RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 LGI3Q8N145 548 aa6.68□□□□□ -1.34
HDAC9-201ENST00000401921 TMEM217Q8N7C4 229 aa6.68□□□□□ -1.34
HDAC9-201ENST00000401921 ZNF383Q8NA42 475 aa6.68□□□□□ -1.34
HDAC9-201ENST00000401921 OR10AD1Q8NGE0 317 aa6.68□□□□□ -1.34
HDAC9-201ENST00000401921 UBALD1Q8TB05 177 aa6.68□□□□□ -1.34
HDAC9-201ENST00000401921 Q96M66 194 aa6.68□□□□□ -1.34
HDAC9-201ENST00000401921 GGACTQ9BVM4 153 aa6.68□□□□□ -1.34
HDAC9-201ENST00000401921 SF3B5Q9BWJ5 86 aaKnown RBP6.68□□□□□ -1.34
HDAC9-201ENST00000401921 TLNRD1Q9H1K6 362 aa6.68□□□□□ -1.34
HDAC9-201ENST00000401921 GPR35Q9HC97 309 aa6.68□□□□□ -1.34
HDAC9-201ENST00000401921 RPS10P5Q9NQ39 176 aa6.68□□□□□ -1.34
HDAC9-201ENST00000401921 WASF3Q9UPY6 502 aa6.68□□□□□ -1.34
HDAC9-201ENST00000401921 V9GYS6 101 aa6.68□□□□□ -1.34
HDAC9-201ENST00000401921 RIF1Q5UIP0 2472 aaKnown RBP6.68□□□□□ -1.34
HDAC9-201ENST00000401921 TTC28Q96AY4 2481 aa6.68□□□□□ -1.34
HDAC9-201ENST00000401921 COL6A3P12111 3177 aa6.68□□□□□ -1.34
HDAC9-201ENST00000401921 MED13Q9UHV7 2174 aa6.68□□□□□ -1.34
HDAC9-201ENST00000401921 ZNF587BE7ETH6 402 aa6.67□□□□□ -1.34
HDAC9-201ENST00000401921 FCGR3AP08637 254 aa6.67□□□□□ -1.34
HDAC9-201ENST00000401921 CST2P09228 141 aa6.67□□□□□ -1.34
HDAC9-201ENST00000401921 MUC1P15941 1255 aaPredicted RBP6.67□□□□□ -1.34
HDAC9-201ENST00000401921 FUT3P21217 361 aa6.67□□□□□ -1.34
HDAC9-201ENST00000401921 NPBWR2P48146 333 aa6.67□□□□□ -1.34
HDAC9-201ENST00000401921 PJVKQ0ZLH3 352 aa6.67□□□□□ -1.34
HDAC9-201ENST00000401921 SPATA46Q5T0L3 261 aa6.67□□□□□ -1.34
HDAC9-201ENST00000401921 FAM89BQ8N5H3 189 aa6.67□□□□□ -1.34
HDAC9-201ENST00000401921 DEFB127Q9H1M4 99 aa6.67□□□□□ -1.34
HDAC9-201ENST00000401921 RGCCQ9H4X1 137 aa6.67□□□□□ -1.34
HDAC9-201ENST00000401921 PROK2Q9HC23 129 aa6.67□□□□□ -1.34
HDAC9-201ENST00000401921 SLC7A10Q9NS82 523 aa6.67□□□□□ -1.34
HDAC9-201ENST00000401921 CXorf65A6NEN9 183 aa6.67□□□□□ -1.34
HDAC9-201ENST00000401921 ZNF732B4DXR9 585 aa6.67□□□□□ -1.34
HDAC9-201ENST00000401921 PDCD6O75340 191 aa6.67□□□□□ -1.34
HDAC9-201ENST00000401921 JTBO76095 146 aa6.67□□□□□ -1.34
HDAC9-201ENST00000401921 CTSDP07339 412 aaPredicted RBP6.67□□□□□ -1.34
HDAC9-201ENST00000401921 S100A2P29034 98 aa6.67□□□□□ -1.34
HDAC9-201ENST00000401921 S100GP29377 79 aa6.67□□□□□ -1.34
HDAC9-201ENST00000401921 NTF4P34130 210 aa6.67□□□□□ -1.34
HDAC9-201ENST00000401921 ECI1P42126 302 aa6.67□□□□□ -1.34
HDAC9-201ENST00000401921 NOVA1P51513 510 aaKnown RBP6.67□□□□□ -1.34
HDAC9-201ENST00000401921 RAB1AP62820 205 aa6.67□□□□□ -1.34
HDAC9-201ENST00000401921 HGFACQ04756 655 aa6.67□□□□□ -1.34
HDAC9-201ENST00000401921 REC114Q7Z4M0 266 aa6.67□□□□□ -1.34
HDAC9-201ENST00000401921 P4HA3Q7Z4N8 544 aa6.67□□□□□ -1.34
HDAC9-201ENST00000401921 PPP1R32Q7Z5V6 425 aa6.67□□□□□ -1.34
HDAC9-201ENST00000401921 C5orf24Q7Z6I8 188 aa6.67□□□□□ -1.34
HDAC9-201ENST00000401921 DEFB123Q8N688 67 aa6.67□□□□□ -1.34
HDAC9-201ENST00000401921 DMBX1Q8NFW5 382 aa6.67□□□□□ -1.34
HDAC9-201ENST00000401921 FAM213BQ8TBF2 198 aa6.67□□□□□ -1.34
HDAC9-201ENST00000401921 EXTL1Q92935 676 aa6.67□□□□□ -1.34
HDAC9-201ENST00000401921 NUDT16L1Q9BRJ7 211 aaKnown RBP6.67□□□□□ -1.34
HDAC9-201ENST00000401921 TOLLIPQ9H0E2 274 aa6.67□□□□□ -1.34
HDAC9-201ENST00000401921 WNT5BQ9H1J7 359 aa6.67□□□□□ -1.34
HDAC9-201ENST00000401921 SLC2A9Q9NRM0 540 aa6.67□□□□□ -1.34
HDAC9-201ENST00000401921 FAM212BQ9NTI7 297 aaPredicted RBP6.67□□□□□ -1.34
HDAC9-201ENST00000401921 DEPPQ9NTK1 212 aa6.67□□□□□ -1.34
HDAC9-201ENST00000401921 FAM86C1Q9NVL1 165 aa6.67□□□□□ -1.34
HDAC9-201ENST00000401921 ST8SIA3O43173 380 aa6.67□□□□□ -1.34
HDAC9-201ENST00000401921 CNOT4O95628 575 aaKnown RBP6.67□□□□□ -1.34
HDAC9-201ENST00000401921 CELA3AP09093 270 aa6.67□□□□□ -1.34
HDAC9-201ENST00000401921 CD37P11049 281 aa6.67□□□□□ -1.34
HDAC9-201ENST00000401921 AADACP22760 399 aa6.67□□□□□ -1.34
HDAC9-201ENST00000401921 NFYBP25208 207 aa6.67□□□□□ -1.34
HDAC9-201ENST00000401921 HOXA6P31267 233 aa6.67□□□□□ -1.34
HDAC9-201ENST00000401921 NPBWR1P48145 328 aa6.67□□□□□ -1.34
HDAC9-201ENST00000401921 SSPNQ14714 243 aa6.67□□□□□ -1.34
HDAC9-201ENST00000401921 KRBOX4Q5JUW0 171 aa6.67□□□□□ -1.34
HDAC9-201ENST00000401921 SLC23A3Q6PIS1 610 aa6.67□□□□□ -1.34
HDAC9-201ENST00000401921 TIPARPQ7Z3E1 657 aaKnown RBP6.67□□□□□ -1.34
HDAC9-201ENST00000401921 OR51H1Q8NH63 302 aa6.67□□□□□ -1.34
HDAC9-201ENST00000401921 DTD1Q8TEA8 209 aa6.67□□□□□ -1.34
HDAC9-201ENST00000401921 APH1AQ96BI3 265 aa6.67□□□□□ -1.34
HDAC9-201ENST00000401921 C14orf79Q96F83 325 aa6.67□□□□□ -1.34
HDAC9-201ENST00000401921 AKR1E2Q96JD6 320 aa6.67□□□□□ -1.34
HDAC9-201ENST00000401921 RSRP1Q9BUV0 290 aa6.67□□□□□ -1.34
HDAC9-201ENST00000401921 NAA60Q9H7X0 242 aa6.67□□□□□ -1.34
HDAC9-201ENST00000401921 UQCC1Q9NVA1 299 aa6.67□□□□□ -1.34
HDAC9-201ENST00000401921 LPAR3Q9UBY5 353 aa6.67□□□□□ -1.34
HDAC9-201ENST00000401921 IGKV1-27A0A075B6S5 117 aa6.66□□□□□ -1.34
HDAC9-201ENST00000401921 A0A1W2PR80 420 aa6.66□□□□□ -1.34
HDAC9-201ENST00000401921 RNASEK-C17orf49H0YIS7 233 aa6.66□□□□□ -1.34
HDAC9-201ENST00000401921 TAAR5O14804 337 aa6.66□□□□□ -1.34
HDAC9-201ENST00000401921 SYNGR3O43761 229 aa6.66□□□□□ -1.34
HDAC9-201ENST00000401921 ONECUT2O95948 504 aa6.66□□□□□ -1.34
HDAC9-201ENST00000401921 CST4P01036 141 aa6.66□□□□□ -1.34
HDAC9-201ENST00000401921 SERPINA7P05543 415 aa6.66□□□□□ -1.34
HDAC9-201ENST00000401921 ZNF708P17019 499 aa6.66□□□□□ -1.34
HDAC9-201ENST00000401921 CTSSP25774 331 aa6.66□□□□□ -1.34
HDAC9-201ENST00000401921 APLNRP35414 380 aa6.66□□□□□ -1.34
HDAC9-201ENST00000401921 MAGEA5P43359 124 aa6.66□□□□□ -1.34
HDAC9-201ENST00000401921 FAM3AP98173 230 aa6.66□□□□□ -1.34
HDAC9-201ENST00000401921 HNF4GQ14541 408 aa6.66□□□□□ -1.34
HDAC9-201ENST00000401921 CALHM1Q8IU99 346 aa6.66□□□□□ -1.34
HDAC9-201ENST00000401921 ZNF561Q8N587 486 aa6.66□□□□□ -1.34
HDAC9-201ENST00000401921 POC1AQ8NBT0 407 aa6.66□□□□□ -1.34
HDAC9-201ENST00000401921 PSMF1Q92530 271 aa6.66□□□□□ -1.34
HDAC9-201ENST00000401921 MMP26Q9NRE1 261 aa6.66□□□□□ -1.34
HDAC9-201ENST00000401921 METTL1Q9UBP6 276 aaKnown RBP6.66□□□□□ -1.34
HDAC9-201ENST00000401921 FOXD3Q9UJU5 478 aaPredicted RBP6.66□□□□□ -1.34
HDAC9-201ENST00000401921 KCNS2Q9ULS6 477 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms