RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 LDLRAD2Q5SZI1 272 aa6.14□□□□□ -1.43
LSM5-202ENST00000409292 FAM27D1Q5T7N8 215 aa6.14□□□□□ -1.43
LSM5-202ENST00000409292 PRAMEF5Q5TYX0 476 aa6.14□□□□□ -1.43
LSM5-202ENST00000409292 FAM220AQ7Z4H9 259 aa6.14□□□□□ -1.43
LSM5-202ENST00000409292 TPRX1Q8N7U7 411 aa6.14□□□□□ -1.43
LSM5-202ENST00000409292 YIPF7Q8N8F6 280 aa6.14□□□□□ -1.43
LSM5-202ENST00000409292 DNAAF1Q8NEP3 725 aa6.14□□□□□ -1.43
LSM5-202ENST00000409292 OR14K1Q8NGZ2 314 aa6.14□□□□□ -1.43
LSM5-202ENST00000409292 HAVCR2Q8TDQ0 301 aa6.14□□□□□ -1.43
LSM5-202ENST00000409292 KIRREL1Q96J84 757 aa6.14□□□□□ -1.43
LSM5-202ENST00000409292 FAM107BQ9H098 131 aa6.14□□□□□ -1.43
LSM5-202ENST00000409292 MYLK2Q9H1R3 596 aa6.14□□□□□ -1.43
LSM5-202ENST00000409292 RHOFQ9HBH0 211 aa6.14□□□□□ -1.43
LSM5-202ENST00000409292 TVP23BQ9NYZ1 205 aa6.14□□□□□ -1.43
LSM5-202ENST00000409292 SMAD5-AS1Q9Y6J3 95 aa6.14□□□□□ -1.43
LSM5-202ENST00000409292 TRBV2A0A0J9YWF9 115 aa6.13□□□□□ -1.43
LSM5-202ENST00000409292 A6NIN4 97 aa6.13□□□□□ -1.43
LSM5-202ENST00000409292 SH2D7A6NKC9 451 aaPredicted RBP6.13□□□□□ -1.43
LSM5-202ENST00000409292 ZNF729A6NN14 1252 aaPredicted RBP6.13□□□□□ -1.43
LSM5-202ENST00000409292 H3BS24 57 aa6.13□□□□□ -1.43
LSM5-202ENST00000409292 SIRPB1O00241 398 aa6.13□□□□□ -1.43
LSM5-202ENST00000409292 RPP14O95059 124 aaKnown RBP6.13□□□□□ -1.43
LSM5-202ENST00000409292 IGLV1-47P01700 117 aa6.13□□□□□ -1.43
LSM5-202ENST00000409292 SNRNP70P08621 437 aaKnown RBP6.13□□□□□ -1.43
LSM5-202ENST00000409292 UBCP0CG48 685 aaKnown RBP6.13□□□□□ -1.43
LSM5-202ENST00000409292 OR5H8P0DN80 308 aa6.13□□□□□ -1.43
LSM5-202ENST00000409292 LYL1P12980 280 aa6.13□□□□□ -1.43
LSM5-202ENST00000409292 ZNF20P17024 532 aa6.13□□□□□ -1.43
LSM5-202ENST00000409292 CD34P28906 385 aa6.13□□□□□ -1.43
LSM5-202ENST00000409292 C21orf33P30042 268 aaPredicted RBP6.13□□□□□ -1.43
LSM5-202ENST00000409292 HCCSP53701 268 aa6.13□□□□□ -1.43
LSM5-202ENST00000409292 SNU13P55769 128 aaKnown RBP6.13□□□□□ -1.43
LSM5-202ENST00000409292 CDK5Q00535 292 aa6.13□□□□□ -1.43
LSM5-202ENST00000409292 ZNF91Q05481 1191 aa6.13□□□□□ -1.43
LSM5-202ENST00000409292 SCN1BQ07699 218 aa6.13□□□□□ -1.43
LSM5-202ENST00000409292 MADCAM1Q13477 382 aa6.13□□□□□ -1.43
LSM5-202ENST00000409292 TRIM25Q14258 630 aaKnown RBP6.13□□□□□ -1.43
LSM5-202ENST00000409292 ZNF146Q15072 292 aa6.13□□□□□ -1.43
LSM5-202ENST00000409292 MLANAQ16655 118 aa6.13□□□□□ -1.43
LSM5-202ENST00000409292 KRTAP19-4Q3LI73 84 aa6.13□□□□□ -1.43
LSM5-202ENST00000409292 KRBOX4Q5JUW0 171 aa6.13□□□□□ -1.43
LSM5-202ENST00000409292 ETV3LQ6ZN32 361 aa6.13□□□□□ -1.43
LSM5-202ENST00000409292 LHFPL2Q6ZUX7 228 aa6.13□□□□□ -1.43
LSM5-202ENST00000409292 MEPCEQ7L2J0 689 aaKnown RBP6.13□□□□□ -1.43
LSM5-202ENST00000409292 SLC35F2Q8IXU6 374 aa6.13□□□□□ -1.43
LSM5-202ENST00000409292 OR8H3Q8N146 312 aa6.13□□□□□ -1.43
LSM5-202ENST00000409292 DRAM1Q8N682 238 aa6.13□□□□□ -1.43
LSM5-202ENST00000409292 CHST4Q8NCG5 386 aa6.13□□□□□ -1.43
LSM5-202ENST00000409292 CORO2AQ92828 525 aa6.13□□□□□ -1.43
LSM5-202ENST00000409292 P2RX4Q99571 388 aa6.13□□□□□ -1.43
LSM5-202ENST00000409292 ASCL2Q99929 193 aa6.13□□□□□ -1.43
LSM5-202ENST00000409292 APOL4Q9BPW4 351 aa6.13□□□□□ -1.43
LSM5-202ENST00000409292 TTTY10Q9BZA0 68 aa6.13□□□□□ -1.43
LSM5-202ENST00000409292 CHST5Q9GZS9 411 aa6.13□□□□□ -1.43
LSM5-202ENST00000409292 SLC25A19Q9HC21 320 aa6.13□□□□□ -1.43
LSM5-202ENST00000409292 MED4Q9NPJ6 270 aa6.13□□□□□ -1.43
LSM5-202ENST00000409292 CLN6Q9NWW5 311 aa6.13□□□□□ -1.43
LSM5-202ENST00000409292 MTCH1Q9NZJ7 389 aa6.13□□□□□ -1.43
LSM5-202ENST00000409292 HHLA2Q9UM44 414 aa6.13□□□□□ -1.43
LSM5-202ENST00000409292 ZNF256Q9Y2P7 627 aaPredicted RBP6.13□□□□□ -1.43
LSM5-202ENST00000409292 GSTK1Q9Y2Q3 226 aa6.13□□□□□ -1.43
LSM5-202ENST00000409292 ODAMA1E959 279 aa6.12□□□□□ -1.43
LSM5-202ENST00000409292 NCBP2LA6PVI3 153 aaKnown RBP6.12□□□□□ -1.43
LSM5-202ENST00000409292 DEGS1O15121 323 aa6.12□□□□□ -1.43
LSM5-202ENST00000409292 MPZL2O60487 215 aa6.12□□□□□ -1.43
LSM5-202ENST00000409292 ELANEP08246 267 aa6.12□□□□□ -1.43
LSM5-202ENST00000409292 VDAC1P21796 283 aa6.12□□□□□ -1.43
LSM5-202ENST00000409292 CCL1P22362 96 aa6.12□□□□□ -1.43
LSM5-202ENST00000409292 SLC2A5P22732 501 aa6.12□□□□□ -1.43
LSM5-202ENST00000409292 IL3RAP26951 378 aa6.12□□□□□ -1.43
LSM5-202ENST00000409292 DUSP1P28562 367 aa6.12□□□□□ -1.43
LSM5-202ENST00000409292 AESQ08117 197 aa6.12□□□□□ -1.43
LSM5-202ENST00000409292 MFGE8Q08431 387 aaPredicted RBP6.12□□□□□ -1.43
LSM5-202ENST00000409292 GPR50Q13585 617 aa6.12□□□□□ -1.43
LSM5-202ENST00000409292 KIR2DS1Q14954 304 aa6.12□□□□□ -1.43
LSM5-202ENST00000409292 ODF4Q2M2E3 257 aa6.12□□□□□ -1.43
LSM5-202ENST00000409292 LCE1DQ5T752 114 aa6.12□□□□□ -1.43
LSM5-202ENST00000409292 C10orf99Q6UWK7 81 aa6.12□□□□□ -1.43
LSM5-202ENST00000409292 PLEKHG7Q6ZR37 379 aa6.12□□□□□ -1.43
LSM5-202ENST00000409292 LCNL1Q6ZST4 164 aa6.12□□□□□ -1.43
LSM5-202ENST00000409292 GID4Q8IVV7 300 aa6.12□□□□□ -1.43
LSM5-202ENST00000409292 STPG2Q8N412 459 aa6.12□□□□□ -1.43
LSM5-202ENST00000409292 BBS1Q8NFJ9 593 aa6.12□□□□□ -1.43
LSM5-202ENST00000409292 OR52N4Q8NGI2 321 aa6.12□□□□□ -1.43
LSM5-202ENST00000409292 OR10X1Q8NGY0 326 aa6.12□□□□□ -1.43
LSM5-202ENST00000409292 OR56B4Q8NH76 319 aa6.12□□□□□ -1.43
LSM5-202ENST00000409292 SPSB1Q96BD6 273 aa6.12□□□□□ -1.43
LSM5-202ENST00000409292 CPNE2Q96FN4 548 aaPredicted RBP6.12□□□□□ -1.43
LSM5-202ENST00000409292 PRR25Q96S07 402 aa6.12□□□□□ -1.43
LSM5-202ENST00000409292 MYCBPQ99417 103 aaPredicted RBP6.12□□□□□ -1.43
LSM5-202ENST00000409292 RASL11BQ9BPW5 248 aa6.12□□□□□ -1.43
LSM5-202ENST00000409292 BARHL1Q9BZE3 327 aa6.12□□□□□ -1.43
LSM5-202ENST00000409292 DCLRE1BQ9H816 532 aa6.12□□□□□ -1.43
LSM5-202ENST00000409292 ZNF286AQ9HBT8 521 aa6.12□□□□□ -1.43
LSM5-202ENST00000409292 ENOPH1Q9UHY7 261 aa6.12□□□□□ -1.43
LSM5-202ENST00000409292 LSM4Q9Y4Z0 139 aaKnown RBP6.12□□□□□ -1.43
LSM5-202ENST00000409292 A0A087X0M5 115 aa6.11□□□□□ -1.43
LSM5-202ENST00000409292 A0A1B0GTI1 187 aa6.11□□□□□ -1.43
LSM5-202ENST00000409292 KBTBD11-OT1A0A1B0GTJ5 212 aa6.11□□□□□ -1.43
LSM5-202ENST00000409292 A0A1B0GX30 115 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms