RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 OR2B8PP59922 312 aa12.44□□□□□ -0.42
PCDHGA11-201ENST00000398587 ENDOGQ14249 297 aaKnown RBP12.44□□□□□ -0.42
PCDHGA11-201ENST00000398587 STPG1Q5TH74 334 aa12.44□□□□□ -0.42
PCDHGA11-201ENST00000398587 OR2D2Q9H210 308 aa12.44□□□□□ -0.42
PCDHGA11-201ENST00000398587 ARHGEF17Q96PE2 2063 aaPredicted RBP12.44□□□□□ -0.42
PCDHGA11-201ENST00000398587 hADV38S2A0JD32 116 aa12.44□□□□□ -0.42
PCDHGA11-201ENST00000398587 HSBP1L1C9JCN9 74 aa12.44□□□□□ -0.42
PCDHGA11-201ENST00000398587 RGS13O14921 159 aa12.44□□□□□ -0.42
PCDHGA11-201ENST00000398587 OR7C2O60412 319 aa12.44□□□□□ -0.42
PCDHGA11-201ENST00000398587 TIAF1O95411 115 aa12.44□□□□□ -0.42
PCDHGA11-201ENST00000398587 SLC25A6P12236 298 aa12.44□□□□□ -0.42
PCDHGA11-201ENST00000398587 BCL3P20749 454 aa12.44□□□□□ -0.42
PCDHGA11-201ENST00000398587 RIPPLY2Q5TAB7 128 aa12.44□□□□□ -0.42
PCDHGA11-201ENST00000398587 UBE2L5PA0A1B0GUS4 154 aa12.44□□□□□ -0.42
PCDHGA11-201ENST00000398587 FAM24AA6NFZ4 105 aa12.44□□□□□ -0.42
PCDHGA11-201ENST00000398587 DEFB108AA8MXU0 73 aa12.44□□□□□ -0.42
PCDHGA11-201ENST00000398587 VMA21Q3ZAQ7 101 aa12.44□□□□□ -0.42
PCDHGA11-201ENST00000398587 TIGITQ495A1 244 aa12.44□□□□□ -0.42
PCDHGA11-201ENST00000398587 PATZ1Q9HBE1 687 aaKnown RBP12.44□□□□□ -0.42
PCDHGA11-201ENST00000398587 MMP26Q9NRE1 261 aa12.44□□□□□ -0.42
PCDHGA11-201ENST00000398587 DOCK4Q8N1I0 1966 aa12.44□□□□□ -0.42
PCDHGA11-201ENST00000398587 C3orf80F5H4A9 247 aa12.44□□□□□ -0.42
PCDHGA11-201ENST00000398587 ZP3P21754 424 aa12.44□□□□□ -0.42
PCDHGA11-201ENST00000398587 NDUFA6P56556 154 aa12.44□□□□□ -0.42
PCDHGA11-201ENST00000398587 GUK1Q16774 197 aa12.44□□□□□ -0.42
PCDHGA11-201ENST00000398587 PIGYQ3MUY2 71 aa12.44□□□□□ -0.42
PCDHGA11-201ENST00000398587 MIDNQ504T8 468 aa12.44□□□□□ -0.42
PCDHGA11-201ENST00000398587 FDX2Q6P4F2 183 aa12.44□□□□□ -0.42
PCDHGA11-201ENST00000398587 APCDD1LQ8NCL9 501 aa12.44□□□□□ -0.42
PCDHGA11-201ENST00000398587 CXorf58Q96LI9 332 aa12.44□□□□□ -0.42
PCDHGA11-201ENST00000398587 TMEM229AB2RXF0 380 aa12.43□□□□□ -0.42
PCDHGA11-201ENST00000398587 TSTD3H0UI37 97 aa12.43□□□□□ -0.42
PCDHGA11-201ENST00000398587 UBE2G1P62253 170 aa12.43□□□□□ -0.42
PCDHGA11-201ENST00000398587 FOXO1Q12778 655 aa12.43□□□□□ -0.42
PCDHGA11-201ENST00000398587 SLC25A40Q8TBP6 338 aa12.43□□□□□ -0.42
PCDHGA11-201ENST00000398587 SLC2A9Q9NRM0 540 aa12.43□□□□□ -0.42
PCDHGA11-201ENST00000398587 MEX3AA1L020 520 aaKnown RBP12.43□□□□□ -0.42
PCDHGA11-201ENST00000398587 TBC1D26Q86UD7 250 aa12.43□□□□□ -0.42
PCDHGA11-201ENST00000398587 MDP1Q86V88 176 aa12.43□□□□□ -0.42
PCDHGA11-201ENST00000398587 ZBTB44Q8NCP5 570 aa12.43□□□□□ -0.42
PCDHGA11-201ENST00000398587 SLC25A38Q96DW6 304 aa12.43□□□□□ -0.42
PCDHGA11-201ENST00000398587 GHITMQ9H3K2 345 aa12.43□□□□□ -0.42
PCDHGA11-201ENST00000398587 ESRP2Q9H6T0 727 aaKnown RBP12.43□□□□□ -0.42
PCDHGA11-201ENST00000398587 PRDM6Q9NQX0 595 aa12.43□□□□□ -0.42
PCDHGA11-201ENST00000398587 LHFPL6Q9Y693 200 aa12.43□□□□□ -0.42
PCDHGA11-201ENST00000398587 TGFBR3LH3BV60 316 aa12.43□□□□□ -0.42
PCDHGA11-201ENST00000398587 SCO1O75880 301 aa12.43□□□□□ -0.42
PCDHGA11-201ENST00000398587 SP9P0CG40 484 aa12.43□□□□□ -0.42
PCDHGA11-201ENST00000398587 TMEM33P57088 247 aa12.43□□□□□ -0.42
PCDHGA11-201ENST00000398587 BPIFB3P59826 476 aa12.43□□□□□ -0.42
PCDHGA11-201ENST00000398587 FLI1Q01543 452 aaPredicted RBP12.43□□□□□ -0.42
PCDHGA11-201ENST00000398587 OR10AD1Q8NGE0 317 aa12.43□□□□□ -0.42
PCDHGA11-201ENST00000398587 GAL3ST2Q9H3Q3 398 aa12.43□□□□□ -0.42
PCDHGA11-201ENST00000398587 NEUROG3Q9Y4Z2 214 aa12.43□□□□□ -0.42
PCDHGA11-201ENST00000398587 SEMA7AO75326 666 aa12.42□□□□□ -0.42
PCDHGA11-201ENST00000398587 FTH1P19P0C7X4 201 aa12.42□□□□□ -0.42
PCDHGA11-201ENST00000398587 SLC38A11Q08AI6 406 aa12.42□□□□□ -0.42
PCDHGA11-201ENST00000398587 SSX2Q16385 188 aa12.42□□□□□ -0.42
PCDHGA11-201ENST00000398587 HFEQ30201 348 aa12.42□□□□□ -0.42
PCDHGA11-201ENST00000398587 OSGIN2Q9Y236 505 aa12.42□□□□□ -0.42
PCDHGA11-201ENST00000398587 MTCL1Q9Y4B5 1905 aaKnown RBP12.42□□□□□ -0.42
PCDHGA11-201ENST00000398587 CYTIPO60759 359 aa12.42□□□□□ -0.42
PCDHGA11-201ENST00000398587 SLC25A4P12235 298 aa12.42□□□□□ -0.42
PCDHGA11-201ENST00000398587 ASCL1P50553 236 aa12.42□□□□□ -0.42
PCDHGA11-201ENST00000398587 SKA3Q8IX90 412 aa12.42□□□□□ -0.42
PCDHGA11-201ENST00000398587 ANGPTL6Q8NI99 470 aa12.42□□□□□ -0.42
PCDHGA11-201ENST00000398587 CCL17Q92583 94 aa12.42□□□□□ -0.42
PCDHGA11-201ENST00000398587 ZNF426Q9BUY5 554 aa12.42□□□□□ -0.42
PCDHGA11-201ENST00000398587 B3GALNT1O75752 331 aa12.42□□□□□ -0.42
PCDHGA11-201ENST00000398587 HAND1O96004 215 aa12.42□□□□□ -0.42
PCDHGA11-201ENST00000398587 OR10J4P0C629 311 aa12.42□□□□□ -0.42
PCDHGA11-201ENST00000398587 POLR2GP62487 172 aaKnown RBP eCLIP12.42□□□□□ -0.42
PCDHGA11-201ENST00000398587 ZNF658BQ4V348 819 aaPredicted RBP12.42□□□□□ -0.42
PCDHGA11-201ENST00000398587 LPAR5Q9H1C0 372 aa12.42□□□□□ -0.42
PCDHGA11-201ENST00000398587 MTCH1Q9NZJ7 389 aa12.42□□□□□ -0.42
PCDHGA11-201ENST00000398587 KLK13Q9UKR3 277 aa12.42□□□□□ -0.42
PCDHGA11-201ENST00000398587 KCNK7Q9Y2U2 307 aa12.42□□□□□ -0.42
PCDHGA11-201ENST00000398587 IGHV3-43A0A0B4J1X8 118 aa12.42□□□□□ -0.42
PCDHGA11-201ENST00000398587 TGOLN2O43493 480 aa12.42□□□□□ -0.42
PCDHGA11-201ENST00000398587 IGHV3-43DP0DP04 118 aa12.42□□□□□ -0.42
PCDHGA11-201ENST00000398587 GZMHP20718 246 aa12.42□□□□□ -0.42
PCDHGA11-201ENST00000398587 NPBWR1P48145 328 aa12.42□□□□□ -0.42
PCDHGA11-201ENST00000398587 VAX1Q5SQQ9 334 aa12.42□□□□□ -0.42
PCDHGA11-201ENST00000398587 RPL7L1Q6DKI1 246 aaKnown RBP12.42□□□□□ -0.42
PCDHGA11-201ENST00000398587 LINC00596Q86U02 117 aa12.42□□□□□ -0.42
PCDHGA11-201ENST00000398587 TMEM56Q96MV1 263 aa12.42□□□□□ -0.42
PCDHGA11-201ENST00000398587 DHRS9Q9BPW9 319 aa12.42□□□□□ -0.42
PCDHGA11-201ENST00000398587 RPL36A-HNRNPH2H7BZ11 118 aa12.41□□□□□ -0.42
PCDHGA11-201ENST00000398587 YIF1AO95070 293 aa12.41□□□□□ -0.42
PCDHGA11-201ENST00000398587 IGHMP01871 453 aa12.41□□□□□ -0.42
PCDHGA11-201ENST00000398587 SPINK2P20155 84 aa12.41□□□□□ -0.42
PCDHGA11-201ENST00000398587 TMEM88Q6PEY1 159 aa12.41□□□□□ -0.42
PCDHGA11-201ENST00000398587 SAT2Q96F10 170 aaPredicted RBP12.41□□□□□ -0.42
PCDHGA11-201ENST00000398587 OOEPA6NGQ2 149 aa12.41□□□□□ -0.42
PCDHGA11-201ENST00000398587 ATP6V1G2-DDX39BF2Z307 99 aa12.41□□□□□ -0.42
PCDHGA11-201ENST00000398587 IL24Q13007 206 aa12.41□□□□□ -0.42
PCDHGA11-201ENST00000398587 LGALSLQ3ZCW2 172 aaPredicted RBP12.41□□□□□ -0.42
PCDHGA11-201ENST00000398587 C9orf152Q5JTZ5 239 aa12.41□□□□□ -0.42
PCDHGA11-201ENST00000398587 STUMQ69YW2 141 aa12.41□□□□□ -0.42
PCDHGA11-201ENST00000398587 BAGE3Q86Y29 109 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms