RNA–Protein interactions for RNA: ENST00000398604.2

PCDHGA8-201, Transcript of protocadherin gamma subfamily A, 8, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA8, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8-201ENST00000398604 ARFGEF3Q5TH69 2177 aa10.15□□□□□ -0.79
PCDHGA8-201ENST00000398604 SP1P08047 785 aa10.14□□□□□ -0.79
PCDHGA8-201ENST00000398604 SNRPCP09234 159 aaKnown RBP10.14□□□□□ -0.79
PCDHGA8-201ENST00000398604 TMEM211Q6ICI0 200 aa10.14□□□□□ -0.79
PCDHGA8-201ENST00000398604 NHLRC1Q6VVB1 395 aa10.14□□□□□ -0.79
PCDHGA8-201ENST00000398604 ZNF574Q6ZN55 896 aaPredicted RBP10.14□□□□□ -0.79
PCDHGA8-201ENST00000398604 OR5C1Q8NGR4 320 aa10.14□□□□□ -0.79
PCDHGA8-201ENST00000398604 MS4A3Q96HJ5 214 aa10.14□□□□□ -0.79
PCDHGA8-201ENST00000398604 ZNF488Q96MN9 340 aa10.14□□□□□ -0.79
PCDHGA8-201ENST00000398604 IL17BQ9UHF5 180 aa10.14□□□□□ -0.79
PCDHGA8-201ENST00000398604 TRAV8-7A0A075B6U6 113 aa10.14□□□□□ -0.79
PCDHGA8-201ENST00000398604 A0A1W2PPE3 182 aa10.14□□□□□ -0.79
PCDHGA8-201ENST00000398604 RD3LP0DJH9 198 aa10.14□□□□□ -0.79
PCDHGA8-201ENST00000398604 BPIFB3P59826 476 aa10.14□□□□□ -0.79
PCDHGA8-201ENST00000398604 POLR2GP62487 172 aaKnown RBP eCLIP10.14□□□□□ -0.79
PCDHGA8-201ENST00000398604 ST3GAL2Q16842 350 aa10.14□□□□□ -0.79
PCDHGA8-201ENST00000398604 BHLHA15Q7RTS1 189 aaPredicted RBP10.14□□□□□ -0.79
PCDHGA8-201ENST00000398604 SLC38A6Q8IZM9 456 aa10.14□□□□□ -0.79
PCDHGA8-201ENST00000398604 SLC25A40Q8TBP6 338 aa10.14□□□□□ -0.79
PCDHGA8-201ENST00000398604 ASB10Q8WXI3 467 aa10.14□□□□□ -0.79
PCDHGA8-201ENST00000398604 LOXL4Q96JB6 756 aa10.14□□□□□ -0.79
PCDHGA8-201ENST00000398604 OR2J1Q9GZK6 312 aa10.14□□□□□ -0.79
PCDHGA8-201ENST00000398604 V9GYH0 126 aa10.14□□□□□ -0.79
PCDHGA8-201ENST00000398604 SH2D7A6NKC9 451 aaPredicted RBP10.14□□□□□ -0.79
PCDHGA8-201ENST00000398604 TRIM77I1YAP6 450 aa10.14□□□□□ -0.79
PCDHGA8-201ENST00000398604 NDUFB6O95139 128 aa10.14□□□□□ -0.79
PCDHGA8-201ENST00000398604 GP1BAP07359 652 aa10.14□□□□□ -0.79
PCDHGA8-201ENST00000398604 HTN1P15515 57 aa10.14□□□□□ -0.79
PCDHGA8-201ENST00000398604 ORM2P19652 201 aa10.14□□□□□ -0.79
PCDHGA8-201ENST00000398604 MRPS11P82912 194 aaKnown RBP10.14□□□□□ -0.79
PCDHGA8-201ENST00000398604 SPNS3Q6ZMD2 512 aa10.14□□□□□ -0.79
PCDHGA8-201ENST00000398604 SSX7Q7RTT5 188 aa10.14□□□□□ -0.79
PCDHGA8-201ENST00000398604 OR13D1Q8NGV5 346 aa10.14□□□□□ -0.79
PCDHGA8-201ENST00000398604 ZPLD1Q8TCW7 415 aa10.14□□□□□ -0.79
PCDHGA8-201ENST00000398604 BLNKQ8WV28 456 aa10.14□□□□□ -0.79
PCDHGA8-201ENST00000398604 DYRK2Q92630 601 aa10.14□□□□□ -0.79
PCDHGA8-201ENST00000398604 TMEM56Q96MV1 263 aa10.14□□□□□ -0.79
PCDHGA8-201ENST00000398604 CMTM3Q96MX0 182 aa10.14□□□□□ -0.79
PCDHGA8-201ENST00000398604 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.14□□□□□ -0.79
PCDHGA8-201ENST00000398604 RYDENQ9NUL5 291 aaKnown RBP10.14□□□□□ -0.79
PCDHGA8-201ENST00000398604 GCM2O75603 506 aaPredicted RBP10.14□□□□□ -0.79
PCDHGA8-201ENST00000398604 IGKV1D-16P01601 117 aa10.14□□□□□ -0.79
PCDHGA8-201ENST00000398604 C21orf58P58505 322 aa10.14□□□□□ -0.79
PCDHGA8-201ENST00000398604 FAM3AP98173 230 aa10.14□□□□□ -0.79
PCDHGA8-201ENST00000398604 ZNF528Q3MIS6 628 aa10.14□□□□□ -0.79
PCDHGA8-201ENST00000398604 OR2M3Q8NG83 312 aa10.14□□□□□ -0.79
PCDHGA8-201ENST00000398604 MED30Q96HR3 178 aa10.14□□□□□ -0.79
PCDHGA8-201ENST00000398604 UQCC1Q9NVA1 299 aa10.14□□□□□ -0.79
PCDHGA8-201ENST00000398604 IGHV3OR15-7A0A075B7D8 119 aa10.13□□□□□ -0.79
PCDHGA8-201ENST00000398604 SEC14L6B5MCN3 397 aa10.13□□□□□ -0.79
PCDHGA8-201ENST00000398604 LIFP15018 202 aa10.13□□□□□ -0.79
PCDHGA8-201ENST00000398604 FABP4P15090 132 aa10.13□□□□□ -0.79
PCDHGA8-201ENST00000398604 PRSS42Q7Z5A4 293 aa10.13□□□□□ -0.79
PCDHGA8-201ENST00000398604 TGIF2LXQ8IUE1 241 aa10.13□□□□□ -0.79
PCDHGA8-201ENST00000398604 LSMEM1Q8N8F7 131 aa10.13□□□□□ -0.79
PCDHGA8-201ENST00000398604 ZNRF4Q8WWF5 429 aa10.13□□□□□ -0.79
PCDHGA8-201ENST00000398604 TMEM208Q9BTX3 173 aa10.13□□□□□ -0.79
PCDHGA8-201ENST00000398604 NXF2Q9GZY0 626 aaKnown RBP10.13□□□□□ -0.79
PCDHGA8-201ENST00000398604 MIXL1Q9H2W2 232 aa10.13□□□□□ -0.79
PCDHGA8-201ENST00000398604 GPR35Q9HC97 309 aa10.13□□□□□ -0.79
PCDHGA8-201ENST00000398604 C16orf97H3BN30 126 aa10.13□□□□□ -0.79
PCDHGA8-201ENST00000398604 IL11P20809 199 aa10.13□□□□□ -0.79
PCDHGA8-201ENST00000398604 IRF3Q14653 427 aa10.13□□□□□ -0.79
PCDHGA8-201ENST00000398604 DHRS7BQ6IAN0 325 aaPredicted RBP10.13□□□□□ -0.79
PCDHGA8-201ENST00000398604 BTNL8Q6UX41 500 aa10.13□□□□□ -0.79
PCDHGA8-201ENST00000398604 AKR1E2Q96JD6 320 aa10.13□□□□□ -0.79
PCDHGA8-201ENST00000398604 TMUB1Q9BVT8 246 aa10.13□□□□□ -0.79
PCDHGA8-201ENST00000398604 OR5B21A6NL26 309 aa10.13□□□□□ -0.79
PCDHGA8-201ENST00000398604 CDX4O14627 284 aaPredicted RBP10.13□□□□□ -0.79
PCDHGA8-201ENST00000398604 IGHA1P01876 353 aa10.13□□□□□ -0.79
PCDHGA8-201ENST00000398604 OR4A8P0C604 315 aa10.13□□□□□ -0.79
PCDHGA8-201ENST00000398604 NAT1P18440 290 aa10.13□□□□□ -0.79
PCDHGA8-201ENST00000398604 REG1BP48304 166 aa10.13□□□□□ -0.79
PCDHGA8-201ENST00000398604 FNDC7Q5VTL7 733 aa10.13□□□□□ -0.79
PCDHGA8-201ENST00000398604 GGNBP1Q5YKI7 109 aa10.13□□□□□ -0.79
PCDHGA8-201ENST00000398604 C11orf87Q6NUJ2 197 aa10.13□□□□□ -0.79
PCDHGA8-201ENST00000398604 GLDNQ6ZMI3 551 aaPredicted RBP10.13□□□□□ -0.79
PCDHGA8-201ENST00000398604 TCTE3Q8IZS6 198 aa10.13□□□□□ -0.79
PCDHGA8-201ENST00000398604 NKX6-2Q9C056 277 aaPredicted RBP10.13□□□□□ -0.79
PCDHGA8-201ENST00000398604 OR4C45A6NMZ5 311 aa10.13□□□□□ -0.79
PCDHGA8-201ENST00000398604 DUS4LO95620 317 aaKnown RBP10.13□□□□□ -0.79
PCDHGA8-201ENST00000398604 ZNF79Q15937 498 aa10.13□□□□□ -0.79
PCDHGA8-201ENST00000398604 TNXAQ16473 311 aa10.13□□□□□ -0.79
PCDHGA8-201ENST00000398604 ZNF260Q3ZCT1 412 aa10.13□□□□□ -0.79
PCDHGA8-201ENST00000398604 CD300LDQ6UXZ3 194 aa10.13□□□□□ -0.79
PCDHGA8-201ENST00000398604 POMT1Q9Y6A1 747 aa10.13□□□□□ -0.79
PCDHGA8-201ENST00000398604 PIGYQ3MUY2 71 aa10.12□□□□□ -0.79
PCDHGA8-201ENST00000398604 SLC25A30Q5SVS4 291 aa10.12□□□□□ -0.79
PCDHGA8-201ENST00000398604 TMEM251Q8N6I4 163 aa10.12□□□□□ -0.79
PCDHGA8-201ENST00000398604 NIT2Q9NQR4 276 aa10.12□□□□□ -0.79
PCDHGA8-201ENST00000398604 SLC7A10Q9NS82 523 aa10.12□□□□□ -0.79
PCDHGA8-201ENST00000398604 SLC35D1Q9NTN3 355 aa10.12□□□□□ -0.79
PCDHGA8-201ENST00000398604 MPC1Q9Y5U8 109 aa10.12□□□□□ -0.79
PCDHGA8-201ENST00000398604 C3orf85A0A1B0GTC6 90 aa10.12□□□□□ -0.79
PCDHGA8-201ENST00000398604 C17orf51A8MQB3 221 aa10.12□□□□□ -0.79
PCDHGA8-201ENST00000398604 NPIPB8E9PQR5 432 aa10.12□□□□□ -0.79
PCDHGA8-201ENST00000398604 LTBRP36941 435 aa10.12□□□□□ -0.79
PCDHGA8-201ENST00000398604 PAX5Q02548 391 aa10.12□□□□□ -0.79
PCDHGA8-201ENST00000398604 DMKNQ6E0U4 476 aaPredicted RBP10.12□□□□□ -0.79
PCDHGA8-201ENST00000398604 ZNF721Q8TF20 911 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms