CLK1-202ENST00000409403 FUT5Q11128 374 aa4.72□□□□□ -1.65
CLK1-202ENST00000409403 SGCGQ13326 291 aa4.72□□□□□ -1.65
CLK1-202ENST00000409403 CDKN3Q16667 212 aa4.72□□□□□ -1.65
CLK1-202ENST00000409403 UPP1Q16831 310 aa4.72□□□□□ -1.65
CLK1-202ENST00000409403 MAJINQ3KP22 176 aa4.72□□□□□ -1.65
CLK1-202ENST00000409403 C2orf76Q3KRA6 126 aa4.72□□□□□ -1.65
CLK1-202ENST00000409403 ALG10Q5BKT4 473 aa4.72□□□□□ -1.65
CLK1-202ENST00000409403 ZNF506Q5JVG8 444 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms