RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 KRT74Q7RTS7 529 aa12.94□□□□□ -0.34
CUX2-202ENST00000397643 ZDHHC23Q8IYP9 409 aa12.94□□□□□ -0.34
CUX2-202ENST00000397643 PIGCQ92535 297 aa12.94□□□□□ -0.34
CUX2-202ENST00000397643 OPALINQ96PE5 141 aa12.94□□□□□ -0.34
CUX2-202ENST00000397643 OCSTAMPQ9BR26 566 aa12.94□□□□□ -0.34
CUX2-202ENST00000397643 MRPS26Q9BYN8 205 aaKnown RBP12.94□□□□□ -0.34
CUX2-202ENST00000397643 DHRS7CA6NNS2 312 aa12.93□□□□□ -0.34
CUX2-202ENST00000397643 INMTO95050 263 aa12.93□□□□□ -0.34
CUX2-202ENST00000397643 CPEP16870 476 aa12.93□□□□□ -0.34
CUX2-202ENST00000397643 DLX6P56179 175 aa12.93□□□□□ -0.34
CUX2-202ENST00000397643 LGALS4P56470 323 aa12.93□□□□□ -0.34
CUX2-202ENST00000397643 EGFEM1PQ0D2K5 195 aa12.93□□□□□ -0.34
CUX2-202ENST00000397643 YIF1BQ5BJH7 314 aa12.93□□□□□ -0.34
CUX2-202ENST00000397643 LIPKQ5VXJ0 399 aa12.93□□□□□ -0.34
CUX2-202ENST00000397643 Q6ZSR3 168 aa12.93□□□□□ -0.34
CUX2-202ENST00000397643 CD177Q8N6Q3 437 aa12.93□□□□□ -0.34
CUX2-202ENST00000397643 OR14K1Q8NGZ2 314 aa12.93□□□□□ -0.34
CUX2-202ENST00000397643 GPR148Q8TDV2 347 aa12.93□□□□□ -0.34
CUX2-202ENST00000397643 B9D2Q9BPU9 175 aa12.93□□□□□ -0.34
CUX2-202ENST00000397643 PLEKHA1Q9HB21 404 aa12.93□□□□□ -0.34
CUX2-202ENST00000397643 V9GYS6 101 aa12.93□□□□□ -0.34
CUX2-202ENST00000397643 H3BSH0 61 aa12.92□□□□□ -0.34
CUX2-202ENST00000397643 SMIM18P0DKX4 95 aa12.92□□□□□ -0.34
CUX2-202ENST00000397643 PF4V1P10720 104 aa12.92□□□□□ -0.34
CUX2-202ENST00000397643 JUNBP17275 347 aaPredicted RBP12.92□□□□□ -0.34
CUX2-202ENST00000397643 VDAC2P45880 294 aaPredicted RBP12.92□□□□□ -0.34
CUX2-202ENST00000397643 CAPZA1P52907 286 aa12.92□□□□□ -0.34
CUX2-202ENST00000397643 DEFB121Q5J5C9 76 aa12.92□□□□□ -0.34
CUX2-202ENST00000397643 SYT6Q5T7P8 510 aaPredicted RBP12.92□□□□□ -0.34
CUX2-202ENST00000397643 ACP7Q6ZNF0 438 aa12.92□□□□□ -0.34
CUX2-202ENST00000397643 MS4A15Q8N5U1 240 aa12.92□□□□□ -0.34
CUX2-202ENST00000397643 OR5AU1Q8NGC0 362 aa12.92□□□□□ -0.34
CUX2-202ENST00000397643 OR4M1Q8NGD0 313 aa12.92□□□□□ -0.34
CUX2-202ENST00000397643 OR13C3Q8NGS6 347 aa12.92□□□□□ -0.34
CUX2-202ENST00000397643 TSEN15Q8WW01 171 aaKnown RBP12.92□□□□□ -0.34
CUX2-202ENST00000397643 AQP3Q92482 292 aa12.92□□□□□ -0.34
CUX2-202ENST00000397643 MUL1Q969V5 352 aa12.92□□□□□ -0.34
CUX2-202ENST00000397643 FOXRED1Q96CU9 486 aaPredicted RBP12.92□□□□□ -0.34
CUX2-202ENST00000397643 C10orf35Q96D05 121 aa12.92□□□□□ -0.34
CUX2-202ENST00000397643 RCC1LQ96I51 464 aaKnown RBP12.92□□□□□ -0.34
CUX2-202ENST00000397643 PGLYRP3Q96LB9 341 aa12.92□□□□□ -0.34
CUX2-202ENST00000397643 ENPP5Q9UJA9 477 aa12.92□□□□□ -0.34
CUX2-202ENST00000397643 PITPNC1Q9UKF7 332 aa12.92□□□□□ -0.34
CUX2-202ENST00000397643 DHDHQ9UQ10 334 aa12.92□□□□□ -0.34
CUX2-202ENST00000397643 PIGLQ9Y2B2 252 aa12.92□□□□□ -0.34
CUX2-202ENST00000397643 TBL2Q9Y4P3 447 aaKnown RBP12.92□□□□□ -0.34
CUX2-202ENST00000397643 STAB2Q8WWQ8 2551 aa12.92□□□□□ -0.34
CUX2-202ENST00000397643 A0A1W2PPH5 198 aa12.91□□□□□ -0.34
CUX2-202ENST00000397643 RFPL4AA6NLU0 287 aa12.91□□□□□ -0.34
CUX2-202ENST00000397643 C17orf98A8MV24 154 aa12.91□□□□□ -0.34
CUX2-202ENST00000397643 ZNF732B4DXR9 585 aa12.91□□□□□ -0.34
CUX2-202ENST00000397643 RFPL4AL1F8VTS6 287 aa12.91□□□□□ -0.34
CUX2-202ENST00000397643 SYNGR1O43759 233 aa12.91□□□□□ -0.34
CUX2-202ENST00000397643 PEX14O75381 377 aa12.91□□□□□ -0.34
CUX2-202ENST00000397643 SERPINA3P01011 423 aa12.91□□□□□ -0.34
CUX2-202ENST00000397643 ZNF20P17024 532 aa12.91□□□□□ -0.34
CUX2-202ENST00000397643 PSMA1P25786 263 aaKnown RBP12.91□□□□□ -0.34
CUX2-202ENST00000397643 CEBPDP49716 269 aaPredicted RBP12.91□□□□□ -0.34
CUX2-202ENST00000397643 DYNLT3P51808 116 aa12.91□□□□□ -0.34
CUX2-202ENST00000397643 GNG3P63215 75 aa12.91□□□□□ -0.34
CUX2-202ENST00000397643 TRAM1Q15629 374 aa12.91□□□□□ -0.34
CUX2-202ENST00000397643 SSX2Q16385 188 aa12.91□□□□□ -0.34
CUX2-202ENST00000397643 DMRTC1Q5HYR2 192 aa12.91□□□□□ -0.34
CUX2-202ENST00000397643 ZNF626Q68DY1 528 aa12.91□□□□□ -0.34
CUX2-202ENST00000397643 OR10AC1Q8NH08 325 aa12.91□□□□□ -0.34
CUX2-202ENST00000397643 THRSPQ92748 146 aa12.91□□□□□ -0.34
CUX2-202ENST00000397643 MALSU1Q96EH3 234 aa12.91□□□□□ -0.34
CUX2-202ENST00000397643 TMED9Q9BVK6 235 aa12.91□□□□□ -0.34
CUX2-202ENST00000397643 ABCB10Q9NRK6 738 aa12.91□□□□□ -0.34
CUX2-202ENST00000397643 CCRL2O00421 344 aa12.9□□□□□ -0.34
CUX2-202ENST00000397643 ARG1P05089 322 aa12.9□□□□□ -0.34
CUX2-202ENST00000397643 CD2P06729 351 aa12.9□□□□□ -0.34
CUX2-202ENST00000397643 OCM2P0CE71 109 aa12.9□□□□□ -0.34
CUX2-202ENST00000397643 HOXD3P31249 432 aaPredicted RBP12.9□□□□□ -0.34
CUX2-202ENST00000397643 CD69Q07108 199 aa12.9□□□□□ -0.34
CUX2-202ENST00000397643 CEP78Q5JTW2 689 aa12.9□□□□□ -0.34
CUX2-202ENST00000397643 CLVS2Q5SYC1 327 aa12.9□□□□□ -0.34
CUX2-202ENST00000397643 ZNF561Q8N587 486 aa12.9□□□□□ -0.34
CUX2-202ENST00000397643 POC1AQ8NBT0 407 aa12.9□□□□□ -0.34
CUX2-202ENST00000397643 OR51A4Q8NGJ6 313 aa12.9□□□□□ -0.34
CUX2-202ENST00000397643 RGP1Q92546 391 aaPredicted RBP12.9□□□□□ -0.34
CUX2-202ENST00000397643 FGGYQ96C11 551 aa12.9□□□□□ -0.34
CUX2-202ENST00000397643 ZNF488Q96MN9 340 aa12.9□□□□□ -0.34
CUX2-202ENST00000397643 HIST1H2AAQ96QV6 131 aa12.9□□□□□ -0.34
CUX2-202ENST00000397643 RASL12Q9NYN1 266 aa12.9□□□□□ -0.34
CUX2-202ENST00000397643 SCOCQ9UIL1 159 aa12.9□□□□□ -0.34
CUX2-202ENST00000397643 DSCAML1Q8TD84 2053 aa12.9□□□□□ -0.34
CUX2-202ENST00000397643 TRBV5-5A0A0J9YX44 114 aa12.89□□□□□ -0.35
CUX2-202ENST00000397643 hCG_1809904A0A1W2PP81 198 aa12.89□□□□□ -0.35
CUX2-202ENST00000397643 A0A1W2PPE2 198 aa12.89□□□□□ -0.35
CUX2-202ENST00000397643 A0A1W2PR64 198 aa12.89□□□□□ -0.35
CUX2-202ENST00000397643 A0A1W2PRV1 198 aa12.89□□□□□ -0.35
CUX2-202ENST00000397643 PF4P02776 101 aa12.89□□□□□ -0.35
CUX2-202ENST00000397643 ALDOBP05062 364 aa12.89□□□□□ -0.35
CUX2-202ENST00000397643 SOX2P48431 317 aa12.89□□□□□ -0.35
CUX2-202ENST00000397643 GP2P55259 537 aaKnown RBP12.89□□□□□ -0.35
CUX2-202ENST00000397643 SMIM21Q3B7S5 101 aa12.89□□□□□ -0.35
CUX2-202ENST00000397643 CEACAM21Q3KPI0 293 aa12.89□□□□□ -0.35
CUX2-202ENST00000397643 Q499Y3 187 aa12.89□□□□□ -0.35
CUX2-202ENST00000397643 HAGHLQ6PII5 290 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms