RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 OR5P3Q8WZ94 311 aa9.52□□□□□ -0.89
TCOF1-203ENST00000394269 MRPS24Q96EL2 167 aaKnown RBP9.52□□□□□ -0.89
TCOF1-203ENST00000394269 FAHD2AQ96GK7 314 aa9.52□□□□□ -0.89
TCOF1-203ENST00000394269 MYOZ1Q9NP98 299 aaPredicted RBP9.52□□□□□ -0.89
TCOF1-203ENST00000394269 CLCF1Q9UBD9 225 aa9.52□□□□□ -0.89
TCOF1-203ENST00000394269 HSF4Q9ULV5 492 aa9.52□□□□□ -0.89
TCOF1-203ENST00000394269 PHF1O43189 567 aaPredicted RBP9.52□□□□□ -0.89
TCOF1-203ENST00000394269 NXPH3O95157 252 aa9.52□□□□□ -0.89
TCOF1-203ENST00000394269 DIRAS3O95661 229 aa9.52□□□□□ -0.89
TCOF1-203ENST00000394269 COX5BP10606 129 aa9.52□□□□□ -0.89
TCOF1-203ENST00000394269 CEBPDP49716 269 aaPredicted RBP9.52□□□□□ -0.89
TCOF1-203ENST00000394269 UCP2P55851 309 aa9.52□□□□□ -0.89
TCOF1-203ENST00000394269 ESCO2Q56NI9 601 aa9.52□□□□□ -0.89
TCOF1-203ENST00000394269 NSUN5P2Q63ZY6 315 aa9.52□□□□□ -0.89
TCOF1-203ENST00000394269 ELP2Q6IA86 826 aa9.52□□□□□ -0.89
TCOF1-203ENST00000394269 Q6ZT83 130 aa9.52□□□□□ -0.89
TCOF1-203ENST00000394269 ZNF573Q86YE8 665 aa9.52□□□□□ -0.89
TCOF1-203ENST00000394269 FAM58AQ8N1B3 248 aa9.52□□□□□ -0.89
TCOF1-203ENST00000394269 TMEM185AQ8NFB2 350 aa9.52□□□□□ -0.89
TCOF1-203ENST00000394269 SMIM3Q9BZL3 60 aa9.52□□□□□ -0.89
TCOF1-203ENST00000394269 OR5AC2Q9NZP5 309 aa9.52□□□□□ -0.89
TCOF1-203ENST00000394269 EDARQ9UNE0 448 aa9.52□□□□□ -0.89
TCOF1-203ENST00000394269 LGALS8O00214 317 aa9.52□□□□□ -0.89
TCOF1-203ENST00000394269 HSD17B6O14756 317 aa9.52□□□□□ -0.89
TCOF1-203ENST00000394269 DEGS1O15121 323 aa9.52□□□□□ -0.89
TCOF1-203ENST00000394269 NXPH2O95156 264 aa9.52□□□□□ -0.89
TCOF1-203ENST00000394269 CRYZL1O95825 349 aa9.52□□□□□ -0.89
TCOF1-203ENST00000394269 MPZP25189 248 aa9.52□□□□□ -0.89
TCOF1-203ENST00000394269 MPV17P39210 176 aa9.52□□□□□ -0.89
TCOF1-203ENST00000394269 GABRA6Q16445 453 aa9.52□□□□□ -0.89
TCOF1-203ENST00000394269 ZNF660Q6AZW8 331 aaPredicted RBP9.52□□□□□ -0.89
TCOF1-203ENST00000394269 MRPL24Q96A35 216 aaKnown RBP9.52□□□□□ -0.89
TCOF1-203ENST00000394269 TECTBQ96PL2 329 aa9.52□□□□□ -0.89
TCOF1-203ENST00000394269 ZSCAN5BA6NJL1 495 aa9.51□□□□□ -0.89
TCOF1-203ENST00000394269 SLC34A2O95436 690 aa9.51□□□□□ -0.89
TCOF1-203ENST00000394269 NUP62P37198 522 aaPredicted RBP9.51□□□□□ -0.89
TCOF1-203ENST00000394269 FGF12P61328 243 aa9.51□□□□□ -0.89
TCOF1-203ENST00000394269 PSG7Q13046 419 aa9.51□□□□□ -0.89
TCOF1-203ENST00000394269 TOR2AQ5JU69 321 aa9.51□□□□□ -0.89
TCOF1-203ENST00000394269 Q6ZPA2 131 aa9.51□□□□□ -0.89
TCOF1-203ENST00000394269 ACOT7LQ6ZUV0 252 aa9.51□□□□□ -0.89
TCOF1-203ENST00000394269 SUMF2Q8NBJ7 301 aa9.51□□□□□ -0.89
TCOF1-203ENST00000394269 FAM122AQ96E09 287 aa9.51□□□□□ -0.89
TCOF1-203ENST00000394269 ADAT1Q9BUB4 502 aaKnown RBP9.51□□□□□ -0.89
TCOF1-203ENST00000394269 ESRP2Q9H6T0 727 aaKnown RBP9.51□□□□□ -0.89
TCOF1-203ENST00000394269 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.51□□□□□ -0.89
TCOF1-203ENST00000394269 LHX6Q9UPM6 363 aa9.51□□□□□ -0.89
TCOF1-203ENST00000394269 LOC105371267A0A1B0GV96 52 aa9.51□□□□□ -0.89
TCOF1-203ENST00000394269 RPS10-NUDT3A0A1W2PQS6 291 aa9.51□□□□□ -0.89
TCOF1-203ENST00000394269 H0YIZ8 118 aa9.51□□□□□ -0.89
TCOF1-203ENST00000394269 HSPA12AO43301 675 aa9.51□□□□□ -0.89
TCOF1-203ENST00000394269 SMPD2O60906 423 aa9.51□□□□□ -0.89
TCOF1-203ENST00000394269 SS18L1O75177 396 aaPredicted RBP9.51□□□□□ -0.89
TCOF1-203ENST00000394269 CST4P01036 141 aa9.51□□□□□ -0.89
TCOF1-203ENST00000394269 IFNA21P01568 189 aa9.51□□□□□ -0.89
TCOF1-203ENST00000394269 IGHG3P01860 377 aa9.51□□□□□ -0.89
TCOF1-203ENST00000394269 TK1P04183 234 aa9.51□□□□□ -0.89
TCOF1-203ENST00000394269 RPA2P15927 270 aa9.51□□□□□ -0.89
TCOF1-203ENST00000394269 ZNF83P51522 516 aa9.51□□□□□ -0.89
TCOF1-203ENST00000394269 OR8G1Q15617 311 aa9.51□□□□□ -0.89
TCOF1-203ENST00000394269 PLEKHN1Q494U1 663 aaPredicted RBP9.51□□□□□ -0.89
TCOF1-203ENST00000394269 ASCL4Q6XD76 172 aa9.51□□□□□ -0.89
TCOF1-203ENST00000394269 LYZL2Q7Z4W2 148 aa9.51□□□□□ -0.89
TCOF1-203ENST00000394269 SLC51BQ86UW2 128 aa9.51□□□□□ -0.89
TCOF1-203ENST00000394269 ZNF565Q8N9K5 539 aa9.51□□□□□ -0.89
TCOF1-203ENST00000394269 ST8SIA2Q92186 375 aa9.51□□□□□ -0.89
TCOF1-203ENST00000394269 SLC2A9Q9NRM0 540 aa9.51□□□□□ -0.89
TCOF1-203ENST00000394269 ATPIF1Q9UII2 106 aa9.51□□□□□ -0.89
TCOF1-203ENST00000394269 ANAPC10Q9UM13 185 aa9.51□□□□□ -0.89
TCOF1-203ENST00000394269 TNFSF18Q9UNG2 199 aa9.51□□□□□ -0.89
TCOF1-203ENST00000394269 PROCRQ9UNN8 238 aa9.51□□□□□ -0.89
TCOF1-203ENST00000394269 TIMM8AO60220 97 aaPredicted RBP9.5□□□□□ -0.89
TCOF1-203ENST00000394269 CD8AP01732 235 aa9.5□□□□□ -0.89
TCOF1-203ENST00000394269 ZNF14P17017 642 aaPredicted RBP9.5□□□□□ -0.89
TCOF1-203ENST00000394269 PPA1Q15181 289 aa9.5□□□□□ -0.89
TCOF1-203ENST00000394269 ACSF3Q4G176 576 aaPredicted RBP9.5□□□□□ -0.89
TCOF1-203ENST00000394269 C20orf204Q6ZNR8 217 aa9.5□□□□□ -0.89
TCOF1-203ENST00000394269 KLF14Q8TD94 323 aaPredicted RBP9.5□□□□□ -0.89
TCOF1-203ENST00000394269 C1orf123Q9NWV4 160 aa9.5□□□□□ -0.89
TCOF1-203ENST00000394269 A0A0D9SG52 128 aa9.5□□□□□ -0.89
TCOF1-203ENST00000394269 RNF222A6NCQ9 220 aa9.5□□□□□ -0.89
TCOF1-203ENST00000394269 MSGN1A6NI15 193 aa9.5□□□□□ -0.89
TCOF1-203ENST00000394269 BMP5P22003 454 aa9.5□□□□□ -0.89
TCOF1-203ENST00000394269 DTYMKP23919 212 aa9.5□□□□□ -0.89
TCOF1-203ENST00000394269 DHODHQ02127 395 aa9.5□□□□□ -0.89
TCOF1-203ENST00000394269 PAN3Q58A45 887 aaKnown RBP9.5□□□□□ -0.89
TCOF1-203ENST00000394269 NHLRC3Q5JS37 347 aa9.5□□□□□ -0.89
TCOF1-203ENST00000394269 CLLU1Q5K131 121 aa9.5□□□□□ -0.89
TCOF1-203ENST00000394269 OR6K3Q8NGY3 331 aa9.5□□□□□ -0.89
TCOF1-203ENST00000394269 RRNAD1Q96FB5 475 aaKnown RBP9.5□□□□□ -0.89
TCOF1-203ENST00000394269 DMRTA2Q96SC8 542 aa9.5□□□□□ -0.89
TCOF1-203ENST00000394269 MPC1Q9Y5U8 109 aa9.5□□□□□ -0.89
TCOF1-203ENST00000394269 ZNF462Q96JM2 2506 aa9.5□□□□□ -0.89
TCOF1-203ENST00000394269 AQP7O14520 342 aa9.5□□□□□ -0.89
TCOF1-203ENST00000394269 CYCSP99999 105 aaKnown RBP9.5□□□□□ -0.89
TCOF1-203ENST00000394269 RBM39Q14498 530 aaKnown RBP9.5□□□□□ -0.89
TCOF1-203ENST00000394269 GGNBP1Q5YKI7 109 aa9.5□□□□□ -0.89
TCOF1-203ENST00000394269 SCCPDHQ8NBX0 429 aa9.5□□□□□ -0.89
TCOF1-203ENST00000394269 NARS2Q96I59 477 aaKnown RBP9.5□□□□□ -0.89
TCOF1-203ENST00000394269 RTL8AQ9BWD3 113 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms