RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 PPIL3Q9H2H8 161 aaKnown RBP20.83■□□□□ 0.93
TSPAN4-207ENST00000397411 SF3B6Q9Y3B4 125 aaKnown RBP20.83■□□□□ 0.93
TSPAN4-207ENST00000397411 MEX3AA1L020 520 aaKnown RBP20.82■□□□□ 0.92
TSPAN4-207ENST00000397411 SLC33A1O00400 549 aaPredicted RBP20.82■□□□□ 0.92
TSPAN4-207ENST00000397411 CCL3L1P16619 93 aa20.82■□□□□ 0.92
TSPAN4-207ENST00000397411 PRTN3P24158 256 aa20.82■□□□□ 0.92
TSPAN4-207ENST00000397411 GP2P55259 537 aaKnown RBP20.82■□□□□ 0.92
TSPAN4-207ENST00000397411 FABP5Q01469 135 aa20.82■□□□□ 0.92
TSPAN4-207ENST00000397411 ZNF273Q14593 569 aa20.82■□□□□ 0.92
TSPAN4-207ENST00000397411 KCTD21Q4G0X4 260 aa20.82■□□□□ 0.92
TSPAN4-207ENST00000397411 UBE2UQ5VVX9 321 aa20.82■□□□□ 0.92
TSPAN4-207ENST00000397411 LRRTM1Q86UE6 522 aa20.82■□□□□ 0.92
TSPAN4-207ENST00000397411 TPRX1Q8N7U7 411 aa20.82■□□□□ 0.92
TSPAN4-207ENST00000397411 OR4D6Q8NGJ1 314 aa20.82■□□□□ 0.92
TSPAN4-207ENST00000397411 SVEP1Q4LDE5 3571 aa20.81■□□□□ 0.92
TSPAN4-207ENST00000397411 A0A1W2PRD5 423 aa20.81■□□□□ 0.92
TSPAN4-207ENST00000397411 A0A1W2PRF3 423 aa20.81■□□□□ 0.92
TSPAN4-207ENST00000397411 A0A1W2PRM7 423 aa20.81■□□□□ 0.92
TSPAN4-207ENST00000397411 RNF212BA8MTL3 300 aa20.81■□□□□ 0.92
TSPAN4-207ENST00000397411 CCRL2O00421 344 aa20.81■□□□□ 0.92
TSPAN4-207ENST00000397411 HSPB6O14558 160 aa20.81■□□□□ 0.92
TSPAN4-207ENST00000397411 OR7C1O76099 320 aaPredicted RBP20.81■□□□□ 0.92
TSPAN4-207ENST00000397411 CALRP27797 417 aaKnown RBP20.81■□□□□ 0.92
TSPAN4-207ENST00000397411 ERP29P30040 261 aaKnown RBP20.81■□□□□ 0.92
TSPAN4-207ENST00000397411 DLX1P56177 255 aa20.81■□□□□ 0.92
TSPAN4-207ENST00000397411 RBM11P57052 281 aaKnown RBP20.81■□□□□ 0.92
TSPAN4-207ENST00000397411 AESQ08117 197 aa20.81■□□□□ 0.92
TSPAN4-207ENST00000397411 SSX1Q16384 188 aa20.81■□□□□ 0.92
TSPAN4-207ENST00000397411 C9orf139Q6ZV77 190 aa20.81■□□□□ 0.92
TSPAN4-207ENST00000397411 HEXA-AS1Q9H8Q6 139 aa20.81■□□□□ 0.92
TSPAN4-207ENST00000397411 SOX21Q9Y651 276 aaPredicted RBP20.81■□□□□ 0.92
TSPAN4-207ENST00000397411 MXRA5Q9NR99 2828 aa20.8■□□□□ 0.92
TSPAN4-207ENST00000397411 CRTAPO75718 401 aaPredicted RBP20.8■□□□□ 0.92
TSPAN4-207ENST00000397411 VENTXO95231 258 aa20.8■□□□□ 0.92
TSPAN4-207ENST00000397411 ZNF728P0DKX0 622 aa20.8■□□□□ 0.92
TSPAN4-207ENST00000397411 P2RX3P56373 397 aa20.8■□□□□ 0.92
TSPAN4-207ENST00000397411 ERVFRD-1P60508 538 aa20.8■□□□□ 0.92
TSPAN4-207ENST00000397411 BAMBIQ13145 260 aa20.8■□□□□ 0.92
TSPAN4-207ENST00000397411 KLRD1Q13241 179 aa20.8■□□□□ 0.92
TSPAN4-207ENST00000397411 KRBOX4Q5JUW0 171 aa20.8■□□□□ 0.92
TSPAN4-207ENST00000397411 ATAD3CQ5T2N8 411 aa20.8■□□□□ 0.92
TSPAN4-207ENST00000397411 LINC00596Q86U02 117 aa20.8■□□□□ 0.92
TSPAN4-207ENST00000397411 MRPS24Q96EL2 167 aaKnown RBP20.8■□□□□ 0.92
TSPAN4-207ENST00000397411 ZNF714Q96N38 554 aa20.8■□□□□ 0.92
TSPAN4-207ENST00000397411 BARHL1Q9BZE3 327 aa20.8■□□□□ 0.92
TSPAN4-207ENST00000397411 NDUFB11Q9NX14 153 aa20.8■□□□□ 0.92
TSPAN4-207ENST00000397411 GHRLQ9UBU3 117 aa20.8■□□□□ 0.92
TSPAN4-207ENST00000397411 FAM96BQ9Y3D0 163 aa20.8■□□□□ 0.92
TSPAN4-207ENST00000397411 A0A1W2PP11 408 aa20.79■□□□□ 0.92
TSPAN4-207ENST00000397411 RNASEK-C17orf49H0YIS7 233 aa20.79■□□□□ 0.92
TSPAN4-207ENST00000397411 GEMIN2O14893 280 aaKnown RBP20.79■□□□□ 0.92
TSPAN4-207ENST00000397411 HILS1P60008 231 aa20.79■□□□□ 0.92
TSPAN4-207ENST00000397411 ATXN7L3Q14CW9 347 aaPredicted RBP20.79■□□□□ 0.92
TSPAN4-207ENST00000397411 METAP1DQ6UB28 335 aaPredicted RBP20.79■□□□□ 0.92
TSPAN4-207ENST00000397411 BANF2Q9H503 90 aa20.79■□□□□ 0.92
TSPAN4-207ENST00000397411 PLGRKTQ9HBL7 147 aa20.79■□□□□ 0.92
TSPAN4-207ENST00000397411 LINC00312Q9Y6C7 94 aa20.79■□□□□ 0.92
TSPAN4-207ENST00000397411 DSCAML1Q8TD84 2053 aa20.78■□□□□ 0.92
TSPAN4-207ENST00000397411 TRGV10A0A0A0MS01 117 aa20.78■□□□□ 0.92
TSPAN4-207ENST00000397411 TRIM77I1YAP6 450 aa20.78■□□□□ 0.92
TSPAN4-207ENST00000397411 UBBP0CG47 229 aa20.78■□□□□ 0.92
TSPAN4-207ENST00000397411 GLIPR1P48060 266 aa20.78■□□□□ 0.92
TSPAN4-207ENST00000397411 UBE2E1P51965 193 aa20.78■□□□□ 0.92
TSPAN4-207ENST00000397411 TAF9Q16594 264 aa20.78■□□□□ 0.92
TSPAN4-207ENST00000397411 MPV17LQ2QL34 196 aa20.78■□□□□ 0.92
TSPAN4-207ENST00000397411 DEFB112Q30KQ8 113 aa20.78■□□□□ 0.92
TSPAN4-207ENST00000397411 NHLRC3Q5JS37 347 aa20.78■□□□□ 0.92
TSPAN4-207ENST00000397411 NEK7Q8TDX7 302 aa20.78■□□□□ 0.92
TSPAN4-207ENST00000397411 SELENOIQ9C0D9 397 aa20.78■□□□□ 0.92
TSPAN4-207ENST00000397411 UNKLQ9H9P5 680 aaKnown RBP20.78■□□□□ 0.92
TSPAN4-207ENST00000397411 AK6Q9Y3D8 172 aaKnown RBP20.78■□□□□ 0.92
TSPAN4-207ENST00000397411 KIAA2026Q5HYC2 2103 aa20.77■□□□□ 0.92
TSPAN4-207ENST00000397411 TRAV24A0A0B4J272 114 aa20.77■□□□□ 0.92
TSPAN4-207ENST00000397411 CSN2P05814 226 aa20.77■□□□□ 0.92
TSPAN4-207ENST00000397411 HTR2CP28335 458 aa20.77■□□□□ 0.92
TSPAN4-207ENST00000397411 NEDD8Q15843 81 aa20.77■□□□□ 0.92
TSPAN4-207ENST00000397411 C1orf100Q5SVJ3 147 aa20.77■□□□□ 0.92
TSPAN4-207ENST00000397411 ZNF782Q6ZMW2 699 aaPredicted RBP20.77■□□□□ 0.92
TSPAN4-207ENST00000397411 LYPD6Q86Y78 171 aa20.77■□□□□ 0.92
TSPAN4-207ENST00000397411 SUMF2Q8NBJ7 301 aa20.77■□□□□ 0.92
TSPAN4-207ENST00000397411 TNFRSF14Q92956 283 aa20.77■□□□□ 0.92
TSPAN4-207ENST00000397411 ZNF48Q96MX3 618 aaPredicted RBP20.77■□□□□ 0.92
TSPAN4-207ENST00000397411 DPCDQ9BVM2 203 aaPredicted RBP20.77■□□□□ 0.92
TSPAN4-207ENST00000397411 CST11Q9H112 138 aa20.77■□□□□ 0.92
TSPAN4-207ENST00000397411 UBE2J1Q9Y385 318 aaPredicted RBP20.77■□□□□ 0.92
TSPAN4-207ENST00000397411 TRDV1A0A1B0GX56 115 aa20.76■□□□□ 0.91
TSPAN4-207ENST00000397411 C17orf98A8MV24 154 aa20.76■□□□□ 0.91
TSPAN4-207ENST00000397411 PDCD5O14737 125 aa20.76■□□□□ 0.91
TSPAN4-207ENST00000397411 NPFFO15130 113 aa20.76■□□□□ 0.91
TSPAN4-207ENST00000397411 TNFAIP8O95379 198 aa20.76■□□□□ 0.91
TSPAN4-207ENST00000397411 MGMTP16455 207 aa20.76■□□□□ 0.91
TSPAN4-207ENST00000397411 COX7A1P24310 79 aa20.76■□□□□ 0.91
TSPAN4-207ENST00000397411 MYL9P24844 172 aa20.76■□□□□ 0.91
TSPAN4-207ENST00000397411 PSMD7P51665 324 aa20.76■□□□□ 0.91
TSPAN4-207ENST00000397411 FAM46BQ96A09 425 aa20.76■□□□□ 0.91
TSPAN4-207ENST00000397411 VCX3AQ9NNX9 186 aa20.76■□□□□ 0.91
TSPAN4-207ENST00000397411 MDFIC2A0A1B0GVS7 189 aa20.75■□□□□ 0.91
TSPAN4-207ENST00000397411 ODAMA1E959 279 aa20.75■□□□□ 0.91
TSPAN4-207ENST00000397411 RANBP1P43487 201 aa20.75■□□□□ 0.91
TSPAN4-207ENST00000397411 KCNJ3P48549 501 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms