RNA–Protein interactions for RNA: ENST00000402314.6

ATG3-202, Transcript of autophagy related 3, humanhuman

TSL 1 (best) BASIC

Gene ATG3, Length 3,010 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-202ENST00000402314 TRGC1P0CF51 173 aa12.24□□□□□ -0.45
ATG3-202ENST00000402314 HIST1H1BP16401 226 aaKnown RBP12.24□□□□□ -0.45
ATG3-202ENST00000402314 MSR1P21757 451 aa12.24□□□□□ -0.45
ATG3-202ENST00000402314 MPZP25189 248 aa12.24□□□□□ -0.45
ATG3-202ENST00000402314 RND3P61587 244 aa12.24□□□□□ -0.45
ATG3-202ENST00000402314 H3F3AP84243 136 aa12.24□□□□□ -0.45
ATG3-202ENST00000402314 ELOBQ15370 118 aa12.24□□□□□ -0.45
ATG3-202ENST00000402314 VAX1Q5SQQ9 334 aa12.24□□□□□ -0.45
ATG3-202ENST00000402314 OR2G3Q8NGZ4 309 aa12.24□□□□□ -0.45
ATG3-202ENST00000402314 LURAP1Q96LR2 239 aa12.24□□□□□ -0.45
ATG3-202ENST00000402314 DNAJC13O75165 2243 aa12.24□□□□□ -0.45
ATG3-202ENST00000402314 PGA5P0DJD9 388 aa12.24□□□□□ -0.45
ATG3-202ENST00000402314 MMP9P14780 707 aa12.24□□□□□ -0.45
ATG3-202ENST00000402314 LIFP15018 202 aa12.24□□□□□ -0.45
ATG3-202ENST00000402314 ZNF880Q6PDB4 577 aa12.24□□□□□ -0.45
ATG3-202ENST00000402314 DOK3Q7L591 496 aa12.24□□□□□ -0.45
ATG3-202ENST00000402314 RPS19BP1Q86WX3 136 aaKnown RBP12.24□□□□□ -0.45
ATG3-202ENST00000402314 ZIC4Q8N9L1 334 aa12.24□□□□□ -0.45
ATG3-202ENST00000402314 PBDC1Q9BVG4 233 aa12.24□□□□□ -0.45
ATG3-202ENST00000402314 GPR173Q9NS66 373 aa12.24□□□□□ -0.45
ATG3-202ENST00000402314 ZNF724A8MTY0 619 aa12.23□□□□□ -0.45
ATG3-202ENST00000402314 ZNF587BE7ETH6 402 aa12.23□□□□□ -0.45
ATG3-202ENST00000402314 TLX3O43711 291 aaPredicted RBP12.23□□□□□ -0.45
ATG3-202ENST00000402314 IGHV3-9P01782 118 aa12.23□□□□□ -0.45
ATG3-202ENST00000402314 RFPL3SP0C7P2 107 aa12.23□□□□□ -0.45
ATG3-202ENST00000402314 APLNRP35414 380 aa12.23□□□□□ -0.45
ATG3-202ENST00000402314 AKR1C8PQ5T2L2 129 aa12.23□□□□□ -0.45
ATG3-202ENST00000402314 ZNF429Q86V71 674 aa12.23□□□□□ -0.45
ATG3-202ENST00000402314 NABP1Q96AH0 204 aa12.23□□□□□ -0.45
ATG3-202ENST00000402314 WFIKKN1Q96NZ8 548 aa12.23□□□□□ -0.45
ATG3-202ENST00000402314 ALKBH3Q96Q83 286 aaPredicted RBP12.23□□□□□ -0.45
ATG3-202ENST00000402314 FAAP24Q9BTP7 215 aa12.23□□□□□ -0.45
ATG3-202ENST00000402314 OPA3Q9H6K4 179 aa12.23□□□□□ -0.45
ATG3-202ENST00000402314 SLC31A2O15432 143 aa12.23□□□□□ -0.45
ATG3-202ENST00000402314 DHHO43323 396 aa12.23□□□□□ -0.45
ATG3-202ENST00000402314 CYTIPO60759 359 aa12.23□□□□□ -0.45
ATG3-202ENST00000402314 CHRM2P08172 466 aa12.23□□□□□ -0.45
ATG3-202ENST00000402314 FGF5P12034 268 aa12.23□□□□□ -0.45
ATG3-202ENST00000402314 OTX2P32243 289 aa12.23□□□□□ -0.45
ATG3-202ENST00000402314 FBXW12Q6X9E4 464 aa12.23□□□□□ -0.45
ATG3-202ENST00000402314 LHFPL1Q86WI0 220 aa12.23□□□□□ -0.45
ATG3-202ENST00000402314 ADPRHL1Q8NDY3 354 aa12.23□□□□□ -0.45
ATG3-202ENST00000402314 EMG1Q92979 244 aaKnown RBP12.23□□□□□ -0.45
ATG3-202ENST00000402314 ULBP2Q9BZM5 246 aa12.23□□□□□ -0.45
ATG3-202ENST00000402314 PLEKHJ1Q9NW61 149 aa12.23□□□□□ -0.45
ATG3-202ENST00000402314 SLC7A11Q9UPY5 501 aa12.23□□□□□ -0.45
ATG3-202ENST00000402314 IFNL4K9M1U5 179 aa12.22□□□□□ -0.45
ATG3-202ENST00000402314 TERTO14746 1132 aaKnown RBP12.22□□□□□ -0.45
ATG3-202ENST00000402314 SPRY1O43609 319 aaPredicted RBP12.22□□□□□ -0.45
ATG3-202ENST00000402314 TBPP20226 339 aa12.22□□□□□ -0.45
ATG3-202ENST00000402314 TUBG1P23258 451 aa12.22□□□□□ -0.45
ATG3-202ENST00000402314 SSR4P51571 173 aa12.22□□□□□ -0.45
ATG3-202ENST00000402314 TAF9Q16594 264 aa12.22□□□□□ -0.45
ATG3-202ENST00000402314 ABCA11PQ4W5N1 156 aa12.22□□□□□ -0.45
ATG3-202ENST00000402314 NECAP1Q8NC96 275 aa12.22□□□□□ -0.45
ATG3-202ENST00000402314 ABHD5Q8WTS1 349 aa12.22□□□□□ -0.45
ATG3-202ENST00000402314 SCGB3A2Q96PL1 93 aa12.22□□□□□ -0.45
ATG3-202ENST00000402314 MOB1AQ9H8S9 216 aa12.22□□□□□ -0.45
ATG3-202ENST00000402314 POMT1Q9Y6A1 747 aa12.22□□□□□ -0.45
ATG3-202ENST00000402314 A0A087WZY1 265 aa12.22□□□□□ -0.45
ATG3-202ENST00000402314 NSG1A0A0A6YYJ2 146 aa12.22□□□□□ -0.45
ATG3-202ENST00000402314 RBFOX3A6NFN3 312 aa12.22□□□□□ -0.45
ATG3-202ENST00000402314 M0R135 149 aa12.22□□□□□ -0.45
ATG3-202ENST00000402314 GSTP1P09211 210 aaKnown RBP12.22□□□□□ -0.45
ATG3-202ENST00000402314 TCEAL6Q6IPX3 200 aa12.22□□□□□ -0.45
ATG3-202ENST00000402314 STX12Q86Y82 276 aa12.22□□□□□ -0.45
ATG3-202ENST00000402314 HIST3H2BBQ8N257 126 aa12.22□□□□□ -0.45
ATG3-202ENST00000402314 OR10AD1Q8NGE0 317 aa12.22□□□□□ -0.45
ATG3-202ENST00000402314 NAT6Q93015 286 aa12.22□□□□□ -0.45
ATG3-202ENST00000402314 ZNF799Q96GE5 643 aa12.22□□□□□ -0.45
ATG3-202ENST00000402314 URM1Q9BTM9 101 aaKnown RBP12.22□□□□□ -0.45
ATG3-202ENST00000402314 OR5H1A6NKK0 313 aa12.21□□□□□ -0.45
ATG3-202ENST00000402314 ZNF774Q6NX45 483 aa12.21□□□□□ -0.45
ATG3-202ENST00000402314 AGBL5Q8NDL9 886 aa12.21□□□□□ -0.45
ATG3-202ENST00000402314 GJC3Q8NFK1 279 aa12.21□□□□□ -0.45
ATG3-202ENST00000402314 LYPD6BQ8NI32 183 aa12.21□□□□□ -0.45
ATG3-202ENST00000402314 PACRGQ96M98 296 aaPredicted RBP12.21□□□□□ -0.45
ATG3-202ENST00000402314 CDX2Q99626 313 aaPredicted RBP12.21□□□□□ -0.45
ATG3-202ENST00000402314 AK3Q9UIJ7 227 aa12.21□□□□□ -0.45
ATG3-202ENST00000402314 BDP1A6H8Y1 2624 aa12.21□□□□□ -0.45
ATG3-202ENST00000402314 FAM230AA0A1W2PPH8 454 aa12.21□□□□□ -0.45
ATG3-202ENST00000402314 SEC14L6B5MCN3 397 aa12.21□□□□□ -0.45
ATG3-202ENST00000402314 TSTD3H0UI37 97 aa12.21□□□□□ -0.45
ATG3-202ENST00000402314 GAPDHP04406 335 aaKnown RBP12.21□□□□□ -0.45
ATG3-202ENST00000402314 MMP7P09237 267 aaPredicted RBP12.21□□□□□ -0.45
ATG3-202ENST00000402314 OR5H8P0DN80 308 aa12.21□□□□□ -0.45
ATG3-202ENST00000402314 NR2C1P13056 603 aa12.21□□□□□ -0.45
ATG3-202ENST00000402314 B4GALT1P15291 398 aa12.21□□□□□ -0.45
ATG3-202ENST00000402314 RTN4IP1Q8WWV3 396 aaPredicted RBP12.21□□□□□ -0.45
ATG3-202ENST00000402314 PECRQ9BY49 303 aa12.21□□□□□ -0.45
ATG3-202ENST00000402314 LOC102723996A0A087X1L8 192 aa12.21□□□□□ -0.46
ATG3-202ENST00000402314 FIGNL2A6NMB9 653 aa12.21□□□□□ -0.46
ATG3-202ENST00000402314 TRAPPC6AO75865 159 aa12.21□□□□□ -0.46
ATG3-202ENST00000402314 CCL1P22362 96 aa12.21□□□□□ -0.46
ATG3-202ENST00000402314 PMELP40967 661 aa12.21□□□□□ -0.46
ATG3-202ENST00000402314 GRB2P62993 217 aaKnown RBP12.21□□□□□ -0.46
ATG3-202ENST00000402314 OR8G1Q15617 311 aa12.21□□□□□ -0.46
ATG3-202ENST00000402314 KCNMB1Q16558 191 aa12.21□□□□□ -0.46
ATG3-202ENST00000402314 TRIM61Q5EBN2 209 aa12.21□□□□□ -0.46
ATG3-202ENST00000402314 WDR25Q64LD2 544 aaPredicted RBP12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms