RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 LNP1A1A4G5 178 aa9.23□□□□□ -0.93
COL4A4-201ENST00000396625 WNT1P04628 370 aa9.23□□□□□ -0.93
COL4A4-201ENST00000396625 ATF1P18846 271 aa9.23□□□□□ -0.93
COL4A4-201ENST00000396625 NUFIP2Q7Z417 695 aaKnown RBP9.23□□□□□ -0.93
COL4A4-201ENST00000396625 FBXL14Q8N1E6 418 aa9.23□□□□□ -0.93
COL4A4-201ENST00000396625 TEX101Q9BY14 249 aa9.23□□□□□ -0.93
COL4A4-201ENST00000396625 MED29Q9NX70 200 aa9.23□□□□□ -0.93
COL4A4-201ENST00000396625 M0R296 226 aa9.23□□□□□ -0.93
COL4A4-201ENST00000396625 FAM78AQ5JUQ0 283 aa9.23□□□□□ -0.93
COL4A4-201ENST00000396625 ERASQ7Z444 233 aa9.23□□□□□ -0.93
COL4A4-201ENST00000396625 RPS4Y2Q8TD47 263 aa9.23□□□□□ -0.93
COL4A4-201ENST00000396625 RASL11BQ9BPW5 248 aa9.23□□□□□ -0.93
COL4A4-201ENST00000396625 FZR1Q9UM11 496 aa9.23□□□□□ -0.93
COL4A4-201ENST00000396625 CASP8AP2Q9UKL3 1982 aa9.23□□□□□ -0.93
COL4A4-201ENST00000396625 DAOP14920 347 aa9.23□□□□□ -0.93
COL4A4-201ENST00000396625 JOSD1Q15040 202 aaPredicted RBP9.23□□□□□ -0.93
COL4A4-201ENST00000396625 GSG1Q2KHT4 349 aa9.23□□□□□ -0.93
COL4A4-201ENST00000396625 FBXO17Q96EF6 278 aa9.23□□□□□ -0.93
COL4A4-201ENST00000396625 RHOVQ96L33 236 aa9.23□□□□□ -0.93
COL4A4-201ENST00000396625 MRGPRX4Q96LA9 322 aa9.23□□□□□ -0.93
COL4A4-201ENST00000396625 GUCD1Q96NT3 240 aa9.23□□□□□ -0.93
COL4A4-201ENST00000396625 PKIBQ9C010 78 aa9.23□□□□□ -0.93
COL4A4-201ENST00000396625 MYOZ1Q9NP98 299 aaPredicted RBP9.23□□□□□ -0.93
COL4A4-201ENST00000396625 MMP17Q9ULZ9 603 aa9.23□□□□□ -0.93
COL4A4-201ENST00000396625 PPT2Q9UMR5 302 aa9.23□□□□□ -0.93
COL4A4-201ENST00000396625 C19orf53Q9UNZ5 99 aaPredicted RBP9.23□□□□□ -0.93
COL4A4-201ENST00000396625 PKD1L3Q7Z443 1732 aa9.23□□□□□ -0.93
COL4A4-201ENST00000396625 HMSDA8MTL9 139 aa9.23□□□□□ -0.93
COL4A4-201ENST00000396625 MRPL58Q14197 206 aaKnown RBP9.23□□□□□ -0.93
COL4A4-201ENST00000396625 CDX2Q99626 313 aaPredicted RBP9.23□□□□□ -0.93
COL4A4-201ENST00000396625 CD22P20273 847 aa9.22□□□□□ -0.93
COL4A4-201ENST00000396625 CDAP32320 146 aa9.22□□□□□ -0.93
COL4A4-201ENST00000396625 ZNF137PP52743 207 aa9.22□□□□□ -0.93
COL4A4-201ENST00000396625 KLF3P57682 345 aaPredicted RBP9.22□□□□□ -0.93
COL4A4-201ENST00000396625 UBE2V2Q15819 145 aa9.22□□□□□ -0.93
COL4A4-201ENST00000396625 IZUMO4Q1ZYL8 232 aa9.22□□□□□ -0.93
COL4A4-201ENST00000396625 ZNF880Q6PDB4 577 aa9.22□□□□□ -0.93
COL4A4-201ENST00000396625 ADAMTS17Q8TE56 1095 aa9.22□□□□□ -0.93
COL4A4-201ENST00000396625 WFIKKN1Q96NZ8 548 aa9.22□□□□□ -0.93
COL4A4-201ENST00000396625 THADAQ6YHU6 1953 aa9.22□□□□□ -0.93
COL4A4-201ENST00000396625 CXorf1O96002 111 aa9.22□□□□□ -0.93
COL4A4-201ENST00000396625 B3GALT4O96024 378 aa9.22□□□□□ -0.93
COL4A4-201ENST00000396625 BTG2P78543 158 aa9.22□□□□□ -0.93
COL4A4-201ENST00000396625 MPV17LQ2QL34 196 aa9.22□□□□□ -0.93
COL4A4-201ENST00000396625 PARP14Q460N5 1801 aa9.22□□□□□ -0.93
COL4A4-201ENST00000396625 AQP6Q13520 282 aa9.22□□□□□ -0.93
COL4A4-201ENST00000396625 PPIHO43447 177 aaKnown RBP9.22□□□□□ -0.93
COL4A4-201ENST00000396625 FAM3BP58499 235 aaPredicted RBP9.22□□□□□ -0.93
COL4A4-201ENST00000396625 CIRBPQ14011 172 aaKnown RBP9.22□□□□□ -0.93
COL4A4-201ENST00000396625 PARM1Q6UWI2 310 aa9.22□□□□□ -0.93
COL4A4-201ENST00000396625 FOXC2Q99958 501 aa9.22□□□□□ -0.93
COL4A4-201ENST00000396625 FAM74A7A6NL05 159 aa9.22□□□□□ -0.93
COL4A4-201ENST00000396625 SNURFLB1AK76 121 aa9.22□□□□□ -0.93
COL4A4-201ENST00000396625 RPS19BP1Q86WX3 136 aaKnown RBP9.22□□□□□ -0.93
COL4A4-201ENST00000396625 IP6K3Q96PC2 410 aa9.22□□□□□ -0.93
COL4A4-201ENST00000396625 ZMIZ1Q9ULJ6 1067 aa9.22□□□□□ -0.93
COL4A4-201ENST00000396625 TMEM33P57088 247 aa9.22□□□□□ -0.93
COL4A4-201ENST00000396625 SEZ6L2Q6UXD5 910 aa9.22□□□□□ -0.93
COL4A4-201ENST00000396625 OR4S2Q8NH73 311 aa9.22□□□□□ -0.93
COL4A4-201ENST00000396625 CYSLTR2Q9NS75 346 aa9.22□□□□□ -0.93
COL4A4-201ENST00000396625 KLF13Q9Y2Y9 288 aaPredicted RBP9.22□□□□□ -0.93
COL4A4-201ENST00000396625 F11RQ9Y624 299 aaKnown RBP9.22□□□□□ -0.93
COL4A4-201ENST00000396625 HFEQ30201 348 aa9.22□□□□□ -0.93
COL4A4-201ENST00000396625 Q6ZSR9 355 aa9.22□□□□□ -0.93
COL4A4-201ENST00000396625 CHRNA10Q9GZZ6 450 aa9.22□□□□□ -0.93
COL4A4-201ENST00000396625 TCRBV16S1A1N1A0A5B0 115 aa9.21□□□□□ -0.93
COL4A4-201ENST00000396625 HINT1P49773 126 aaPredicted RBP9.21□□□□□ -0.93
COL4A4-201ENST00000396625 PSG5Q15238 335 aa9.21□□□□□ -0.93
COL4A4-201ENST00000396625 C16orf82Q7Z2V1 217 aa9.21□□□□□ -0.93
COL4A4-201ENST00000396625 ETFBKMTQ8IXQ9 262 aa9.21□□□□□ -0.93
COL4A4-201ENST00000396625 LRRC75AQ8NAA5 344 aa9.21□□□□□ -0.93
COL4A4-201ENST00000396625 OR3A4PP47883 348 aa9.21□□□□□ -0.93
COL4A4-201ENST00000396625 IL24Q13007 206 aa9.21□□□□□ -0.93
COL4A4-201ENST00000396625 SPANXN1Q5VSR9 72 aa9.21□□□□□ -0.93
COL4A4-201ENST00000396625 NSUN5P2Q63ZY6 315 aa9.21□□□□□ -0.93
COL4A4-201ENST00000396625 BVESQ8NE79 360 aa9.21□□□□□ -0.93
COL4A4-201ENST00000396625 OR4C3Q8NH37 302 aa9.21□□□□□ -0.93
COL4A4-201ENST00000396625 MBNL1Q9NR56 388 aaKnown RBP9.21□□□□□ -0.93
COL4A4-201ENST00000396625 ERRFI1Q9UJM3 462 aaPredicted RBP9.21□□□□□ -0.93
COL4A4-201ENST00000396625 HERPUD1Q15011 391 aa9.21□□□□□ -0.93
COL4A4-201ENST00000396625 Q5PR19 223 aa9.21□□□□□ -0.93
COL4A4-201ENST00000396625 C10orf113Q5VZT2 155 aa9.21□□□□□ -0.93
COL4A4-201ENST00000396625 NHLRC1Q6VVB1 395 aa9.21□□□□□ -0.93
COL4A4-201ENST00000396625 SLC39A5Q6ZMH5 540 aa9.21□□□□□ -0.93
COL4A4-201ENST00000396625 SSMEM1Q8WWF3 244 aa9.21□□□□□ -0.93
COL4A4-201ENST00000396625 FAM206AQ9NX38 181 aa9.21□□□□□ -0.93
COL4A4-201ENST00000396625 XIRP1Q702N8 1843 aaKnown RBP9.21□□□□□ -0.93
COL4A4-201ENST00000396625 GP1BAP07359 652 aa9.21□□□□□ -0.93
COL4A4-201ENST00000396625 ZNF418Q8TF45 676 aaPredicted RBP9.21□□□□□ -0.93
COL4A4-201ENST00000396625 NPBWR2P48146 333 aa9.21□□□□□ -0.94
COL4A4-201ENST00000396625 DYNLRB2Q8TF09 96 aa9.21□□□□□ -0.94
COL4A4-201ENST00000396625 IDSB3KWA1 339 aa9.21□□□□□ -0.94
COL4A4-201ENST00000396625 RPS27P42677 84 aaKnown RBP9.21□□□□□ -0.94
COL4A4-201ENST00000396625 RAB32Q13637 225 aa9.21□□□□□ -0.94
COL4A4-201ENST00000396625 BEX4Q9NWD9 120 aaPredicted RBP9.21□□□□□ -0.94
COL4A4-201ENST00000396625 K7EQS6 105 aa9.21□□□□□ -0.94
COL4A4-201ENST00000396625 NPPBP16860 134 aa9.21□□□□□ -0.94
COL4A4-201ENST00000396625 HOXA6P31267 233 aa9.21□□□□□ -0.94
COL4A4-201ENST00000396625 SRP14P37108 136 aaKnown RBP9.21□□□□□ -0.94
COL4A4-201ENST00000396625 OTPQ5XKR4 325 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms