RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 SLC25A19Q9HC21 320 aa12□□□□□ -0.49
USP49-203ENST00000394253 WRAP73Q9P2S5 460 aaPredicted RBP12□□□□□ -0.49
USP49-203ENST00000394253 NDUFB3O43676 98 aa12□□□□□ -0.49
USP49-203ENST00000394253 MAS1LP35410 378 aa12□□□□□ -0.49
USP49-203ENST00000394253 SPACA5Q96QH8 159 aa12□□□□□ -0.49
USP49-203ENST00000394253 SLCO1C1Q9NYB5 712 aa12□□□□□ -0.49
USP49-203ENST00000394253 TRAV8-7A0A075B6U6 113 aa12□□□□□ -0.49
USP49-203ENST00000394253 F11P03951 625 aa12□□□□□ -0.49
USP49-203ENST00000394253 CSNK1DP48730 415 aa12□□□□□ -0.49
USP49-203ENST00000394253 SPRED3Q2MJR0 410 aa12□□□□□ -0.49
USP49-203ENST00000394253 RND1Q92730 232 aa12□□□□□ -0.49
USP49-203ENST00000394253 GNG7O60262 68 aa12□□□□□ -0.49
USP49-203ENST00000394253 IGHV4-34P06331 123 aa12□□□□□ -0.49
USP49-203ENST00000394253 HKR1P10072 659 aa12□□□□□ -0.49
USP49-203ENST00000394253 GNG3P63215 75 aa12□□□□□ -0.49
USP49-203ENST00000394253 PSG5Q15238 335 aa12□□□□□ -0.49
USP49-203ENST00000394253 SGMS2Q8NHU3 365 aa12□□□□□ -0.49
USP49-203ENST00000394253 TOE1Q96GM8 510 aaKnown RBP12□□□□□ -0.49
USP49-203ENST00000394253 TIMP4Q99727 224 aa12□□□□□ -0.49
USP49-203ENST00000394253 ALKBH7Q9BT30 221 aaPredicted RBP12□□□□□ -0.49
USP49-203ENST00000394253 TRBV9A0A0B4J1U6 114 aa12□□□□□ -0.49
USP49-203ENST00000394253 CA1P00915 261 aaPredicted RBP12□□□□□ -0.49
USP49-203ENST00000394253 PMELP40967 661 aa12□□□□□ -0.49
USP49-203ENST00000394253 MAP1LC3AQ9H492 121 aa12□□□□□ -0.49
USP49-203ENST00000394253 CA10Q9NS85 328 aa12□□□□□ -0.49
USP49-203ENST00000394253 HDGFL3Q9Y3E1 203 aa12□□□□□ -0.49
USP49-203ENST00000394253 C10orf113Q5VZT2 155 aa11.99□□□□□ -0.49
USP49-203ENST00000394253 TCF23Q7RTU1 214 aa11.99□□□□□ -0.49
USP49-203ENST00000394253 MFAP2P55001 183 aa11.99□□□□□ -0.49
USP49-203ENST00000394253 PPP1R1AQ13522 171 aa11.99□□□□□ -0.49
USP49-203ENST00000394253 MPV17LQ2QL34 196 aa11.99□□□□□ -0.49
USP49-203ENST00000394253 ANKRD37Q7Z713 158 aa11.99□□□□□ -0.49
USP49-203ENST00000394253 ZNF441Q8N8Z8 693 aa11.99□□□□□ -0.49
USP49-203ENST00000394253 YIPF6Q96EC8 236 aa11.99□□□□□ -0.49
USP49-203ENST00000394253 C5P01031 1676 aa11.99□□□□□ -0.49
USP49-203ENST00000394253 FAM157CP0CG43 387 aa11.99□□□□□ -0.49
USP49-203ENST00000394253 MUC20Q8N307 709 aaPredicted RBP11.99□□□□□ -0.49
USP49-203ENST00000394253 C2orf88Q9BSF0 95 aa11.99□□□□□ -0.49
USP49-203ENST00000394253 WIPI2Q9Y4P8 454 aa11.99□□□□□ -0.49
USP49-203ENST00000394253 SPCS1Q9Y6A9 102 aa11.99□□□□□ -0.49
USP49-203ENST00000394253 TAF1P21675 1872 aa11.99□□□□□ -0.49
USP49-203ENST00000394253 B4GALT3O60512 393 aa11.99□□□□□ -0.49
USP49-203ENST00000394253 ZNF273Q14593 569 aa11.99□□□□□ -0.49
USP49-203ENST00000394253 ZNF880Q6PDB4 577 aa11.99□□□□□ -0.49
USP49-203ENST00000394253 KIDINS220Q9ULH0 1771 aa11.99□□□□□ -0.49
USP49-203ENST00000394253 MFAP4P55083 255 aa11.99□□□□□ -0.49
USP49-203ENST00000394253 TMEM25Q86YD3 366 aa11.99□□□□□ -0.49
USP49-203ENST00000394253 CBLN2Q8IUK8 224 aa11.99□□□□□ -0.49
USP49-203ENST00000394253 OR2K2Q8NGT1 345 aa11.99□□□□□ -0.49
USP49-203ENST00000394253 MGST2Q99735 147 aa11.99□□□□□ -0.49
USP49-203ENST00000394253 DMRT1Q9Y5R6 373 aa11.99□□□□□ -0.49
USP49-203ENST00000394253 SRSF5Q13243 272 aaKnown RBP11.99□□□□□ -0.49
USP49-203ENST00000394253 ST3GAL2Q16842 350 aa11.99□□□□□ -0.49
USP49-203ENST00000394253 C7orf77A4D0Y5 90 aa11.99□□□□□ -0.49
USP49-203ENST00000394253 K7EQS6 105 aa11.99□□□□□ -0.49
USP49-203ENST00000394253 TAPBPO15533 448 aa11.99□□□□□ -0.49
USP49-203ENST00000394253 SLC25A20O43772 301 aa11.99□□□□□ -0.49
USP49-203ENST00000394253 WNT5BQ9H1J7 359 aa11.99□□□□□ -0.49
USP49-203ENST00000394253 FOXJ2Q9P0K8 574 aa11.99□□□□□ -0.49
USP49-203ENST00000394253 IL19Q9UHD0 177 aa11.99□□□□□ -0.49
USP49-203ENST00000394253 NBASA2RRP1 2371 aa11.98□□□□□ -0.49
USP49-203ENST00000394253 CA13Q8N1Q1 262 aa11.98□□□□□ -0.49
USP49-203ENST00000394253 FOXC2Q99958 501 aa11.98□□□□□ -0.49
USP49-203ENST00000394253 EMC6Q9BV81 110 aa11.98□□□□□ -0.49
USP49-203ENST00000394253 KBTBD11O94819 623 aa11.98□□□□□ -0.49
USP49-203ENST00000394253 CLDN2P57739 230 aa11.98□□□□□ -0.49
USP49-203ENST00000394253 RPL18Q07020 188 aaKnown RBP11.98□□□□□ -0.49
USP49-203ENST00000394253 SIX1Q15475 284 aaPredicted RBP11.98□□□□□ -0.49
USP49-203ENST00000394253 TMEM95Q3KNT9 176 aa11.98□□□□□ -0.49
USP49-203ENST00000394253 GLCCI1Q86VQ1 547 aa11.98□□□□□ -0.49
USP49-203ENST00000394253 ABHD3Q8WU67 409 aa11.98□□□□□ -0.49
USP49-203ENST00000394253 ALG14Q96F25 216 aa11.98□□□□□ -0.49
USP49-203ENST00000394253 OR5AC2Q9NZP5 309 aa11.98□□□□□ -0.49
USP49-203ENST00000394253 PSMB5P28074 263 aa11.98□□□□□ -0.49
USP49-203ENST00000394253 TNFSF10P50591 281 aa11.98□□□□□ -0.49
USP49-203ENST00000394253 MYBPHQ13203 477 aa11.98□□□□□ -0.49
USP49-203ENST00000394253 PSMG4Q5JS54 123 aa11.98□□□□□ -0.49
USP49-203ENST00000394253 DERL1Q9BUN8 251 aa11.98□□□□□ -0.49
USP49-203ENST00000394253 IGHV3-9P01782 118 aa11.98□□□□□ -0.49
USP49-203ENST00000394253 FAM157BP0CG42 384 aa11.98□□□□□ -0.49
USP49-203ENST00000394253 EPHA8P29322 1005 aaPredicted RBP11.98□□□□□ -0.49
USP49-203ENST00000394253 RAC3P60763 192 aa11.98□□□□□ -0.49
USP49-203ENST00000394253 HFEQ30201 348 aa11.98□□□□□ -0.49
USP49-203ENST00000394253 TCF24Q7RTU0 167 aa11.98□□□□□ -0.49
USP49-203ENST00000394253 C16orf82Q7Z2V1 217 aa11.98□□□□□ -0.49
USP49-203ENST00000394253 HSD11B1LQ7Z5J1 315 aa11.98□□□□□ -0.49
USP49-203ENST00000394253 LYG1Q8N1E2 194 aa11.98□□□□□ -0.49
USP49-203ENST00000394253 LAT2Q9GZY6 243 aa11.98□□□□□ -0.49
USP49-203ENST00000394253 CD74P04233 296 aa11.98□□□□□ -0.49
USP49-203ENST00000394253 CKS1BP61024 79 aa11.98□□□□□ -0.49
USP49-203ENST00000394253 CLEC18BQ6UXF7 455 aa11.98□□□□□ -0.49
USP49-203ENST00000394253 MRGPRX4Q96LA9 322 aa11.98□□□□□ -0.49
USP49-203ENST00000394253 GNG10P50151 68 aa11.98□□□□□ -0.49
USP49-203ENST00000394253 SERF2P84101 59 aa11.98□□□□□ -0.49
USP49-203ENST00000394253 ZNF345Q14585 488 aa11.98□□□□□ -0.49
USP49-203ENST00000394253 ZNF683Q8IZ20 524 aa11.98□□□□□ -0.49
USP49-203ENST00000394253 DYNLRB2Q8TF09 96 aa11.98□□□□□ -0.49
USP49-203ENST00000394253 MMP17Q9ULZ9 603 aa11.98□□□□□ -0.49
USP49-203ENST00000394253 ADAMTSL4Q6UY14 1074 aa11.98□□□□□ -0.49
USP49-203ENST00000394253 LINC01387J3KSC0 135 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms