RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 PRRC2AP48634 2157 aaKnown RBP11.43□□□□□ -0.58
PTN-202ENST00000393083 VPS13CQ709C8 3753 aa11.43□□□□□ -0.58
PTN-202ENST00000393083 ARID1AO14497 2285 aa11.42□□□□□ -0.58
PTN-202ENST00000393083 CREBBPQ92793 2442 aa11.42□□□□□ -0.58
PTN-202ENST00000393083 TRAV6A0A075B6T7 132 aa11.42□□□□□ -0.58
PTN-202ENST00000393083 hCG_1807616A0A1W2PRN6 198 aa11.42□□□□□ -0.58
PTN-202ENST00000393083 C3orf80F5H4A9 247 aa11.42□□□□□ -0.58
PTN-202ENST00000393083 M0QYG6 137 aa11.42□□□□□ -0.58
PTN-202ENST00000393083 NXPH2O95156 264 aa11.42□□□□□ -0.58
PTN-202ENST00000393083 CD74P04233 296 aa11.42□□□□□ -0.58
PTN-202ENST00000393083 FUT3P21217 361 aa11.42□□□□□ -0.58
PTN-202ENST00000393083 ZNF81P51508 661 aa11.42□□□□□ -0.58
PTN-202ENST00000393083 GMFBP60983 142 aa11.42□□□□□ -0.58
PTN-202ENST00000393083 ERVK11-1P61568 191 aa11.42□□□□□ -0.58
PTN-202ENST00000393083 MPPED2Q15777 294 aa11.42□□□□□ -0.58
PTN-202ENST00000393083 BRICD5Q6PL45 260 aa11.42□□□□□ -0.58
PTN-202ENST00000393083 C11orf53Q8IXP5 236 aa11.42□□□□□ -0.58
PTN-202ENST00000393083 CADM3Q8N126 398 aa11.42□□□□□ -0.58
PTN-202ENST00000393083 OR56B4Q8NH76 319 aa11.42□□□□□ -0.58
PTN-202ENST00000393083 DYRK2Q92630 601 aa11.42□□□□□ -0.58
PTN-202ENST00000393083 SNAPC3Q92966 411 aa11.42□□□□□ -0.58
PTN-202ENST00000393083 CMSS1Q9BQ75 279 aaKnown RBP11.42□□□□□ -0.58
PTN-202ENST00000393083 OCSTAMPQ9BR26 566 aa11.42□□□□□ -0.58
PTN-202ENST00000393083 HDHD3Q9BSH5 251 aaPredicted RBP11.42□□□□□ -0.58
PTN-202ENST00000393083 MARVELD1Q9BSK0 173 aa11.42□□□□□ -0.58
PTN-202ENST00000393083 TINAGL1Q9GZM7 467 aaPredicted RBP11.42□□□□□ -0.58
PTN-202ENST00000393083 NUDT15Q9NV35 164 aa11.42□□□□□ -0.58
PTN-202ENST00000393083 UBE2QL1A1L167 161 aa11.41□□□□□ -0.58
PTN-202ENST00000393083 INMT-MINDY4F8WBC2 141 aa11.41□□□□□ -0.58
PTN-202ENST00000393083 PFDN1O60925 122 aa11.41□□□□□ -0.58
PTN-202ENST00000393083 IGHV4-39P01824 125 aa11.41□□□□□ -0.58
PTN-202ENST00000393083 NAT1P18440 290 aa11.41□□□□□ -0.58
PTN-202ENST00000393083 AMY2BP19961 511 aa11.41□□□□□ -0.58
PTN-202ENST00000393083 DUSP1P28562 367 aa11.41□□□□□ -0.58
PTN-202ENST00000393083 PPOXP50336 477 aa11.41□□□□□ -0.58
PTN-202ENST00000393083 ATP5J2P56134 94 aa11.41□□□□□ -0.58
PTN-202ENST00000393083 MEF2DQ14814 521 aa11.41□□□□□ -0.58
PTN-202ENST00000393083 RNASE10Q5GAN6 216 aaKnown RBP11.41□□□□□ -0.58
PTN-202ENST00000393083 FIP1L1Q6UN15 594 aaKnown RBP11.41□□□□□ -0.58
PTN-202ENST00000393083 WDR82Q6UXN9 313 aa11.41□□□□□ -0.58
PTN-202ENST00000393083 BTN2A1Q7KYR7 527 aa11.41□□□□□ -0.58
PTN-202ENST00000393083 MEGF10Q96KG7 1140 aa11.41□□□□□ -0.58
PTN-202ENST00000393083 OR2V2Q96R30 315 aa11.41□□□□□ -0.58
PTN-202ENST00000393083 C20orf85Q9H1P6 137 aa11.41□□□□□ -0.58
PTN-202ENST00000393083 C1orf123Q9NWV4 160 aa11.41□□□□□ -0.58
PTN-202ENST00000393083 RCC2Q9P258 522 aaKnown RBP11.41□□□□□ -0.58
PTN-202ENST00000393083 FBXO9Q9UK97 447 aaPredicted RBP11.41□□□□□ -0.58
PTN-202ENST00000393083 TANC2Q9HCD6 1990 aa11.41□□□□□ -0.58
PTN-202ENST00000393083 A0A0B4J293 547 aa11.41□□□□□ -0.58
PTN-202ENST00000393083 H3BUI4 141 aa11.41□□□□□ -0.58
PTN-202ENST00000393083 NOS1APO75052 506 aaPredicted RBP11.41□□□□□ -0.58
PTN-202ENST00000393083 PTBP3O95758 552 aaKnown RBP11.41□□□□□ -0.58
PTN-202ENST00000393083 AMY2AP04746 511 aa11.41□□□□□ -0.58
PTN-202ENST00000393083 CSN2P05814 226 aa11.41□□□□□ -0.58
PTN-202ENST00000393083 ACAA1P09110 424 aaPredicted RBP11.41□□□□□ -0.58
PTN-202ENST00000393083 TBPP20226 339 aa11.41□□□□□ -0.58
PTN-202ENST00000393083 TNFSF4P23510 183 aa11.41□□□□□ -0.58
PTN-202ENST00000393083 HRH1P35367 487 aa11.41□□□□□ -0.58
PTN-202ENST00000393083 RAB25P57735 213 aa11.41□□□□□ -0.58
PTN-202ENST00000393083 ACTBL2Q562R1 376 aa11.41□□□□□ -0.58
PTN-202ENST00000393083 PRSS57Q6UWY2 283 aa11.41□□□□□ -0.58
PTN-202ENST00000393083 HOGA1Q86XE5 327 aa11.41□□□□□ -0.58
PTN-202ENST00000393083 ZCCHC24Q8N2G6 241 aaKnown RBP11.41□□□□□ -0.58
PTN-202ENST00000393083 BPIFB2Q8N4F0 458 aa11.41□□□□□ -0.58
PTN-202ENST00000393083 OR51S1Q8NGJ8 323 aa11.41□□□□□ -0.58
PTN-202ENST00000393083 ITLN1Q8WWA0 313 aa11.41□□□□□ -0.58
PTN-202ENST00000393083 MAFIPQ8WZ33 124 aa11.41□□□□□ -0.58
PTN-202ENST00000393083 ST6GALNAC5Q9BVH7 336 aa11.41□□□□□ -0.58
PTN-202ENST00000393083 SPACA1Q9HBV2 294 aa11.41□□□□□ -0.58
PTN-202ENST00000393083 HES4Q9HCC6 221 aa11.41□□□□□ -0.58
PTN-202ENST00000393083 ZNF230Q9UIE0 474 aaPredicted RBP11.41□□□□□ -0.58
PTN-202ENST00000393083 DYSFO75923 2080 aa11.4□□□□□ -0.58
PTN-202ENST00000393083 DISC1C4P0D8 188 aa11.4□□□□□ -0.58
PTN-202ENST00000393083 M0R233 179 aa11.4□□□□□ -0.58
PTN-202ENST00000393083 HSPB6O14558 160 aa11.4□□□□□ -0.58
PTN-202ENST00000393083 TPD52L2O43399 206 aaKnown RBP11.4□□□□□ -0.58
PTN-202ENST00000393083 NDUFB6O95139 128 aa11.4□□□□□ -0.58
PTN-202ENST00000393083 IGHV1-46P01743 117 aa11.4□□□□□ -0.58
PTN-202ENST00000393083 PMP2P02689 132 aa11.4□□□□□ -0.58
PTN-202ENST00000393083 H2AFB2P0C5Z0 115 aa11.4□□□□□ -0.58
PTN-202ENST00000393083 ZNF44P15621 663 aa11.4□□□□□ -0.58
PTN-202ENST00000393083 GLRA1P23415 457 aa11.4□□□□□ -0.58
PTN-202ENST00000393083 DTYMKP23919 212 aa11.4□□□□□ -0.58
PTN-202ENST00000393083 PMELP40967 661 aa11.4□□□□□ -0.58
PTN-202ENST00000393083 BTG1P62324 171 aa11.4□□□□□ -0.58
PTN-202ENST00000393083 TNFAIP6P98066 277 aaPredicted RBP11.4□□□□□ -0.58
PTN-202ENST00000393083 RBMS2Q15434 407 aaKnown RBP11.4□□□□□ -0.58
PTN-202ENST00000393083 CARTPTQ16568 116 aa11.4□□□□□ -0.58
PTN-202ENST00000393083 TATDN3Q17R31 274 aa11.4□□□□□ -0.58
PTN-202ENST00000393083 Q5PR19 223 aa11.4□□□□□ -0.58
PTN-202ENST00000393083 SHEQ5VZ18 495 aa11.4□□□□□ -0.58
PTN-202ENST00000393083 SPNS3Q6ZMD2 512 aa11.4□□□□□ -0.58
PTN-202ENST00000393083 BEST4Q8NFU0 473 aa11.4□□□□□ -0.58
PTN-202ENST00000393083 OR4K15Q8NH41 348 aa11.4□□□□□ -0.58
PTN-202ENST00000393083 NEK7Q8TDX7 302 aa11.4□□□□□ -0.58
PTN-202ENST00000393083 LRRC29Q8WV35 223 aa11.4□□□□□ -0.58
PTN-202ENST00000393083 FN3KRPQ9HA64 309 aa11.4□□□□□ -0.58
PTN-202ENST00000393083 ZDHHC8Q9ULC8 765 aa11.4□□□□□ -0.58
PTN-202ENST00000393083 MCRIP1C9JLW8 97 aa11.39□□□□□ -0.59
PTN-202ENST00000393083 WNT9BO14905 357 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms