RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 RGP1Q92546 391 aaPredicted RBP12.13□□□□□ -0.47
VAPA-202ENST00000400000 PARP11Q9NR21 331 aa12.13□□□□□ -0.47
VAPA-202ENST00000400000 SLC7A10Q9NS82 523 aa12.13□□□□□ -0.47
VAPA-202ENST00000400000 A0A1B0GUH1 482 aa12.13□□□□□ -0.47
VAPA-202ENST00000400000 CDC42EP2O14613 210 aa12.13□□□□□ -0.47
VAPA-202ENST00000400000 GFRA3O60609 400 aa12.13□□□□□ -0.47
VAPA-202ENST00000400000 FPR2P25090 351 aa12.13□□□□□ -0.47
VAPA-202ENST00000400000 MGAT2Q10469 447 aa12.13□□□□□ -0.47
VAPA-202ENST00000400000 TGIF1Q15583 401 aa12.13□□□□□ -0.47
VAPA-202ENST00000400000 FOXB2Q5VYV0 432 aa12.13□□□□□ -0.47
VAPA-202ENST00000400000 OR10D4PQ8NGN7 298 aa12.13□□□□□ -0.47
VAPA-202ENST00000400000 TNRC6CQ9HCJ0 1690 aaKnown RBP12.13□□□□□ -0.47
VAPA-202ENST00000400000 TEX50A0A1B0GTY4 177 aa12.13□□□□□ -0.47
VAPA-202ENST00000400000 MAP1LC3B2A6NCE7 125 aa12.13□□□□□ -0.47
VAPA-202ENST00000400000 PNLIPRP3Q17RR3 467 aa12.13□□□□□ -0.47
VAPA-202ENST00000400000 FAM24BQ8N5W8 94 aa12.13□□□□□ -0.47
VAPA-202ENST00000400000 GPBAR1Q8TDU6 330 aa12.13□□□□□ -0.47
VAPA-202ENST00000400000 C10orf90Q96M02 699 aa12.13□□□□□ -0.47
VAPA-202ENST00000400000 C12orf57Q99622 126 aa12.13□□□□□ -0.47
VAPA-202ENST00000400000 HDHD3Q9BSH5 251 aaPredicted RBP12.13□□□□□ -0.47
VAPA-202ENST00000400000 MAP1LC3BQ9GZQ8 125 aa12.13□□□□□ -0.47
VAPA-202ENST00000400000 AKIRIN1Q9H9L7 192 aaPredicted RBP12.13□□□□□ -0.47
VAPA-202ENST00000400000 RASL12Q9NYN1 266 aa12.13□□□□□ -0.47
VAPA-202ENST00000400000 LAMB1P07942 1786 aa12.13□□□□□ -0.47
VAPA-202ENST00000400000 CD81P60033 236 aa12.13□□□□□ -0.47
VAPA-202ENST00000400000 HOXA4Q00056 320 aaPredicted RBP12.13□□□□□ -0.47
VAPA-202ENST00000400000 SIGLEC14Q08ET2 396 aa12.13□□□□□ -0.47
VAPA-202ENST00000400000 SKP2Q13309 424 aa12.13□□□□□ -0.47
VAPA-202ENST00000400000 OR8A1Q8NGG7 326 aa12.13□□□□□ -0.47
VAPA-202ENST00000400000 CEACAM3P40198 252 aa12.13□□□□□ -0.47
VAPA-202ENST00000400000 MVDP53602 400 aa12.13□□□□□ -0.47
VAPA-202ENST00000400000 LOXL3P58215 753 aa12.13□□□□□ -0.47
VAPA-202ENST00000400000 FAHD1Q6P587 224 aa12.13□□□□□ -0.47
VAPA-202ENST00000400000 PRNTQ86SH4 94 aa12.13□□□□□ -0.47
VAPA-202ENST00000400000 ZNF547Q8IVP9 402 aa12.13□□□□□ -0.47
VAPA-202ENST00000400000 Q8IYB0 196 aa12.13□□□□□ -0.47
VAPA-202ENST00000400000 NTNG2Q96CW9 530 aa12.13□□□□□ -0.47
VAPA-202ENST00000400000 C19orf43Q9BQ61 176 aa12.13□□□□□ -0.47
VAPA-202ENST00000400000 FGF20Q9NP95 211 aaPredicted RBP12.13□□□□□ -0.47
VAPA-202ENST00000400000 SLC23A3Q6PIS1 610 aa12.12□□□□□ -0.47
VAPA-202ENST00000400000 SCN2AQ99250 2005 aa12.12□□□□□ -0.47
VAPA-202ENST00000400000 IL11P20809 199 aa12.12□□□□□ -0.47
VAPA-202ENST00000400000 IGFBP7Q16270 282 aa12.12□□□□□ -0.47
VAPA-202ENST00000400000 DTD1Q8TEA8 209 aa12.12□□□□□ -0.47
VAPA-202ENST00000400000 CTAG2O75638 210 aa12.12□□□□□ -0.47
VAPA-202ENST00000400000 GCSHP23434 173 aa12.12□□□□□ -0.47
VAPA-202ENST00000400000 RAB7AP51149 207 aa12.12□□□□□ -0.47
VAPA-202ENST00000400000 PRRX2Q99811 253 aa12.12□□□□□ -0.47
VAPA-202ENST00000400000 HPXP02790 462 aa12.12□□□□□ -0.47
VAPA-202ENST00000400000 FAM87AP0C7U9 286 aa12.12□□□□□ -0.47
VAPA-202ENST00000400000 MRPL54Q6P161 138 aaKnown RBP12.12□□□□□ -0.47
VAPA-202ENST00000400000 TMEM171Q8WVE6 324 aa12.12□□□□□ -0.47
VAPA-202ENST00000400000 SPSB1Q96BD6 273 aa12.12□□□□□ -0.47
VAPA-202ENST00000400000 MCM3APO60318 1980 aa12.12□□□□□ -0.47
VAPA-202ENST00000400000 M0R2Z0 102 aa12.12□□□□□ -0.47
VAPA-202ENST00000400000 SPINT1O43278 529 aa12.12□□□□□ -0.47
VAPA-202ENST00000400000 PMELP40967 661 aa12.12□□□□□ -0.47
VAPA-202ENST00000400000 MMP15P51511 669 aa12.12□□□□□ -0.47
VAPA-202ENST00000400000 ZNF680Q8NEM1 530 aa12.12□□□□□ -0.47
VAPA-202ENST00000400000 ANGPTL6Q8NI99 470 aa12.12□□□□□ -0.47
VAPA-202ENST00000400000 SEMA7AO75326 666 aa12.11□□□□□ -0.47
VAPA-202ENST00000400000 ZNF880Q6PDB4 577 aa12.11□□□□□ -0.47
VAPA-202ENST00000400000 OVCH2Q7RTZ1 564 aa12.11□□□□□ -0.47
VAPA-202ENST00000400000 LANCL1O43813 399 aa12.11□□□□□ -0.47
VAPA-202ENST00000400000 NAT2P11245 290 aa12.11□□□□□ -0.47
VAPA-202ENST00000400000 COL10A1Q03692 680 aa12.11□□□□□ -0.47
VAPA-202ENST00000400000 TDRD6O60522 2096 aaKnown RBP12.11□□□□□ -0.47
VAPA-202ENST00000400000 GSTZ1O43708 216 aaPredicted RBP12.11□□□□□ -0.47
VAPA-202ENST00000400000 IGKV3-20P01619 116 aa12.11□□□□□ -0.47
VAPA-202ENST00000400000 DAOP14920 347 aa12.11□□□□□ -0.47
VAPA-202ENST00000400000 SRD5A2P31213 254 aa12.11□□□□□ -0.47
VAPA-202ENST00000400000 MPV17LQ2QL34 196 aa12.11□□□□□ -0.47
VAPA-202ENST00000400000 NTMQ9P121 344 aa12.11□□□□□ -0.47
VAPA-202ENST00000400000 SCGB1D4Q6XE38 83 aa12.11□□□□□ -0.47
VAPA-202ENST00000400000 RNF165Q6ZSG1 346 aa12.11□□□□□ -0.47
VAPA-202ENST00000400000 MDP1Q86V88 176 aa12.11□□□□□ -0.47
VAPA-202ENST00000400000 EID2BQ96D98 161 aa12.11□□□□□ -0.47
VAPA-202ENST00000400000 TRAV1-2A0A0B4J238 106 aa12.11□□□□□ -0.47
VAPA-202ENST00000400000 GLDNQ6ZMI3 551 aaPredicted RBP12.11□□□□□ -0.47
VAPA-202ENST00000400000 LIMS2Q7Z4I7 341 aa12.11□□□□□ -0.47
VAPA-202ENST00000400000 OR8I2Q8N0Y5 310 aa12.11□□□□□ -0.47
VAPA-202ENST00000400000 OR5A2Q8NGI9 324 aa12.11□□□□□ -0.47
VAPA-202ENST00000400000 DOCK5Q9H7D0 1870 aa12.11□□□□□ -0.47
VAPA-202ENST00000400000 NKX2-2O95096 273 aa12.11□□□□□ -0.47
VAPA-202ENST00000400000 BRS3P32247 399 aa12.11□□□□□ -0.47
VAPA-202ENST00000400000 GAPTQ8N292 157 aa12.11□□□□□ -0.47
VAPA-202ENST00000400000 OR4X1Q8NH49 305 aa12.11□□□□□ -0.47
VAPA-202ENST00000400000 GUCD1Q96NT3 240 aa12.11□□□□□ -0.47
VAPA-202ENST00000400000 NAA60Q9H7X0 242 aa12.11□□□□□ -0.47
VAPA-202ENST00000400000 THYN1Q9P016 225 aa12.11□□□□□ -0.47
VAPA-202ENST00000400000 PNPP00491 289 aa12.1□□□□□ -0.47
VAPA-202ENST00000400000 RPL29P47914 159 aaKnown RBP12.1□□□□□ -0.47
VAPA-202ENST00000400000 DHRS2Q13268 280 aa12.1□□□□□ -0.47
VAPA-202ENST00000400000 MMDQ15546 238 aa12.1□□□□□ -0.47
VAPA-202ENST00000400000 CCL28Q9NRJ3 127 aa12.1□□□□□ -0.47
VAPA-202ENST00000400000 ZNF831Q5JPB2 1677 aa12.1□□□□□ -0.47
VAPA-202ENST00000400000 KNTC1P50748 2209 aa12.1□□□□□ -0.47
VAPA-202ENST00000400000 ZNF207O43670 478 aaKnown RBP12.1□□□□□ -0.47
VAPA-202ENST00000400000 HLA-GP17693 338 aa12.1□□□□□ -0.47
VAPA-202ENST00000400000 WNT3P56703 355 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms