RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 ACACAQ13085 2346 aa12.83□□□□□ -0.36
GPC3-202ENST00000394299 OR5B21A6NL26 309 aa12.83□□□□□ -0.36
GPC3-202ENST00000394299 NAPSAO96009 420 aa12.83□□□□□ -0.36
GPC3-202ENST00000394299 CGAP01215 116 aa12.83□□□□□ -0.36
GPC3-202ENST00000394299 NMBP08949 121 aa12.83□□□□□ -0.36
GPC3-202ENST00000394299 OR5AC1P0C628 307 aa12.83□□□□□ -0.36
GPC3-202ENST00000394299 ZNF250P15622 560 aa12.83□□□□□ -0.36
GPC3-202ENST00000394299 COX5AP20674 150 aa12.83□□□□□ -0.36
GPC3-202ENST00000394299 MRPL49Q13405 166 aaKnown RBP12.83□□□□□ -0.36
GPC3-202ENST00000394299 IGFL3Q6UXB1 125 aa12.83□□□□□ -0.36
GPC3-202ENST00000394299 Q6ZS92 163 aa12.83□□□□□ -0.36
GPC3-202ENST00000394299 SLC51BQ86UW2 128 aa12.83□□□□□ -0.36
GPC3-202ENST00000394299 RTN4IP1Q8WWV3 396 aaPredicted RBP12.83□□□□□ -0.36
GPC3-202ENST00000394299 A0A0B4J2A0 478 aa12.82□□□□□ -0.36
GPC3-202ENST00000394299 IGKV1-6A0A0C4DH72 117 aa12.82□□□□□ -0.36
GPC3-202ENST00000394299 A0A0D9SG52 128 aa12.82□□□□□ -0.36
GPC3-202ENST00000394299 B3GALNT1O75752 331 aa12.82□□□□□ -0.36
GPC3-202ENST00000394299 IGKV3-15P01624 115 aa12.82□□□□□ -0.36
GPC3-202ENST00000394299 CECR9P0C854 216 aa12.82□□□□□ -0.36
GPC3-202ENST00000394299 CBR1P16152 277 aa12.82□□□□□ -0.36
GPC3-202ENST00000394299 RCC1P18754 421 aaPredicted RBP12.82□□□□□ -0.36
GPC3-202ENST00000394299 FABP6P51161 128 aa12.82□□□□□ -0.36
GPC3-202ENST00000394299 IL24Q13007 206 aa12.82□□□□□ -0.36
GPC3-202ENST00000394299 ZNF154Q13106 437 aa12.82□□□□□ -0.36
GPC3-202ENST00000394299 ABCA11PQ4W5N1 156 aa12.82□□□□□ -0.36
GPC3-202ENST00000394299 SCARB1Q8WTV0 552 aa12.82□□□□□ -0.36
GPC3-202ENST00000394299 ST8SIA2Q92186 375 aa12.82□□□□□ -0.36
GPC3-202ENST00000394299 ZNF471Q9BX82 626 aaPredicted RBP12.82□□□□□ -0.36
GPC3-202ENST00000394299 COL25A1Q9BXS0 654 aaPredicted RBP12.82□□□□□ -0.36
GPC3-202ENST00000394299 ZNF71Q9NQZ8 489 aaPredicted RBP12.82□□□□□ -0.36
GPC3-202ENST00000394299 SLC2A9Q9NRM0 540 aa12.82□□□□□ -0.36
GPC3-202ENST00000394299 SHPKQ9UHJ6 478 aa12.82□□□□□ -0.36
GPC3-202ENST00000394299 AUP1Q9Y679 476 aa12.82□□□□□ -0.36
GPC3-202ENST00000394299 CADP27708 2225 aa12.82□□□□□ -0.36
GPC3-202ENST00000394299 FAM90A10PA6NDY2 464 aa12.81□□□□□ -0.36
GPC3-202ENST00000394299 FAM90A18PA6NE21 464 aa12.81□□□□□ -0.36
GPC3-202ENST00000394299 FAM90A16PA6NEW6 464 aa12.81□□□□□ -0.36
GPC3-202ENST00000394299 FAM90A20PA6NIJ5 464 aa12.81□□□□□ -0.36
GPC3-202ENST00000394299 FAM90A8PA6NJQ4 464 aa12.81□□□□□ -0.36
GPC3-202ENST00000394299 FAM90A7PA6NKC0 464 aa12.81□□□□□ -0.36
GPC3-202ENST00000394299 FAM90A22PA8MWA6 464 aa12.81□□□□□ -0.36
GPC3-202ENST00000394299 FAM90A12PA8MX19 464 aa12.81□□□□□ -0.36
GPC3-202ENST00000394299 FAM90A5PA8MXJ8 464 aa12.81□□□□□ -0.36
GPC3-202ENST00000394299 FAM90A23PA8MXZ1 464 aa12.81□□□□□ -0.36
GPC3-202ENST00000394299 OR2F2O95006 317 aa12.81□□□□□ -0.36
GPC3-202ENST00000394299 FAM90A15PP0C7V4 464 aa12.81□□□□□ -0.36
GPC3-202ENST00000394299 FAM90A13PP0C7W8 464 aa12.81□□□□□ -0.36
GPC3-202ENST00000394299 FAM90A14PP0C7W9 464 aa12.81□□□□□ -0.36
GPC3-202ENST00000394299 FAM90A24PP0C7X0 464 aa12.81□□□□□ -0.36
GPC3-202ENST00000394299 OR2F1Q13607 317 aa12.81□□□□□ -0.36
GPC3-202ENST00000394299 ZNF826PQ6ZT77 177 aa12.81□□□□□ -0.36
GPC3-202ENST00000394299 POC1AQ8NBT0 407 aa12.81□□□□□ -0.36
GPC3-202ENST00000394299 SNIP1Q8TAD8 396 aaKnown RBP12.81□□□□□ -0.36
GPC3-202ENST00000394299 UBALD1Q8TB05 177 aa12.81□□□□□ -0.36
GPC3-202ENST00000394299 C2orf50Q96LR7 162 aa12.81□□□□□ -0.36
GPC3-202ENST00000394299 ADAT1Q9BUB4 502 aaKnown RBP12.81□□□□□ -0.36
GPC3-202ENST00000394299 PROCRQ9UNN8 238 aa12.81□□□□□ -0.36
GPC3-202ENST00000394299 FAM215AQ9Y5M1 114 aa12.81□□□□□ -0.36
GPC3-202ENST00000394299 KANTRA0A1W2PQU2 76 aa12.81□□□□□ -0.36
GPC3-202ENST00000394299 PPYP01298 95 aa12.81□□□□□ -0.36
GPC3-202ENST00000394299 TFF1P04155 84 aa12.81□□□□□ -0.36
GPC3-202ENST00000394299 ZNF44P15621 663 aa12.81□□□□□ -0.36
GPC3-202ENST00000394299 HOXC12P31275 282 aa12.81□□□□□ -0.36
GPC3-202ENST00000394299 S100A10P60903 97 aa12.81□□□□□ -0.36
GPC3-202ENST00000394299 IL15RAQ13261 267 aa12.81□□□□□ -0.36
GPC3-202ENST00000394299 MPV17LQ2QL34 196 aa12.81□□□□□ -0.36
GPC3-202ENST00000394299 INO80EQ8NBZ0 244 aaPredicted RBP12.81□□□□□ -0.36
GPC3-202ENST00000394299 MOB3AQ96BX8 217 aa12.81□□□□□ -0.36
GPC3-202ENST00000394299 LOC105371267A0A1B0GV96 52 aa12.8□□□□□ -0.36
GPC3-202ENST00000394299 J3QT63 122 aa12.8□□□□□ -0.36
GPC3-202ENST00000394299 SIRPB1O00241 398 aa12.8□□□□□ -0.36
GPC3-202ENST00000394299 SNAPC5O75971 98 aa12.8□□□□□ -0.36
GPC3-202ENST00000394299 RRASP10301 218 aa12.8□□□□□ -0.36
GPC3-202ENST00000394299 CEBPDP49716 269 aaPredicted RBP12.8□□□□□ -0.36
GPC3-202ENST00000394299 FOXC1Q12948 553 aa12.8□□□□□ -0.36
GPC3-202ENST00000394299 TMEM187Q14656 261 aa12.8□□□□□ -0.36
GPC3-202ENST00000394299 IAH1Q2TAA2 248 aaPredicted RBP12.8□□□□□ -0.36
GPC3-202ENST00000394299 FAM76BQ5HYJ3 339 aa12.8□□□□□ -0.36
GPC3-202ENST00000394299 GGNBP1Q5YKI7 109 aa12.8□□□□□ -0.36
GPC3-202ENST00000394299 LYZL2Q7Z4W2 148 aa12.8□□□□□ -0.36
GPC3-202ENST00000394299 CCDC36Q8IYA8 594 aa12.8□□□□□ -0.36
GPC3-202ENST00000394299 MRPL30Q8TCC3 161 aaKnown RBP12.8□□□□□ -0.36
GPC3-202ENST00000394299 RTL8AQ9BWD3 113 aa12.8□□□□□ -0.36
GPC3-202ENST00000394299 NAA60Q9H7X0 242 aa12.8□□□□□ -0.36
GPC3-202ENST00000394299 C1orf123Q9NWV4 160 aa12.8□□□□□ -0.36
GPC3-202ENST00000394299 HEATR1Q9H583 2144 aaKnown RBP12.8□□□□□ -0.36
GPC3-202ENST00000394299 IGKV1D-13A0A0B4J2D9 117 aa12.8□□□□□ -0.36
GPC3-202ENST00000394299 F5H0A9 414 aaPredicted RBP12.8□□□□□ -0.36
GPC3-202ENST00000394299 I3L521 148 aa12.8□□□□□ -0.36
GPC3-202ENST00000394299 MLNRO43193 412 aa12.8□□□□□ -0.36
GPC3-202ENST00000394299 BCL2L11O43521 198 aa12.8□□□□□ -0.36
GPC3-202ENST00000394299 IGKV1-13P0DP09 117 aa12.8□□□□□ -0.36
GPC3-202ENST00000394299 RAC2P15153 192 aa12.8□□□□□ -0.36
GPC3-202ENST00000394299 PMELP40967 661 aa12.8□□□□□ -0.36
GPC3-202ENST00000394299 ECI1P42126 302 aa12.8□□□□□ -0.36
GPC3-202ENST00000394299 GLP1RP43220 463 aa12.8□□□□□ -0.36
GPC3-202ENST00000394299 CYCSP99999 105 aaKnown RBP12.8□□□□□ -0.36
GPC3-202ENST00000394299 ZNF345Q14585 488 aa12.8□□□□□ -0.36
GPC3-202ENST00000394299 TOR2AQ5JU69 321 aa12.8□□□□□ -0.36
GPC3-202ENST00000394299 OR2A2Q6IF42 318 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms