RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 C10orf35Q96D05 121 aa12.12□□□□□ -0.47
CHMP3-202ENST00000393773 ADAT3Q96EY9 351 aaPredicted RBP12.12□□□□□ -0.47
CHMP3-202ENST00000393773 RAX2Q96IS3 184 aa12.12□□□□□ -0.47
CHMP3-202ENST00000393773 KIRREL1Q96J84 757 aa12.12□□□□□ -0.47
CHMP3-202ENST00000393773 DUX3Q96PT4 197 aa12.12□□□□□ -0.47
CHMP3-202ENST00000393773 TBX5Q99593 518 aa12.12□□□□□ -0.47
CHMP3-202ENST00000393773 PRRG3Q9BZD7 231 aa12.12□□□□□ -0.47
CHMP3-202ENST00000393773 ZFP57Q9NU63 452 aa12.12□□□□□ -0.47
CHMP3-202ENST00000393773 C3orf84H3BNL1 204 aa12.11□□□□□ -0.47
CHMP3-202ENST00000393773 TOR1AO14656 332 aa12.11□□□□□ -0.47
CHMP3-202ENST00000393773 FAM106CPP0CH98 169 aa12.11□□□□□ -0.47
CHMP3-202ENST00000393773 EPHA2P29317 976 aa12.11□□□□□ -0.47
CHMP3-202ENST00000393773 KIR3DL2P43630 455 aa12.11□□□□□ -0.47
CHMP3-202ENST00000393773 DAPP51397 102 aa12.11□□□□□ -0.47
CHMP3-202ENST00000393773 ATP1B3P54709 279 aa12.11□□□□□ -0.47
CHMP3-202ENST00000393773 ISL1P61371 349 aa12.11□□□□□ -0.47
CHMP3-202ENST00000393773 CBX1P83916 185 aa12.11□□□□□ -0.47
CHMP3-202ENST00000393773 C12orf73Q69YU5 71 aa12.11□□□□□ -0.47
CHMP3-202ENST00000393773 UNQ9370/PRO34162Q6UXP9 181 aa12.11□□□□□ -0.47
CHMP3-202ENST00000393773 THNSL2Q86YJ6 484 aa12.11□□□□□ -0.47
CHMP3-202ENST00000393773 GID4Q8IVV7 300 aa12.11□□□□□ -0.47
CHMP3-202ENST00000393773 OR4D6Q8NGJ1 314 aa12.11□□□□□ -0.47
CHMP3-202ENST00000393773 NSL1Q96IY1 281 aa12.11□□□□□ -0.47
CHMP3-202ENST00000393773 PRR25Q96S07 402 aa12.11□□□□□ -0.47
CHMP3-202ENST00000393773 PPIL3Q9H2H8 161 aaKnown RBP12.11□□□□□ -0.47
CHMP3-202ENST00000393773 ZMAT5Q9UDW3 170 aaKnown RBP12.11□□□□□ -0.47
CHMP3-202ENST00000393773 GLS2Q9UI32 602 aa12.11□□□□□ -0.47
CHMP3-202ENST00000393773 LINC00527Q9UJ94 153 aa12.11□□□□□ -0.47
CHMP3-202ENST00000393773 GSTK1Q9Y2Q3 226 aa12.11□□□□□ -0.47
CHMP3-202ENST00000393773 A0A1W2PQL4 384 aaPredicted RBP12.1□□□□□ -0.47
CHMP3-202ENST00000393773 FUOMA2VDF0 154 aa12.1□□□□□ -0.47
CHMP3-202ENST00000393773 ZNF729A6NN14 1252 aaPredicted RBP12.1□□□□□ -0.47
CHMP3-202ENST00000393773 SH2D1BO14796 132 aa12.1□□□□□ -0.47
CHMP3-202ENST00000393773 FGF16O43320 207 aa12.1□□□□□ -0.47
CHMP3-202ENST00000393773 RAMP3O60896 148 aa12.1□□□□□ -0.47
CHMP3-202ENST00000393773 FKBP6O75344 327 aa12.1□□□□□ -0.47
CHMP3-202ENST00000393773 KDM4BO94953 1096 aa12.1□□□□□ -0.47
CHMP3-202ENST00000393773 CYB5AP00167 134 aa12.1□□□□□ -0.47
CHMP3-202ENST00000393773 SERPINA3P01011 423 aa12.1□□□□□ -0.47
CHMP3-202ENST00000393773 UBCP0CG48 685 aaKnown RBP12.1□□□□□ -0.47
CHMP3-202ENST00000393773 T-ENOLP0DO92 83 aa12.1□□□□□ -0.47
CHMP3-202ENST00000393773 HOXB6P17509 224 aaKnown RBP12.1□□□□□ -0.47
CHMP3-202ENST00000393773 PRRX1P54821 245 aa12.1□□□□□ -0.47
CHMP3-202ENST00000393773 MTCP1P56278 107 aa12.1□□□□□ -0.47
CHMP3-202ENST00000393773 PDZK1IP1Q13113 114 aa12.1□□□□□ -0.47
CHMP3-202ENST00000393773 ATXN7L3Q14CW9 347 aaPredicted RBP12.1□□□□□ -0.47
CHMP3-202ENST00000393773 Q6P435 159 aa12.1□□□□□ -0.47
CHMP3-202ENST00000393773 ZNF695Q8IW36 515 aa12.1□□□□□ -0.47
CHMP3-202ENST00000393773 COMMD1Q8N668 190 aa12.1□□□□□ -0.47
CHMP3-202ENST00000393773 DRAM1Q8N682 238 aa12.1□□□□□ -0.47
CHMP3-202ENST00000393773 OR9G1Q8NH87 305 aa12.1□□□□□ -0.47
CHMP3-202ENST00000393773 RFT1Q96AA3 541 aa12.1□□□□□ -0.47
CHMP3-202ENST00000393773 RPEQ96AT9 228 aa12.1□□□□□ -0.47
CHMP3-202ENST00000393773 PCDHB16Q9NRJ7 776 aa12.1□□□□□ -0.47
CHMP3-202ENST00000393773 METTL15A6NJ78 407 aa12.09□□□□□ -0.47
CHMP3-202ENST00000393773 ZAR1LA6NP61 321 aa12.09□□□□□ -0.47
CHMP3-202ENST00000393773 SERPINE3A8MV23 424 aa12.09□□□□□ -0.47
CHMP3-202ENST00000393773 SLC33A1O00400 549 aaPredicted RBP12.09□□□□□ -0.47
CHMP3-202ENST00000393773 SULT1C4O75897 302 aa12.09□□□□□ -0.47
CHMP3-202ENST00000393773 APOL3O95236 402 aa12.09□□□□□ -0.47
CHMP3-202ENST00000393773 IGHG2P01859 326 aa12.09□□□□□ -0.47
CHMP3-202ENST00000393773 CGB3P0DN86 165 aa12.09□□□□□ -0.47
CHMP3-202ENST00000393773 CGB7P0DN87 165 aa12.09□□□□□ -0.47
CHMP3-202ENST00000393773 TMEM11P17152 192 aa12.09□□□□□ -0.47
CHMP3-202ENST00000393773 ATF1P18846 271 aa12.09□□□□□ -0.47
CHMP3-202ENST00000393773 CALB2P22676 271 aa12.09□□□□□ -0.47
CHMP3-202ENST00000393773 SLC35B1P78383 322 aa12.09□□□□□ -0.47
CHMP3-202ENST00000393773 DIAPH2-AS1Q14236 149 aa12.09□□□□□ -0.47
CHMP3-202ENST00000393773 KPNB1Q14974 876 aaKnown RBP12.09□□□□□ -0.47
CHMP3-202ENST00000393773 KRBOX4Q5JUW0 171 aa12.09□□□□□ -0.47
CHMP3-202ENST00000393773 LHFPL2Q6ZUX7 228 aa12.09□□□□□ -0.47
CHMP3-202ENST00000393773 UTS2BQ765I0 119 aa12.09□□□□□ -0.47
CHMP3-202ENST00000393773 RDH10Q8IZV5 341 aa12.09□□□□□ -0.47
CHMP3-202ENST00000393773 STPG2Q8N412 459 aa12.09□□□□□ -0.47
CHMP3-202ENST00000393773 SPSB1Q96BD6 273 aa12.09□□□□□ -0.47
CHMP3-202ENST00000393773 NRBF2Q96F24 287 aa12.09□□□□□ -0.47
CHMP3-202ENST00000393773 OPALINQ96PE5 141 aa12.09□□□□□ -0.47
CHMP3-202ENST00000393773 IL4I1Q96RQ9 567 aa12.09□□□□□ -0.47
CHMP3-202ENST00000393773 AMMECR1Q9Y4X0 333 aaPredicted RBP12.09□□□□□ -0.47
CHMP3-202ENST00000393773 MITFO75030 526 aaPredicted RBP12.08□□□□□ -0.48
CHMP3-202ENST00000393773 ZFPL1O95159 310 aa12.08□□□□□ -0.48
CHMP3-202ENST00000393773 OR2T7P0C7T2 308 aa12.08□□□□□ -0.48
CHMP3-202ENST00000393773 ZNF44P15621 663 aa12.08□□□□□ -0.48
CHMP3-202ENST00000393773 PRKACBP22694 351 aa12.08□□□□□ -0.48
CHMP3-202ENST00000393773 NFYBP25208 207 aa12.08□□□□□ -0.48
CHMP3-202ENST00000393773 GP2P55259 537 aaKnown RBP12.08□□□□□ -0.48
CHMP3-202ENST00000393773 RAB25P57735 213 aa12.08□□□□□ -0.48
CHMP3-202ENST00000393773 GNGT1P63211 74 aa12.08□□□□□ -0.48
CHMP3-202ENST00000393773 DEFB136Q30KP8 78 aa12.08□□□□□ -0.48
CHMP3-202ENST00000393773 SLC35E3Q7Z769 313 aa12.08□□□□□ -0.48
CHMP3-202ENST00000393773 CHST4Q8NCG5 386 aa12.08□□□□□ -0.48
CHMP3-202ENST00000393773 LEAP2Q969E1 77 aa12.08□□□□□ -0.48
CHMP3-202ENST00000393773 ADI1Q9BV57 179 aa12.08□□□□□ -0.48
CHMP3-202ENST00000393773 ING3Q9NXR8 418 aa12.08□□□□□ -0.48
CHMP3-202ENST00000393773 H2AFY2Q9P0M6 372 aaPredicted RBP12.08□□□□□ -0.48
CHMP3-202ENST00000393773 WARS2Q9UGM6 360 aaKnown RBP12.08□□□□□ -0.48
CHMP3-202ENST00000393773 KBTBD11-OT1A0A1B0GTJ5 212 aa12.07□□□□□ -0.48
CHMP3-202ENST00000393773 TCRBV3S1A0A5B6 114 aa12.07□□□□□ -0.48
CHMP3-202ENST00000393773 LINC01548A6NM66 108 aa12.07□□□□□ -0.48
CHMP3-202ENST00000393773 J3QR06 171 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms