RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 SLC35B1P78383 322 aa7.45□□□□□ -1.22
NDE1-202ENST00000396355 PDGFRLQ15198 375 aa7.45□□□□□ -1.22
NDE1-202ENST00000396355 NR0B2Q15466 257 aa7.45□□□□□ -1.22
NDE1-202ENST00000396355 HIST3H3Q16695 136 aa7.45□□□□□ -1.22
NDE1-202ENST00000396355 KIAA1644Q3SXP7 199 aa7.45□□□□□ -1.22
NDE1-202ENST00000396355 BIVMQ86UB2 503 aa7.45□□□□□ -1.22
NDE1-202ENST00000396355 STPG4Q8N801 248 aa7.45□□□□□ -1.22
NDE1-202ENST00000396355 OR10AC1Q8NH08 325 aa7.45□□□□□ -1.22
NDE1-202ENST00000396355 FAM216AQ8WUB2 273 aa7.45□□□□□ -1.22
NDE1-202ENST00000396355 CTDSP1Q9GZU7 261 aa7.45□□□□□ -1.22
NDE1-202ENST00000396355 ABI3Q9P2A4 366 aa7.45□□□□□ -1.22
NDE1-202ENST00000396355 PRSS50Q9UI38 385 aa7.45□□□□□ -1.22
NDE1-202ENST00000396355 VAX2Q9UIW0 290 aa7.45□□□□□ -1.22
NDE1-202ENST00000396355 MRPS18CQ9Y3D5 142 aaKnown RBP7.45□□□□□ -1.22
NDE1-202ENST00000396355 HDGFL3Q9Y3E1 203 aa7.45□□□□□ -1.22
NDE1-202ENST00000396355 TLCD2A6NGC4 264 aa7.44□□□□□ -1.22
NDE1-202ENST00000396355 FGF17O60258 216 aa7.44□□□□□ -1.22
NDE1-202ENST00000396355 UMODP07911 640 aa7.44□□□□□ -1.22
NDE1-202ENST00000396355 GABRR1P24046 479 aa7.44□□□□□ -1.22
NDE1-202ENST00000396355 THBS3P49746 956 aa7.44□□□□□ -1.22
NDE1-202ENST00000396355 RAB38P57729 211 aa7.44□□□□□ -1.22
NDE1-202ENST00000396355 GAGE1Q13065 139 aa7.44□□□□□ -1.22
NDE1-202ENST00000396355 CLEC18BQ6UXF7 455 aa7.44□□□□□ -1.22
NDE1-202ENST00000396355 DPY19L2P2Q6ZN68 376 aa7.44□□□□□ -1.22
NDE1-202ENST00000396355 OR10S1Q8NGN2 331 aa7.44□□□□□ -1.22
NDE1-202ENST00000396355 ARRDC3Q96B67 414 aa7.44□□□□□ -1.22
NDE1-202ENST00000396355 ALG12Q9BV10 488 aa7.44□□□□□ -1.22
NDE1-202ENST00000396355 ABHD6Q9BV23 337 aa7.44□□□□□ -1.22
NDE1-202ENST00000396355 C1orf198Q9H425 327 aa7.44□□□□□ -1.22
NDE1-202ENST00000396355 TAS2R4Q9NYW5 299 aa7.44□□□□□ -1.22
NDE1-202ENST00000396355 SPTAN1Q13813 2472 aaKnown RBP7.44□□□□□ -1.22
NDE1-202ENST00000396355 MDC1Q14676 2089 aaKnown RBP7.44□□□□□ -1.22
NDE1-202ENST00000396355 A0A1B0GU03 582 aa7.44□□□□□ -1.22
NDE1-202ENST00000396355 A0A1W2PP55 124 aa7.44□□□□□ -1.22
NDE1-202ENST00000396355 B4DGG1 531 aa7.44□□□□□ -1.22
NDE1-202ENST00000396355 CDC42EP2O14613 210 aa7.44□□□□□ -1.22
NDE1-202ENST00000396355 CTDSPLO15194 276 aa7.44□□□□□ -1.22
NDE1-202ENST00000396355 ZNF253O75346 499 aa7.44□□□□□ -1.22
NDE1-202ENST00000396355 CTSDP07339 412 aaPredicted RBP7.44□□□□□ -1.22
NDE1-202ENST00000396355 CISD3P0C7P0 127 aa7.44□□□□□ -1.22
NDE1-202ENST00000396355 HIST1H1CP16403 213 aaKnown RBP7.44□□□□□ -1.22
NDE1-202ENST00000396355 MC5RP33032 325 aa7.44□□□□□ -1.22
NDE1-202ENST00000396355 SFTPDP35247 375 aa7.44□□□□□ -1.22
NDE1-202ENST00000396355 PPP1CBP62140 327 aa7.44□□□□□ -1.22
NDE1-202ENST00000396355 RPS4XP62701 263 aaKnown RBP7.44□□□□□ -1.22
NDE1-202ENST00000396355 STUMQ69YW2 141 aa7.44□□□□□ -1.22
NDE1-202ENST00000396355 ZNF788Q6ZQV5 615 aa7.44□□□□□ -1.22
NDE1-202ENST00000396355 BOD1L2Q8IYS8 172 aa7.44□□□□□ -1.22
NDE1-202ENST00000396355 TMEM256Q8N2U0 113 aa7.44□□□□□ -1.22
NDE1-202ENST00000396355 SCNM1Q9BWG6 230 aa7.44□□□□□ -1.22
NDE1-202ENST00000396355 ZNF160Q9HCG1 818 aa7.44□□□□□ -1.22
NDE1-202ENST00000396355 SEPSECSQ9HD40 501 aaKnown RBP7.44□□□□□ -1.22
NDE1-202ENST00000396355 POLR3KQ9Y2Y1 108 aaPredicted RBP7.44□□□□□ -1.22
NDE1-202ENST00000396355 TRPM6Q9BX84 2022 aa7.44□□□□□ -1.22
NDE1-202ENST00000396355 ENSAO43768 121 aaKnown RBP7.44□□□□□ -1.22
NDE1-202ENST00000396355 CDKN2AP42771 156 aaKnown RBP7.44□□□□□ -1.22
NDE1-202ENST00000396355 FAM71F1Q96KD3 344 aaPredicted RBP7.44□□□□□ -1.22
NDE1-202ENST00000396355 NICN1Q9BSH3 213 aa7.44□□□□□ -1.22
NDE1-202ENST00000396355 AICDAQ9GZX7 198 aa7.44□□□□□ -1.22
NDE1-202ENST00000396355 NAT8BQ9UHF3 227 aa7.44□□□□□ -1.22
NDE1-202ENST00000396355 BAHCC1Q9P281 2608 aa7.43□□□□□ -1.22
NDE1-202ENST00000396355 TRAV8-7A0A075B6U6 113 aa7.43□□□□□ -1.22
NDE1-202ENST00000396355 SPAARA0A1B0GVQ0 90 aa7.43□□□□□ -1.22
NDE1-202ENST00000396355 GAGE12BA1L429 117 aa7.43□□□□□ -1.22
NDE1-202ENST00000396355 HMGN4O00479 90 aa7.43□□□□□ -1.22
NDE1-202ENST00000396355 TLX3O43711 291 aaPredicted RBP7.43□□□□□ -1.22
NDE1-202ENST00000396355 NDUFB2O95178 105 aa7.43□□□□□ -1.22
NDE1-202ENST00000396355 EPPINO95925 133 aa7.43□□□□□ -1.22
NDE1-202ENST00000396355 OPN1LWP04000 364 aa7.43□□□□□ -1.22
NDE1-202ENST00000396355 TMEM225BP0DP42 221 aa7.43□□□□□ -1.22
NDE1-202ENST00000396355 SLC6A9P48067 706 aa7.43□□□□□ -1.22
NDE1-202ENST00000396355 PSMB3P49720 205 aa7.43□□□□□ -1.22
NDE1-202ENST00000396355 RPS16P62249 146 aaKnown RBP7.43□□□□□ -1.22
NDE1-202ENST00000396355 TSPO2Q5TGU0 170 aa7.43□□□□□ -1.22
NDE1-202ENST00000396355 CLDN23Q96B33 292 aa7.43□□□□□ -1.22
NDE1-202ENST00000396355 ZC2HC1AQ96GY0 325 aa7.43□□□□□ -1.22
NDE1-202ENST00000396355 LCORQ96JN0 433 aaPredicted RBP7.43□□□□□ -1.22
NDE1-202ENST00000396355 ABHD14AQ9BUJ0 271 aa7.43□□□□□ -1.22
NDE1-202ENST00000396355 HEATR5AQ86XA9 2040 aa7.43□□□□□ -1.22
NDE1-202ENST00000396355 FGF16O43320 207 aa7.43□□□□□ -1.22
NDE1-202ENST00000396355 HLA-GP17693 338 aa7.43□□□□□ -1.22
NDE1-202ENST00000396355 BSGP35613 385 aa7.43□□□□□ -1.22
NDE1-202ENST00000396355 RAB9AP51151 201 aa7.43□□□□□ -1.22
NDE1-202ENST00000396355 BLKP51451 505 aa7.43□□□□□ -1.22
NDE1-202ENST00000396355 SELENOTP62341 195 aa7.43□□□□□ -1.22
NDE1-202ENST00000396355 ZNF542PQ5EBM4 170 aa7.43□□□□□ -1.22
NDE1-202ENST00000396355 LYSMD4Q5XG99 296 aa7.43□□□□□ -1.22
NDE1-202ENST00000396355 NEURL3Q96EH8 262 aa7.43□□□□□ -1.22
NDE1-202ENST00000396355 FAM173AQ9BQD7 235 aa7.43□□□□□ -1.22
NDE1-202ENST00000396355 MANBALQ9NQG1 85 aa7.43□□□□□ -1.22
NDE1-202ENST00000396355 NSG2Q9Y328 171 aa7.43□□□□□ -1.22
NDE1-202ENST00000396355 CDC14BO60729 498 aa7.43□□□□□ -1.22
NDE1-202ENST00000396355 FCGR3AP08637 254 aa7.43□□□□□ -1.22
NDE1-202ENST00000396355 MPZP25189 248 aa7.43□□□□□ -1.22
NDE1-202ENST00000396355 TRA2BP62995 288 aaKnown RBP7.43□□□□□ -1.22
NDE1-202ENST00000396355 AESQ08117 197 aa7.43□□□□□ -1.22
NDE1-202ENST00000396355 IL24Q13007 206 aa7.43□□□□□ -1.22
NDE1-202ENST00000396355 OR1Q1Q15612 314 aa7.43□□□□□ -1.22
NDE1-202ENST00000396355 KCTD18Q6PI47 426 aaPredicted RBP7.43□□□□□ -1.22
NDE1-202ENST00000396355 THSD4Q6ZMP0 1018 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms