RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 OR52I2Q8NH67 350 aa17.1■□□□□ 0.33
CHKB-201ENST00000406938 CCDC32Q9BV29 185 aa17.1■□□□□ 0.33
CHKB-201ENST00000406938 CHST6Q9GZX3 395 aa17.1■□□□□ 0.33
CHKB-201ENST00000406938 CENPEQ02224 2701 aa17.1■□□□□ 0.33
CHKB-201ENST00000406938 MEIS3P1A6NDR6 274 aa17.1■□□□□ 0.33
CHKB-201ENST00000406938 GSTZ1O43708 216 aaPredicted RBP17.1■□□□□ 0.33
CHKB-201ENST00000406938 IGHV2-70P01814 119 aa17.1■□□□□ 0.33
CHKB-201ENST00000406938 LPLP06858 475 aa17.1■□□□□ 0.33
CHKB-201ENST00000406938 ARFRP1Q13795 201 aa17.1■□□□□ 0.33
CHKB-201ENST00000406938 AVPI1Q5T686 147 aa17.1■□□□□ 0.33
CHKB-201ENST00000406938 OR8H2Q8N162 312 aa17.1■□□□□ 0.33
CHKB-201ENST00000406938 ZNF525Q8N782 197 aa17.1■□□□□ 0.33
CHKB-201ENST00000406938 FCAMRQ8WWV6 532 aa17.1■□□□□ 0.33
CHKB-201ENST00000406938 BORCS5Q969J3 196 aa17.1■□□□□ 0.33
CHKB-201ENST00000406938 SDSLQ96GA7 329 aa17.1■□□□□ 0.33
CHKB-201ENST00000406938 GAFA1Q96PS6 74 aa17.1■□□□□ 0.33
CHKB-201ENST00000406938 CCL13Q99616 98 aa17.1■□□□□ 0.33
CHKB-201ENST00000406938 HDHD3Q9BSH5 251 aaPredicted RBP17.1■□□□□ 0.33
CHKB-201ENST00000406938 TMEM165Q9HC07 324 aa17.1■□□□□ 0.33
CHKB-201ENST00000406938 A0A1B0GW55 424 aa17.09■□□□□ 0.33
CHKB-201ENST00000406938 TMEM82A0PJX8 343 aa17.09■□□□□ 0.33
CHKB-201ENST00000406938 PPIHO43447 177 aaKnown RBP17.09■□□□□ 0.33
CHKB-201ENST00000406938 SSX4O60224 188 aa17.09■□□□□ 0.33
CHKB-201ENST00000406938 SSX5O60225 188 aa17.09■□□□□ 0.33
CHKB-201ENST00000406938 ZNF737O75373 536 aa17.09■□□□□ 0.33
CHKB-201ENST00000406938 FSTL3O95633 263 aa17.09■□□□□ 0.33
CHKB-201ENST00000406938 GLAP06280 429 aa17.09■□□□□ 0.33
CHKB-201ENST00000406938 CD3GP09693 182 aa17.09■□□□□ 0.33
CHKB-201ENST00000406938 CSF3P09919 207 aa17.09■□□□□ 0.33
CHKB-201ENST00000406938 DUX4L2P0CJ85 424 aa17.09■□□□□ 0.33
CHKB-201ENST00000406938 DUX4L3P0CJ86 424 aa17.09■□□□□ 0.33
CHKB-201ENST00000406938 DUX4L4P0CJ87 422 aa17.09■□□□□ 0.33
CHKB-201ENST00000406938 DUX4L5P0CJ88 424 aa17.09■□□□□ 0.33
CHKB-201ENST00000406938 DUX4L6P0CJ89 424 aa17.09■□□□□ 0.33
CHKB-201ENST00000406938 DUX4L7P0CJ90 424 aa17.09■□□□□ 0.33
CHKB-201ENST00000406938 MDH2P40926 338 aaKnown RBP17.09■□□□□ 0.33
CHKB-201ENST00000406938 ATP5J2P56134 94 aa17.09■□□□□ 0.33
CHKB-201ENST00000406938 RBM39Q14498 530 aaKnown RBP17.09■□□□□ 0.33
CHKB-201ENST00000406938 ATXN7L3Q14CW9 347 aaPredicted RBP17.09■□□□□ 0.33
CHKB-201ENST00000406938 DUX4L9Q6RFH8 374 aaPredicted RBP17.09■□□□□ 0.33
CHKB-201ENST00000406938 ZNF788Q6ZQV5 615 aa17.09■□□□□ 0.33
CHKB-201ENST00000406938 C17orf107Q6ZR85 190 aa17.09■□□□□ 0.33
CHKB-201ENST00000406938 DNM1P46Q6ZS02 220 aa17.09■□□□□ 0.33
CHKB-201ENST00000406938 FAM216BQ8N7L0 139 aa17.09■□□□□ 0.33
CHKB-201ENST00000406938 ZNRF1Q8ND25 227 aa17.09■□□□□ 0.33
CHKB-201ENST00000406938 GPX8Q8TED1 209 aa17.09■□□□□ 0.33
CHKB-201ENST00000406938 TRIM63Q969Q1 353 aa17.09■□□□□ 0.33
CHKB-201ENST00000406938 TIMD4Q96H15 378 aa17.09■□□□□ 0.33
CHKB-201ENST00000406938 TMEM246Q9BRR3 403 aa17.09■□□□□ 0.33
CHKB-201ENST00000406938 SCPEP1Q9HB40 452 aa17.09■□□□□ 0.33
CHKB-201ENST00000406938 DUX4Q9UBX2 424 aa17.09■□□□□ 0.33
CHKB-201ENST00000406938 ISPDA4D126 451 aa17.08■□□□□ 0.32
CHKB-201ENST00000406938 NKX6-3A6NJ46 265 aa17.08■□□□□ 0.32
CHKB-201ENST00000406938 LANCL1O43813 399 aa17.08■□□□□ 0.32
CHKB-201ENST00000406938 CA11O75493 328 aa17.08■□□□□ 0.32
CHKB-201ENST00000406938 IL7P13232 177 aa17.08■□□□□ 0.32
CHKB-201ENST00000406938 SELLP14151 372 aa17.08■□□□□ 0.32
CHKB-201ENST00000406938 OR3A1P47881 315 aa17.08■□□□□ 0.32
CHKB-201ENST00000406938 TMEM33P57088 247 aa17.08■□□□□ 0.32
CHKB-201ENST00000406938 KCNJ8Q15842 424 aa17.08■□□□□ 0.32
CHKB-201ENST00000406938 TRAPPC6BQ86SZ2 158 aa17.08■□□□□ 0.32
CHKB-201ENST00000406938 ZNF561Q8N587 486 aa17.08■□□□□ 0.32
CHKB-201ENST00000406938 OR4S1Q8NGB4 309 aa17.08■□□□□ 0.32
CHKB-201ENST00000406938 PERPQ96FX8 193 aa17.08■□□□□ 0.32
CHKB-201ENST00000406938 CMSS1Q9BQ75 279 aaKnown RBP17.08■□□□□ 0.32
CHKB-201ENST00000406938 THAP7Q9BT49 309 aaPredicted RBP17.08■□□□□ 0.32
CHKB-201ENST00000406938 ZNF665Q9H7R5 613 aa17.08■□□□□ 0.32
CHKB-201ENST00000406938 MYOZ1Q9NP98 299 aaPredicted RBP17.08■□□□□ 0.32
CHKB-201ENST00000406938 ETAA1Q9NY74 926 aa17.08■□□□□ 0.32
CHKB-201ENST00000406938 KLK11Q9UBX7 282 aa17.08■□□□□ 0.32
CHKB-201ENST00000406938 MAB21L2Q9Y586 359 aa17.08■□□□□ 0.32
CHKB-201ENST00000406938 SULT1C2O00338 296 aa17.07■□□□□ 0.32
CHKB-201ENST00000406938 TMPRSS2O15393 492 aa17.07■□□□□ 0.32
CHKB-201ENST00000406938 PAX1P15863 534 aa17.07■□□□□ 0.32
CHKB-201ENST00000406938 MRPS15P82914 257 aaKnown RBP17.07■□□□□ 0.32
CHKB-201ENST00000406938 ATPAF1Q5TC12 328 aaPredicted RBP17.07■□□□□ 0.32
CHKB-201ENST00000406938 DCDC5Q6ZRR9 648 aa17.07■□□□□ 0.32
CHKB-201ENST00000406938 PLPPR1Q8TBJ4 325 aa17.07■□□□□ 0.32
CHKB-201ENST00000406938 RAB1CQ92928 201 aa17.07■□□□□ 0.32
CHKB-201ENST00000406938 SHARPINQ9H0F6 387 aa17.07■□□□□ 0.32
CHKB-201ENST00000406938 DNTTIP1Q9H147 329 aa17.07■□□□□ 0.32
CHKB-201ENST00000406938 BARX1Q9HBU1 254 aaPredicted RBP17.07■□□□□ 0.32
CHKB-201ENST00000406938 C12orf4Q9NQ89 552 aa17.07■□□□□ 0.32
CHKB-201ENST00000406938 ABCB10Q9NRK6 738 aa17.07■□□□□ 0.32
CHKB-201ENST00000406938 SPG11Q96JI7 2443 aa17.07■□□□□ 0.32
CHKB-201ENST00000406938 TNFRSF13BO14836 293 aaPredicted RBP17.07■□□□□ 0.32
CHKB-201ENST00000406938 SIGLEC5O15389 551 aa17.07■□□□□ 0.32
CHKB-201ENST00000406938 UPK1BO75841 260 aa17.07■□□□□ 0.32
CHKB-201ENST00000406938 IL13RA1P78552 427 aa17.07■□□□□ 0.32
CHKB-201ENST00000406938 SHEQ5VZ18 495 aa17.07■□□□□ 0.32
CHKB-201ENST00000406938 TRIQKQ629K1 86 aa17.07■□□□□ 0.32
CHKB-201ENST00000406938 MUC20Q8N307 709 aaPredicted RBP17.07■□□□□ 0.32
CHKB-201ENST00000406938 SNX22Q96L94 193 aa17.07■□□□□ 0.32
CHKB-201ENST00000406938 GSX2Q9BZM3 304 aa17.07■□□□□ 0.32
CHKB-201ENST00000406938 ING3Q9NXR8 418 aa17.07■□□□□ 0.32
CHKB-201ENST00000406938 RBMX2Q9Y388 322 aaKnown RBP17.07■□□□□ 0.32
CHKB-201ENST00000406938 GDNFP39905 211 aa17.06■□□□□ 0.32
CHKB-201ENST00000406938 GPR6P46095 362 aaPredicted RBP17.06■□□□□ 0.32
CHKB-201ENST00000406938 GRK1Q15835 563 aa17.06■□□□□ 0.32
CHKB-201ENST00000406938 C16orf87Q6PH81 154 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms