RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 SRPXP78539 464 aa13.8□□□□□ -0.2
SNX6-202ENST00000396526 LGI3Q8N145 548 aa13.8□□□□□ -0.2
SNX6-202ENST00000396526 CRIM1Q9NZV1 1036 aa13.8□□□□□ -0.2
SNX6-202ENST00000396526 AMDHD2Q9Y303 409 aa13.8□□□□□ -0.2
SNX6-202ENST00000396526 WDFY3Q8IZQ1 3526 aa13.8□□□□□ -0.2
SNX6-202ENST00000396526 PPYP01298 95 aa13.8□□□□□ -0.2
SNX6-202ENST00000396526 S100A10P60903 97 aa13.8□□□□□ -0.2
SNX6-202ENST00000396526 ZNF718Q3SXZ3 478 aa13.8□□□□□ -0.2
SNX6-202ENST00000396526 SPERTQ8NA61 448 aa13.8□□□□□ -0.2
SNX6-202ENST00000396526 GALNT14Q96FL9 552 aa13.8□□□□□ -0.2
SNX6-202ENST00000396526 IQCF6A8MYZ5 107 aa13.79□□□□□ -0.2
SNX6-202ENST00000396526 TRDCB7Z8K6 153 aa13.79□□□□□ -0.2
SNX6-202ENST00000396526 HSPB6O14558 160 aa13.79□□□□□ -0.2
SNX6-202ENST00000396526 MZT1Q08AG7 82 aa13.79□□□□□ -0.2
SNX6-202ENST00000396526 SPIN3Q5JUX0 258 aa13.79□□□□□ -0.2
SNX6-202ENST00000396526 SUMF2Q8NBJ7 301 aa13.79□□□□□ -0.2
SNX6-202ENST00000396526 RDH5Q92781 318 aa13.79□□□□□ -0.2
SNX6-202ENST00000396526 PHYHIPLQ96FC7 376 aa13.79□□□□□ -0.2
SNX6-202ENST00000396526 SLC2A9Q9NRM0 540 aa13.79□□□□□ -0.2
SNX6-202ENST00000396526 SVILO95425 2214 aa13.79□□□□□ -0.2
SNX6-202ENST00000396526 PIGBOS1A0A0B4J2F0 54 aa13.79□□□□□ -0.2
SNX6-202ENST00000396526 POM121CA8CG34 1229 aa13.79□□□□□ -0.2
SNX6-202ENST00000396526 HS3ST1O14792 307 aa13.79□□□□□ -0.2
SNX6-202ENST00000396526 BET1O15155 118 aa13.79□□□□□ -0.2
SNX6-202ENST00000396526 NXPH2O95156 264 aa13.79□□□□□ -0.2
SNX6-202ENST00000396526 NAPSAO96009 420 aa13.79□□□□□ -0.2
SNX6-202ENST00000396526 IGKV3-15P01624 115 aa13.79□□□□□ -0.2
SNX6-202ENST00000396526 RRASP10301 218 aa13.79□□□□□ -0.2
SNX6-202ENST00000396526 MDH2P40926 338 aaKnown RBP13.79□□□□□ -0.2
SNX6-202ENST00000396526 PHLDA2Q53GA4 152 aa13.79□□□□□ -0.2
SNX6-202ENST00000396526 KRTCAP3Q53RY4 240 aa13.79□□□□□ -0.2
SNX6-202ENST00000396526 BEX5Q5H9J7 111 aa13.79□□□□□ -0.2
SNX6-202ENST00000396526 ZNF610Q8N9Z0 462 aa13.79□□□□□ -0.2
SNX6-202ENST00000396526 SLC25A32Q9H2D1 315 aa13.79□□□□□ -0.2
SNX6-202ENST00000396526 DNAJB11Q9UBS4 358 aa13.79□□□□□ -0.2
SNX6-202ENST00000396526 ATP23Q9Y6H3 246 aa13.79□□□□□ -0.2
SNX6-202ENST00000396526 MBD3L4A6NDZ8 208 aaPredicted RBP13.79□□□□□ -0.2
SNX6-202ENST00000396526 MBD3L3A6NE82 208 aaPredicted RBP13.79□□□□□ -0.2
SNX6-202ENST00000396526 MBD3L5A6NJ08 208 aaPredicted RBP13.79□□□□□ -0.2
SNX6-202ENST00000396526 I3L521 148 aa13.79□□□□□ -0.2
SNX6-202ENST00000396526 AADACP22760 399 aa13.79□□□□□ -0.2
SNX6-202ENST00000396526 TSC22D1Q15714 1073 aa13.79□□□□□ -0.2
SNX6-202ENST00000396526 BHLHA15Q7RTS1 189 aaPredicted RBP13.79□□□□□ -0.2
SNX6-202ENST00000396526 MBD3L2Q8NHZ7 208 aaPredicted RBP13.79□□□□□ -0.2
SNX6-202ENST00000396526 TNRC6AQ8NDV7 1962 aaKnown RBP13.78□□□□□ -0.2
SNX6-202ENST00000396526 ZFHX2Q9C0A1 2572 aaPredicted RBP13.78□□□□□ -0.2
SNX6-202ENST00000396526 TRBV6-7A0A0A0MS04 114 aa13.78□□□□□ -0.2
SNX6-202ENST00000396526 F8VVB4 439 aa13.78□□□□□ -0.2
SNX6-202ENST00000396526 F8VWA3 439 aa13.78□□□□□ -0.2
SNX6-202ENST00000396526 LILRA1O75019 489 aa13.78□□□□□ -0.2
SNX6-202ENST00000396526 CXorf67Q86X51 503 aaPredicted RBP13.78□□□□□ -0.2
SNX6-202ENST00000396526 CMTM1Q8IZ96 169 aa13.78□□□□□ -0.2
SNX6-202ENST00000396526 KLF14Q8TD94 323 aaPredicted RBP13.78□□□□□ -0.2
SNX6-202ENST00000396526 PCNPQ8WW12 178 aaKnown RBP13.78□□□□□ -0.2
SNX6-202ENST00000396526 PRR13Q9NZ81 148 aa13.78□□□□□ -0.2
SNX6-202ENST00000396526 SH2D1BO14796 132 aa13.78□□□□□ -0.2
SNX6-202ENST00000396526 TIMM8AO60220 97 aaPredicted RBP13.78□□□□□ -0.2
SNX6-202ENST00000396526 HOXD4P09016 255 aaPredicted RBP13.78□□□□□ -0.2
SNX6-202ENST00000396526 LUMP51884 338 aaPredicted RBP13.78□□□□□ -0.2
SNX6-202ENST00000396526 PAN3Q58A45 887 aaKnown RBP13.78□□□□□ -0.2
SNX6-202ENST00000396526 FAM180AQ6UWF9 173 aa13.78□□□□□ -0.2
SNX6-202ENST00000396526 PTPRBP23467 1997 aa13.78□□□□□ -0.2
SNX6-202ENST00000396526 RNF222A6NCQ9 220 aa13.77□□□□□ -0.2
SNX6-202ENST00000396526 PSG7Q13046 419 aa13.77□□□□□ -0.2
SNX6-202ENST00000396526 THOC7Q6I9Y2 204 aaKnown RBP13.77□□□□□ -0.2
SNX6-202ENST00000396526 MOB1BQ7L9L4 216 aa13.77□□□□□ -0.2
SNX6-202ENST00000396526 MARS2Q96GW9 593 aaKnown RBP13.77□□□□□ -0.2
SNX6-202ENST00000396526 ZNF488Q96MN9 340 aa13.77□□□□□ -0.2
SNX6-202ENST00000396526 RASL12Q9NYN1 266 aa13.77□□□□□ -0.2
SNX6-202ENST00000396526 SPEF1Q9Y4P9 236 aa13.77□□□□□ -0.2
SNX6-202ENST00000396526 AGFG2O95081 481 aa13.77□□□□□ -0.21
SNX6-202ENST00000396526 GRPP07492 148 aa13.77□□□□□ -0.21
SNX6-202ENST00000396526 TPT1P13693 172 aaKnown RBP13.77□□□□□ -0.21
SNX6-202ENST00000396526 FOXF2Q12947 444 aa13.77□□□□□ -0.21
SNX6-202ENST00000396526 FAM76BQ5HYJ3 339 aa13.77□□□□□ -0.21
SNX6-202ENST00000396526 WDR31Q8NA23 367 aa13.77□□□□□ -0.21
SNX6-202ENST00000396526 SCCPDHQ8NBX0 429 aa13.77□□□□□ -0.21
SNX6-202ENST00000396526 OR10C1Q96KK4 312 aa13.77□□□□□ -0.21
SNX6-202ENST00000396526 OR5H1A6NKK0 313 aa13.77□□□□□ -0.21
SNX6-202ENST00000396526 OR5AC1P0C628 307 aa13.77□□□□□ -0.21
SNX6-202ENST00000396526 GGNBP1Q5YKI7 109 aa13.77□□□□□ -0.21
SNX6-202ENST00000396526 LIAT1Q6ZQX7 453 aa13.77□□□□□ -0.21
SNX6-202ENST00000396526 POC1AQ8NBT0 407 aa13.77□□□□□ -0.21
SNX6-202ENST00000396526 OR8G5Q8NG78 346 aa13.77□□□□□ -0.21
SNX6-202ENST00000396526 STARD4Q96DR4 205 aa13.77□□□□□ -0.21
SNX6-202ENST00000396526 MUCL1Q96DR8 90 aa13.77□□□□□ -0.21
SNX6-202ENST00000396526 ZNF71Q9NQZ8 489 aaPredicted RBP13.77□□□□□ -0.21
SNX6-202ENST00000396526 PURGQ9UJV8 347 aaKnown RBP13.77□□□□□ -0.21
SNX6-202ENST00000396526 PCDHB10Q9UN67 800 aa13.77□□□□□ -0.21
SNX6-202ENST00000396526 UBE2J1Q9Y385 318 aaPredicted RBP13.77□□□□□ -0.21
SNX6-202ENST00000396526 PHF1O43189 567 aaPredicted RBP13.76□□□□□ -0.21
SNX6-202ENST00000396526 RAB32Q13637 225 aa13.76□□□□□ -0.21
SNX6-202ENST00000396526 IGSF11Q5DX21 431 aa13.76□□□□□ -0.21
SNX6-202ENST00000396526 EIF5AL1Q6IS14 154 aaKnown RBP13.76□□□□□ -0.21
SNX6-202ENST00000396526 LRRC20Q8TCA0 184 aa13.76□□□□□ -0.21
SNX6-202ENST00000396526 SECTM1Q8WVN6 248 aa13.76□□□□□ -0.21
SNX6-202ENST00000396526 RSRP1Q9BUV0 290 aa13.76□□□□□ -0.21
SNX6-202ENST00000396526 SLC5A7Q9GZV3 580 aa13.76□□□□□ -0.21
SNX6-202ENST00000396526 OPN3Q9H1Y3 402 aaPredicted RBP13.76□□□□□ -0.21
SNX6-202ENST00000396526 IFT22Q9H7X7 185 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms