RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 POM121Q96HA1 1249 aa7.11□□□□□ -1.27
PTPRD-204ENST00000397606 MIXL1Q9H2W2 232 aa7.11□□□□□ -1.27
PTPRD-204ENST00000397606 AMMECR1Q9Y4X0 333 aaPredicted RBP7.11□□□□□ -1.27
PTPRD-204ENST00000397606 SNRPGP15A8MWD9 76 aa7.11□□□□□ -1.27
PTPRD-204ENST00000397606 CNIH1O95406 144 aa7.11□□□□□ -1.27
PTPRD-204ENST00000397606 OR4E1P0C645 316 aa7.11□□□□□ -1.27
PTPRD-204ENST00000397606 CEACAM3P40198 252 aa7.11□□□□□ -1.27
PTPRD-204ENST00000397606 LINC00303Q3SY05 128 aa7.11□□□□□ -1.27
PTPRD-204ENST00000397606 PLA1AQ53H76 456 aa7.11□□□□□ -1.27
PTPRD-204ENST00000397606 ZNF546Q86UE3 836 aa7.11□□□□□ -1.27
PTPRD-204ENST00000397606 SLC35G3Q8N808 338 aa7.11□□□□□ -1.27
PTPRD-204ENST00000397606 NABP1Q96AH0 204 aa7.11□□□□□ -1.27
PTPRD-204ENST00000397606 SUCNR1Q9BXA5 334 aa7.11□□□□□ -1.27
PTPRD-204ENST00000397606 BARX1Q9HBU1 254 aaPredicted RBP7.11□□□□□ -1.27
PTPRD-204ENST00000397606 ZNF224Q9NZL3 707 aa7.11□□□□□ -1.27
PTPRD-204ENST00000397606 A0A0G2JNJ9 132 aa7.11□□□□□ -1.27
PTPRD-204ENST00000397606 K7EPK0 472 aa7.11□□□□□ -1.27
PTPRD-204ENST00000397606 LGALS8O00214 317 aa7.11□□□□□ -1.27
PTPRD-204ENST00000397606 ZG16O60844 167 aa7.11□□□□□ -1.27
PTPRD-204ENST00000397606 CELA3BP08861 270 aa7.11□□□□□ -1.27
PTPRD-204ENST00000397606 GNLYP22749 145 aa7.11□□□□□ -1.27
PTPRD-204ENST00000397606 UBE2MP61081 183 aaKnown RBP7.11□□□□□ -1.27
PTPRD-204ENST00000397606 FCN2Q15485 313 aa7.11□□□□□ -1.27
PTPRD-204ENST00000397606 HIST3H3Q16695 136 aa7.11□□□□□ -1.27
PTPRD-204ENST00000397606 Q6ZNX1 250 aa7.11□□□□□ -1.27
PTPRD-204ENST00000397606 FAM71E2Q8N5Q1 922 aa7.11□□□□□ -1.27
PTPRD-204ENST00000397606 STOML3Q8TAV4 291 aa7.11□□□□□ -1.27
PTPRD-204ENST00000397606 YIPF5Q969M3 257 aa7.11□□□□□ -1.27
PTPRD-204ENST00000397606 RPEQ96AT9 228 aa7.11□□□□□ -1.27
PTPRD-204ENST00000397606 HEYLQ9NQ87 328 aaPredicted RBP7.11□□□□□ -1.27
PTPRD-204ENST00000397606 SLC25A10Q9UBX3 287 aaPredicted RBP7.11□□□□□ -1.27
PTPRD-204ENST00000397606 Q9UFV3 132 aa7.11□□□□□ -1.27
PTPRD-204ENST00000397606 DIDO1Q9BTC0 2240 aaKnown RBP7.11□□□□□ -1.27
PTPRD-204ENST00000397606 IGHV3OR15-7A0A075B7D8 119 aa7.11□□□□□ -1.27
PTPRD-204ENST00000397606 ANKRD20A5PA0PJZ0 165 aa7.11□□□□□ -1.27
PTPRD-204ENST00000397606 J3QRE1 110 aa7.11□□□□□ -1.27
PTPRD-204ENST00000397606 M0R1X1 148 aa7.11□□□□□ -1.27
PTPRD-204ENST00000397606 SYNGR1O43759 233 aa7.11□□□□□ -1.27
PTPRD-204ENST00000397606 NDUFB6O95139 128 aa7.11□□□□□ -1.27
PTPRD-204ENST00000397606 CLDN1O95832 211 aa7.11□□□□□ -1.27
PTPRD-204ENST00000397606 IFNA10P01566 189 aa7.11□□□□□ -1.27
PTPRD-204ENST00000397606 RPA2P15927 270 aa7.11□□□□□ -1.27
PTPRD-204ENST00000397606 EFNB2P52799 333 aa7.11□□□□□ -1.27
PTPRD-204ENST00000397606 RPS16P62249 146 aaKnown RBP7.11□□□□□ -1.27
PTPRD-204ENST00000397606 IL24Q13007 206 aa7.11□□□□□ -1.27
PTPRD-204ENST00000397606 PSG7Q13046 419 aa7.11□□□□□ -1.27
PTPRD-204ENST00000397606 TMEM268Q5VZI3 342 aa7.11□□□□□ -1.27
PTPRD-204ENST00000397606 ZNF826PQ6ZT77 177 aa7.11□□□□□ -1.27
PTPRD-204ENST00000397606 LYG1Q8N1E2 194 aa7.11□□□□□ -1.27
PTPRD-204ENST00000397606 CD300LFQ8TDQ1 290 aa7.11□□□□□ -1.27
PTPRD-204ENST00000397606 TAF9BQ9HBM6 251 aa7.11□□□□□ -1.27
PTPRD-204ENST00000397606 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.1□□□□□ -1.27
PTPRD-204ENST00000397606 TNFSF12O43508 249 aa7.1□□□□□ -1.27
PTPRD-204ENST00000397606 FOXG1P55316 489 aaPredicted RBP7.1□□□□□ -1.27
PTPRD-204ENST00000397606 RAB11AP62491 216 aa7.1□□□□□ -1.27
PTPRD-204ENST00000397606 HBG1P69891 147 aa7.1□□□□□ -1.27
PTPRD-204ENST00000397606 HBG2P69892 147 aa7.1□□□□□ -1.27
PTPRD-204ENST00000397606 SORDQ00796 357 aa7.1□□□□□ -1.27
PTPRD-204ENST00000397606 OR2B11Q5JQS5 317 aa7.1□□□□□ -1.27
PTPRD-204ENST00000397606 GVQW1Q8N7I0 195 aa7.1□□□□□ -1.27
PTPRD-204ENST00000397606 TMEM104Q8NE00 496 aa7.1□□□□□ -1.27
PTPRD-204ENST00000397606 RNF138Q8WVD3 245 aa7.1□□□□□ -1.27
PTPRD-204ENST00000397606 LPAR5Q9H1C0 372 aa7.1□□□□□ -1.27
PTPRD-204ENST00000397606 HEXA-AS1Q9H8Q6 139 aa7.1□□□□□ -1.27
PTPRD-204ENST00000397606 PSG11Q9UQ72 335 aa7.1□□□□□ -1.27
PTPRD-204ENST00000397606 ST8SIA3O43173 380 aa7.1□□□□□ -1.27
PTPRD-204ENST00000397606 DKK1O94907 266 aa7.1□□□□□ -1.27
PTPRD-204ENST00000397606 TRAPPC2P0DI81 140 aa7.1□□□□□ -1.27
PTPRD-204ENST00000397606 TRAPPC2BP0DI82 140 aa7.1□□□□□ -1.27
PTPRD-204ENST00000397606 RPL31P62899 125 aaKnown RBP7.1□□□□□ -1.27
PTPRD-204ENST00000397606 COL10A1Q03692 680 aa7.1□□□□□ -1.27
PTPRD-204ENST00000397606 LYG2Q86SG7 212 aa7.1□□□□□ -1.27
PTPRD-204ENST00000397606 MRPL24Q96A35 216 aaKnown RBP7.1□□□□□ -1.27
PTPRD-204ENST00000397606 FBXO7Q9Y3I1 522 aa7.1□□□□□ -1.27
PTPRD-204ENST00000397606 IGHV1-69-2A0A0G2JMI3 117 aa7.1□□□□□ -1.27
PTPRD-204ENST00000397606 A0A1B0GTI1 187 aa7.1□□□□□ -1.27
PTPRD-204ENST00000397606 IQCF6A8MYZ5 107 aa7.1□□□□□ -1.27
PTPRD-204ENST00000397606 SLC33A1O00400 549 aaPredicted RBP7.1□□□□□ -1.27
PTPRD-204ENST00000397606 TM4SF5O14894 197 aa7.1□□□□□ -1.27
PTPRD-204ENST00000397606 SHOXO15266 292 aa7.1□□□□□ -1.27
PTPRD-204ENST00000397606 ADH4P08319 380 aa7.1□□□□□ -1.27
PTPRD-204ENST00000397606 GNG10P50151 68 aa7.1□□□□□ -1.27
PTPRD-204ENST00000397606 P2RY4P51582 365 aa7.1□□□□□ -1.27
PTPRD-204ENST00000397606 FAM222BQ8WU58 562 aa7.1□□□□□ -1.27
PTPRD-204ENST00000397606 ZDHHC16Q969W1 377 aa7.1□□□□□ -1.27
PTPRD-204ENST00000397606 DHRS9Q9BPW9 319 aa7.1□□□□□ -1.27
PTPRD-204ENST00000397606 RSPO3Q9BXY4 272 aaPredicted RBP7.1□□□□□ -1.27
PTPRD-204ENST00000397606 FLVCR2Q9UPI3 526 aa7.1□□□□□ -1.27
PTPRD-204ENST00000397606 PLXND1Q9Y4D7 1925 aa7.1□□□□□ -1.27
PTPRD-204ENST00000397606 MEX3AA1L020 520 aaKnown RBP7.1□□□□□ -1.27
PTPRD-204ENST00000397606 A1L4Q6 167 aa7.1□□□□□ -1.27
PTPRD-204ENST00000397606 ALX3O95076 343 aa7.1□□□□□ -1.27
PTPRD-204ENST00000397606 MT-CO2P00403 227 aa7.1□□□□□ -1.27
PTPRD-204ENST00000397606 ADRA2CP18825 462 aa7.1□□□□□ -1.27
PTPRD-204ENST00000397606 CRYGSP22914 178 aa7.1□□□□□ -1.27
PTPRD-204ENST00000397606 NKX2-1P43699 371 aaPredicted RBP7.1□□□□□ -1.27
PTPRD-204ENST00000397606 ERVS71-1P61550 626 aa7.1□□□□□ -1.27
PTPRD-204ENST00000397606 HLA-DRB3P79483 266 aa7.1□□□□□ -1.27
PTPRD-204ENST00000397606 SURF2Q15527 256 aaPredicted RBP7.1□□□□□ -1.27
PTPRD-204ENST00000397606 PRR30Q53SZ7 412 aaPredicted RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 140.6 ms