RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 Q56UQ5 140 aa15.96■□□□□ 0.15
COL18A1-204ENST00000400337 WFDC6Q9BQY6 131 aa15.96■□□□□ 0.15
COL18A1-204ENST00000400337 MAP1LC3BQ9GZQ8 125 aa15.96■□□□□ 0.15
COL18A1-204ENST00000400337 FAM186AA6NE01 2351 aa15.96■□□□□ 0.15
COL18A1-204ENST00000400337 A0A1W2PPC1 479 aa15.96■□□□□ 0.15
COL18A1-204ENST00000400337 B4E171 279 aa15.96■□□□□ 0.15
COL18A1-204ENST00000400337 DNPH1O43598 174 aa15.96■□□□□ 0.15
COL18A1-204ENST00000400337 PAX6P26367 422 aa15.96■□□□□ 0.15
COL18A1-204ENST00000400337 TSPAN7P41732 249 aa15.96■□□□□ 0.15
COL18A1-204ENST00000400337 FAM3AP98173 230 aa15.96■□□□□ 0.15
COL18A1-204ENST00000400337 MOGAT3Q86VF5 341 aa15.96■□□□□ 0.15
COL18A1-204ENST00000400337 TTTY12Q9BZ98 90 aa15.96■□□□□ 0.15
COL18A1-204ENST00000400337 CHST5Q9GZS9 411 aa15.96■□□□□ 0.15
COL18A1-204ENST00000400337 HPXP02790 462 aa15.96■□□□□ 0.14
COL18A1-204ENST00000400337 CLEC9AQ6UXN8 241 aa15.96■□□□□ 0.14
COL18A1-204ENST00000400337 LIAT1Q6ZQX7 453 aa15.95■□□□□ 0.14
COL18A1-204ENST00000400337 KIF13BQ9NQT8 1826 aa15.95■□□□□ 0.14
COL18A1-204ENST00000400337 C4orf51C9J302 202 aa15.95■□□□□ 0.14
COL18A1-204ENST00000400337 SLC31A2O15432 143 aa15.95■□□□□ 0.14
COL18A1-204ENST00000400337 FBXW9Q5XUX1 488 aa15.95■□□□□ 0.14
COL18A1-204ENST00000400337 SEC14L6B5MCN3 397 aa15.95■□□□□ 0.14
COL18A1-204ENST00000400337 LANCL1O43813 399 aa15.95■□□□□ 0.14
COL18A1-204ENST00000400337 DXOO77932 396 aaKnown RBP15.95■□□□□ 0.14
COL18A1-204ENST00000400337 S100A8P05109 93 aa15.95■□□□□ 0.14
COL18A1-204ENST00000400337 KIR2DS2P43631 304 aa15.95■□□□□ 0.14
COL18A1-204ENST00000400337 LIMS1P48059 325 aa15.95■□□□□ 0.14
COL18A1-204ENST00000400337 CHRDL1Q9BU40 450 aa15.95■□□□□ 0.14
COL18A1-204ENST00000400337 ZNF785A8K8V0 405 aa15.95■□□□□ 0.14
COL18A1-204ENST00000400337 UPK3AO75631 287 aa15.95■□□□□ 0.14
COL18A1-204ENST00000400337 MRPS11P82912 194 aaKnown RBP15.95■□□□□ 0.14
COL18A1-204ENST00000400337 KLF9Q13886 244 aaPredicted RBP15.95■□□□□ 0.14
COL18A1-204ENST00000400337 GGTLC2Q14390 218 aa15.95■□□□□ 0.14
COL18A1-204ENST00000400337 GAPTQ8N292 157 aa15.95■□□□□ 0.14
COL18A1-204ENST00000400337 SLC25A40Q8TBP6 338 aa15.95■□□□□ 0.14
COL18A1-204ENST00000400337 GAR1Q9NY12 217 aaKnown RBP15.95■□□□□ 0.14
COL18A1-204ENST00000400337 TRAV38-1A0A0B4J264 116 aa15.94■□□□□ 0.14
COL18A1-204ENST00000400337 TSPAN2O60636 221 aa15.94■□□□□ 0.14
COL18A1-204ENST00000400337 PPYP01298 95 aa15.94■□□□□ 0.14
COL18A1-204ENST00000400337 NGFRP08138 427 aa15.94■□□□□ 0.14
COL18A1-204ENST00000400337 ACSM6Q6P461 480 aa15.94■□□□□ 0.14
COL18A1-204ENST00000400337 TMEM18Q96B42 140 aa15.94■□□□□ 0.14
COL18A1-204ENST00000400337 NEIL1Q96FI4 390 aaPredicted RBP15.94■□□□□ 0.14
COL18A1-204ENST00000400337 TDRD15B5MCY1 1934 aaKnown RBP15.94■□□□□ 0.14
COL18A1-204ENST00000400337 LY86O95711 162 aa15.94■□□□□ 0.14
COL18A1-204ENST00000400337 SPTA1P02549 2419 aa15.94■□□□□ 0.14
COL18A1-204ENST00000400337 CD82P27701 267 aa15.94■□□□□ 0.14
COL18A1-204ENST00000400337 KIR3DL2P43630 455 aa15.94■□□□□ 0.14
COL18A1-204ENST00000400337 PRRX1P54821 245 aa15.94■□□□□ 0.14
COL18A1-204ENST00000400337 MIA3Q5JRA6 1907 aa15.94■□□□□ 0.14
COL18A1-204ENST00000400337 RND1Q92730 232 aa15.94■□□□□ 0.14
COL18A1-204ENST00000400337 J3QT63 122 aa15.94■□□□□ 0.14
COL18A1-204ENST00000400337 PMELP40967 661 aa15.94■□□□□ 0.14
COL18A1-204ENST00000400337 SLC25A22Q9H936 323 aa15.94■□□□□ 0.14
COL18A1-204ENST00000400337 FKBP11Q9NYL4 201 aa15.94■□□□□ 0.14
COL18A1-204ENST00000400337 RAB1BQ9H0U4 201 aa15.94■□□□□ 0.14
COL18A1-204ENST00000400337 CCL28Q9NRJ3 127 aa15.94■□□□□ 0.14
COL18A1-204ENST00000400337 TRAV39A0A0B4J263 110 aa15.93■□□□□ 0.14
COL18A1-204ENST00000400337 M0QZ24 198 aa15.93■□□□□ 0.14
COL18A1-204ENST00000400337 TTRP02766 147 aa15.93■□□□□ 0.14
COL18A1-204ENST00000400337 DYRK2Q92630 601 aa15.93■□□□□ 0.14
COL18A1-204ENST00000400337 OOEPA6NGQ2 149 aa15.93■□□□□ 0.14
COL18A1-204ENST00000400337 CRHP06850 196 aa15.93■□□□□ 0.14
COL18A1-204ENST00000400337 RD3LP0DJH9 198 aa15.93■□□□□ 0.14
COL18A1-204ENST00000400337 INPP5JQ15735 1006 aaPredicted RBP15.93■□□□□ 0.14
COL18A1-204ENST00000400337 C12orf57Q99622 126 aa15.93■□□□□ 0.14
COL18A1-204ENST00000400337 ZP4Q12836 540 aa15.93■□□□□ 0.14
COL18A1-204ENST00000400337 PHYHIPLQ96FC7 376 aa15.93■□□□□ 0.14
COL18A1-204ENST00000400337 A0A1W2PRD5 423 aa15.93■□□□□ 0.14
COL18A1-204ENST00000400337 A0A1W2PRF3 423 aa15.93■□□□□ 0.14
COL18A1-204ENST00000400337 A0A1W2PRM7 423 aa15.93■□□□□ 0.14
COL18A1-204ENST00000400337 SLC25A42Q86VD7 318 aa15.93■□□□□ 0.14
COL18A1-204ENST00000400337 OR4S2Q8NH73 311 aa15.93■□□□□ 0.14
COL18A1-204ENST00000400337 PCDHGA9Q9Y5G4 932 aaKnown RBP15.93■□□□□ 0.14
COL18A1-204ENST00000400337 TAF1LQ8IZX4 1826 aa15.93■□□□□ 0.14
COL18A1-204ENST00000400337 CTSBP07858 339 aa15.93■□□□□ 0.14
COL18A1-204ENST00000400337 NQO2P16083 231 aa15.93■□□□□ 0.14
COL18A1-204ENST00000400337 ZXDCQ2QGD7 858 aaPredicted RBP15.93■□□□□ 0.14
COL18A1-204ENST00000400337 MDP1Q86V88 176 aa15.93■□□□□ 0.14
COL18A1-204ENST00000400337 OR5A2Q8NGI9 324 aa15.93■□□□□ 0.14
COL18A1-204ENST00000400337 RAB1CQ92928 201 aa15.93■□□□□ 0.14
COL18A1-204ENST00000400337 OR1A1Q9P1Q5 309 aa15.93■□□□□ 0.14
COL18A1-204ENST00000400337 CYB5R1Q9UHQ9 305 aa15.93■□□□□ 0.14
COL18A1-204ENST00000400337 SAP30LQ9HAJ7 183 aa15.92■□□□□ 0.14
COL18A1-204ENST00000400337 MSL2Q9HCI7 577 aa15.92■□□□□ 0.14
COL18A1-204ENST00000400337 ETFRF1Q6IPR1 90 aa15.92■□□□□ 0.14
COL18A1-204ENST00000400337 R3HDM4Q96D70 268 aa15.92■□□□□ 0.14
COL18A1-204ENST00000400337 GMPPAQ96IJ6 420 aaPredicted RBP15.92■□□□□ 0.14
COL18A1-204ENST00000400337 TMEM147Q9BVK8 224 aa15.92■□□□□ 0.14
COL18A1-204ENST00000400337 DOCK3Q8IZD9 2030 aa15.92■□□□□ 0.14
COL18A1-204ENST00000400337 IGHV1-45A0A0A0MS14 117 aa15.92■□□□□ 0.14
COL18A1-204ENST00000400337 A0A1W2PN81 502 aa15.92■□□□□ 0.14
COL18A1-204ENST00000400337 SYNGR2O43760 224 aa15.92■□□□□ 0.14
COL18A1-204ENST00000400337 CHRNA7P36544 502 aa15.92■□□□□ 0.14
COL18A1-204ENST00000400337 RAB33BQ9H082 229 aa15.92■□□□□ 0.14
COL18A1-204ENST00000400337 AAMDCQ9H7C9 122 aa15.92■□□□□ 0.14
COL18A1-204ENST00000400337 SLC2A9Q9NRM0 540 aa15.92■□□□□ 0.14
COL18A1-204ENST00000400337 MRPS18BQ9Y676 258 aaKnown RBP15.92■□□□□ 0.14
COL18A1-204ENST00000400337 DYNLT3P51808 116 aa15.92■□□□□ 0.14
COL18A1-204ENST00000400337 FGF8P55075 233 aaPredicted RBP15.92■□□□□ 0.14
COL18A1-204ENST00000400337 MPV17LQ2QL34 196 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms