RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 FBXO17Q96EF6 278 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 SCMH1Q96GD3 660 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 CDX2Q99626 313 aaPredicted RBP2.42□□□□□ -2.02
CHD9-202ENST00000398510 KIR2DL4Q99706 377 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 CLEC7AQ9BXN2 247 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 TUBA4BQ9H853 241 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 UTRNP46939 3433 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 A0A1B0GTQ1 180 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 A6NDN8 102 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 FAM90A26D6RGX4 464 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 MT-ND6P03923 174 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 GRPP07492 148 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 TPPP2P59282 170 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 ERVFC1-1P60608 527 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 IFITM2Q01629 132 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 TM4SF20Q53R12 229 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 VWA1Q6PCB0 445 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 MARCH3Q86UD3 253 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 OTOSQ8NHW6 89 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 FBLIM1Q8WUP2 373 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 HGDQ93099 445 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 PTX4Q96A99 478 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 C7orf34Q96L11 122 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 NXF2Q9GZY0 626 aaKnown RBP2.42□□□□□ -2.02
CHD9-202ENST00000398510 MRM2Q9UI43 246 aaKnown RBP2.42□□□□□ -2.02
CHD9-202ENST00000398510 NBASA2RRP1 2371 aa2.42□□□□□ -2.02
CHD9-202ENST00000398510 A0A0A6YYJ9 748 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 A0A1B0GUS0 222 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 SNURFLB1AK76 121 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 HMGN4O00479 90 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 SDHDO14521 159 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 ZNF207O43670 478 aaKnown RBP2.41□□□□□ -2.02
CHD9-202ENST00000398510 GPANK1O95872 356 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 APOBEC3AP31941 199 aaPredicted RBP2.41□□□□□ -2.02
CHD9-202ENST00000398510 SOX3P41225 446 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 METAP1P53582 386 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 RPL31P62899 125 aaKnown RBP2.41□□□□□ -2.02
CHD9-202ENST00000398510 MAT1AQ00266 395 aaKnown RBP2.41□□□□□ -2.02
CHD9-202ENST00000398510 LRRC37A5PQ49AS3 106 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 CYHR1Q6ZMK1 362 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 ZNF66Q6ZN08 573 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 HSD11B1LQ7Z5J1 315 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 MRGPRGQ86SM5 289 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 TNFRSF14Q92956 283 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 OR4C12Q96R67 309 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 INSM2Q96T92 566 aaPredicted RBP2.41□□□□□ -2.02
CHD9-202ENST00000398510 ARHGDIGQ99819 225 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 ATG101Q9BSB4 218 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 INSIG2Q9Y5U4 225 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 SOX21Q9Y651 276 aaPredicted RBP2.41□□□□□ -2.02
CHD9-202ENST00000398510 CLEC18AA5D8T8 446 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 ADAM20O43506 726 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 SYNGR1O43759 233 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 CLDN14O95500 239 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 CXorf1O96002 111 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 ALPLP05186 524 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 ZDHHC11BP0C7U3 371 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 FGF3P11487 239 aaPredicted RBP2.41□□□□□ -2.02
CHD9-202ENST00000398510 HCCSP53701 268 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 FMODQ06828 376 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 SPATC1Q76KD6 591 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 SIRT6Q8N6T7 355 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 CELF2-AS1Q8N7Q2 184 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 CLEC18CQ8NCF0 446 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 OR1J1Q8NGS3 322 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 OR52N5Q8NH56 324 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 LMO3Q8TAP4 145 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 YIPF5Q969M3 257 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 Q96M85 177 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 FAAP24Q9BTP7 215 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 VN1R1Q9GZP7 353 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 RBKSQ9H477 322 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 ZNF385DQ9H6B1 395 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 PRSS50Q9UI38 385 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 SLC22A13Q9Y226 551 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 IQCF6A8MYZ5 107 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 NRG2O14511 850 aaPredicted RBP2.41□□□□□ -2.02
CHD9-202ENST00000398510 FABP7O15540 132 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 SYNGR3O43761 229 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 OR5G3P0C626 314 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 HLA-DRB5Q30154 266 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 FAM166AQ6J272 317 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 TCTN3Q6NUS6 607 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 OR5A2Q8NGI9 324 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 SVIPQ8NHG7 77 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 MARS2Q96GW9 593 aaKnown RBP2.41□□□□□ -2.02
CHD9-202ENST00000398510 NMNAT3Q96T66 252 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 FOXB1Q99853 325 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 GABARAPL3Q9BY60 117 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 C6orf106Q9H6K1 298 aaPredicted RBP2.41□□□□□ -2.02
CHD9-202ENST00000398510 SEPSECSQ9HD40 501 aaKnown RBP2.41□□□□□ -2.02
CHD9-202ENST00000398510 ALPK2Q86TB3 2170 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 FAM90A9PA6NNJ1 464 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 M0R143 59 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 SCGB1D1O95968 90 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 DNAL4O96015 105 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 LIFP15018 202 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 SPI1P17947 270 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 PTPRBP23467 1997 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 HIST1H3AP68431 136 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms