RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 SF3B5Q9BWJ5 86 aaKnown RBP11.6□□□□□ -0.55
GTF2F1-201ENST00000394456 SLC7A10Q9NS82 523 aa11.6□□□□□ -0.55
GTF2F1-201ENST00000394456 NDRG3Q9UGV2 375 aa11.6□□□□□ -0.55
GTF2F1-201ENST00000394456 HSF4Q9ULV5 492 aa11.6□□□□□ -0.55
GTF2F1-201ENST00000394456 TIMM10BQ9Y5J6 103 aa11.6□□□□□ -0.55
GTF2F1-201ENST00000394456 RIF1Q5UIP0 2472 aaKnown RBP11.6□□□□□ -0.55
GTF2F1-201ENST00000394456 NKX2-6A6NCS4 301 aa11.59□□□□□ -0.55
GTF2F1-201ENST00000394456 SNAPINO95295 136 aa11.59□□□□□ -0.55
GTF2F1-201ENST00000394456 MMP7P09237 267 aaPredicted RBP11.59□□□□□ -0.55
GTF2F1-201ENST00000394456 OMGP23515 440 aa11.59□□□□□ -0.55
GTF2F1-201ENST00000394456 ASCL4Q6XD76 172 aa11.59□□□□□ -0.55
GTF2F1-201ENST00000394456 LIAT1Q6ZQX7 453 aa11.59□□□□□ -0.55
GTF2F1-201ENST00000394456 LHFPL2Q6ZUX7 228 aa11.59□□□□□ -0.55
GTF2F1-201ENST00000394456 VASH2Q86V25 355 aa11.59□□□□□ -0.55
GTF2F1-201ENST00000394456 MYPOPQ86VE0 399 aaPredicted RBP11.59□□□□□ -0.55
GTF2F1-201ENST00000394456 DMBX1Q8NFW5 382 aa11.59□□□□□ -0.55
GTF2F1-201ENST00000394456 OR56B2PQ8NGI1 322 aa11.59□□□□□ -0.55
GTF2F1-201ENST00000394456 ISOC2Q96AB3 205 aa11.59□□□□□ -0.55
GTF2F1-201ENST00000394456 INTS12Q96CB8 462 aaKnown RBP11.59□□□□□ -0.55
GTF2F1-201ENST00000394456 SAT2Q96F10 170 aaPredicted RBP11.59□□□□□ -0.55
GTF2F1-201ENST00000394456 USB1Q9BQ65 265 aaKnown RBP11.59□□□□□ -0.55
GTF2F1-201ENST00000394456 BCO1Q9HAY6 547 aa11.59□□□□□ -0.55
GTF2F1-201ENST00000394456 DNPH1O43598 174 aa11.59□□□□□ -0.55
GTF2F1-201ENST00000394456 LILRA1O75019 489 aa11.59□□□□□ -0.55
GTF2F1-201ENST00000394456 NGFP01138 241 aa11.59□□□□□ -0.55
GTF2F1-201ENST00000394456 APOC1P02654 83 aa11.59□□□□□ -0.55
GTF2F1-201ENST00000394456 SCTP09683 121 aa11.59□□□□□ -0.55
GTF2F1-201ENST00000394456 MAGEA5P43359 124 aa11.59□□□□□ -0.55
GTF2F1-201ENST00000394456 RBM11P57052 281 aaKnown RBP11.59□□□□□ -0.55
GTF2F1-201ENST00000394456 ABLIM2Q6H8Q1 611 aa11.59□□□□□ -0.55
GTF2F1-201ENST00000394456 SPAG16Q8N0X2 631 aa11.59□□□□□ -0.55
GTF2F1-201ENST00000394456 HPSE2Q8WWQ2 592 aa11.59□□□□□ -0.55
GTF2F1-201ENST00000394456 C10orf35Q96D05 121 aa11.59□□□□□ -0.55
GTF2F1-201ENST00000394456 IP6K3Q96PC2 410 aa11.59□□□□□ -0.55
GTF2F1-201ENST00000394456 FAM173AQ9BQD7 235 aa11.59□□□□□ -0.55
GTF2F1-201ENST00000394456 ZNF703Q9H7S9 590 aaPredicted RBP11.59□□□□□ -0.55
GTF2F1-201ENST00000394456 FAM24AA6NFZ4 105 aa11.59□□□□□ -0.55
GTF2F1-201ENST00000394456 PDCD6O75340 191 aa11.59□□□□□ -0.55
GTF2F1-201ENST00000394456 GPM6AP51674 278 aa11.59□□□□□ -0.55
GTF2F1-201ENST00000394456 ARF1P84077 181 aaKnown RBP11.59□□□□□ -0.55
GTF2F1-201ENST00000394456 CLINT1Q14677 625 aa11.59□□□□□ -0.55
GTF2F1-201ENST00000394456 FBXW12Q6X9E4 464 aa11.59□□□□□ -0.55
GTF2F1-201ENST00000394456 SCRT1Q9BWW7 348 aa11.59□□□□□ -0.55
GTF2F1-201ENST00000394456 CALHM2Q9HA72 323 aa11.59□□□□□ -0.55
GTF2F1-201ENST00000394456 DSPP15924 2871 aaKnown RBP11.58□□□□□ -0.55
GTF2F1-201ENST00000394456 IGKV1D-13A0A0B4J2D9 117 aa11.58□□□□□ -0.56
GTF2F1-201ENST00000394456 TAAR5O14804 337 aa11.58□□□□□ -0.56
GTF2F1-201ENST00000394456 TNFSF12O43508 249 aa11.58□□□□□ -0.56
GTF2F1-201ENST00000394456 IGKV1-13P0DP09 117 aa11.58□□□□□ -0.56
GTF2F1-201ENST00000394456 DTYMKP23919 212 aa11.58□□□□□ -0.56
GTF2F1-201ENST00000394456 PPP1CCP36873 323 aaKnown RBP11.58□□□□□ -0.56
GTF2F1-201ENST00000394456 PPA1Q15181 289 aa11.58□□□□□ -0.56
GTF2F1-201ENST00000394456 ZFP57Q9NU63 452 aa11.58□□□□□ -0.56
GTF2F1-201ENST00000394456 EDARQ9UNE0 448 aa11.58□□□□□ -0.56
GTF2F1-201ENST00000394456 KCNIP3Q9Y2W7 256 aa11.58□□□□□ -0.56
GTF2F1-201ENST00000394456 COLCA2A8K830 154 aa11.58□□□□□ -0.56
GTF2F1-201ENST00000394456 H7C1Q1 480 aa11.58□□□□□ -0.56
GTF2F1-201ENST00000394456 POLR2GP62487 172 aaKnown RBP eCLIP11.58□□□□□ -0.56
GTF2F1-201ENST00000394456 MALLQ13021 153 aa11.58□□□□□ -0.56
GTF2F1-201ENST00000394456 OR8B8Q15620 311 aa11.58□□□□□ -0.56
GTF2F1-201ENST00000394456 FAM76BQ5HYJ3 339 aa11.58□□□□□ -0.56
GTF2F1-201ENST00000394456 MOB3AQ96BX8 217 aa11.58□□□□□ -0.56
GTF2F1-201ENST00000394456 TTTY12Q9BZ98 90 aa11.58□□□□□ -0.56
GTF2F1-201ENST00000394456 ZNF286AQ9HBT8 521 aa11.58□□□□□ -0.56
GTF2F1-201ENST00000394456 PARD6AQ9NPB6 346 aa11.58□□□□□ -0.56
GTF2F1-201ENST00000394456 CACFD1Q9UGQ2 172 aa11.58□□□□□ -0.56
GTF2F1-201ENST00000394456 TRAV39A0A0B4J263 110 aa11.57□□□□□ -0.56
GTF2F1-201ENST00000394456 JTBO76095 146 aa11.57□□□□□ -0.56
GTF2F1-201ENST00000394456 PPYP01298 95 aa11.57□□□□□ -0.56
GTF2F1-201ENST00000394456 GNRHRP30968 328 aa11.57□□□□□ -0.56
GTF2F1-201ENST00000394456 HAAOP46952 286 aa11.57□□□□□ -0.56
GTF2F1-201ENST00000394456 FUT6P51993 359 aa11.57□□□□□ -0.56
GTF2F1-201ENST00000394456 HERPUD1Q15011 391 aa11.57□□□□□ -0.56
GTF2F1-201ENST00000394456 ARL6IP1Q15041 203 aa11.57□□□□□ -0.56
GTF2F1-201ENST00000394456 IZUMO4Q1ZYL8 232 aa11.57□□□□□ -0.56
GTF2F1-201ENST00000394456 CXorf66Q5JRM2 361 aaPredicted RBP11.57□□□□□ -0.56
GTF2F1-201ENST00000394456 TMEM182Q6ZP80 229 aaPredicted RBP11.57□□□□□ -0.56
GTF2F1-201ENST00000394456 TUSC5Q8IXB3 177 aa11.57□□□□□ -0.56
GTF2F1-201ENST00000394456 DEFB124Q8NES8 71 aa11.57□□□□□ -0.56
GTF2F1-201ENST00000394456 EXTL1Q92935 676 aa11.57□□□□□ -0.56
GTF2F1-201ENST00000394456 GALNT14Q96FL9 552 aa11.57□□□□□ -0.56
GTF2F1-201ENST00000394456 PARP11Q9NR21 331 aa11.57□□□□□ -0.56
GTF2F1-201ENST00000394456 ABI3Q9P2A4 366 aa11.57□□□□□ -0.56
GTF2F1-201ENST00000394456 SLC7A11Q9UPY5 501 aa11.57□□□□□ -0.56
GTF2F1-201ENST00000394456 STARD10Q9Y365 291 aa11.57□□□□□ -0.56
GTF2F1-201ENST00000394456 FBXO7Q9Y3I1 522 aa11.57□□□□□ -0.56
GTF2F1-201ENST00000394456 IGHV3-64DA0A0J9YX35 117 aa11.57□□□□□ -0.56
GTF2F1-201ENST00000394456 SPAARA0A1B0GVQ0 90 aa11.57□□□□□ -0.56
GTF2F1-201ENST00000394456 C5orf49A4QMS7 147 aa11.57□□□□□ -0.56
GTF2F1-201ENST00000394456 GALR2O43603 387 aaPredicted RBP11.57□□□□□ -0.56
GTF2F1-201ENST00000394456 RAB13P51153 203 aa11.57□□□□□ -0.56
GTF2F1-201ENST00000394456 PLGLB1Q02325 96 aa11.57□□□□□ -0.56
GTF2F1-201ENST00000394456 SWI5Q1ZZU3 235 aa11.57□□□□□ -0.56
GTF2F1-201ENST00000394456 SPIN3Q5JUX0 258 aa11.57□□□□□ -0.56
GTF2F1-201ENST00000394456 CPNE4Q96A23 557 aaPredicted RBP11.57□□□□□ -0.56
GTF2F1-201ENST00000394456 C14orf79Q96F83 325 aa11.57□□□□□ -0.56
GTF2F1-201ENST00000394456 PARPBPQ9NWS1 579 aa11.57□□□□□ -0.56
GTF2F1-201ENST00000394456 ZNF292O60281 2723 aa11.57□□□□□ -0.56
GTF2F1-201ENST00000394456 ZNF816-ZNF321PA0A0X1KG74 233 aa11.56□□□□□ -0.56
GTF2F1-201ENST00000394456 E5RGE8 158 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms