RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 MTCH2Q9Y6C9 303 aa2.95□□□□□ -1.94
XRN1-202ENST00000392981 NAV1Q8NEY1 1877 aa2.95□□□□□ -1.94
XRN1-202ENST00000392981 SLIT1O75093 1534 aa2.95□□□□□ -1.94
XRN1-202ENST00000392981 UBR2Q8IWV8 1755 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 IGHV4-61A0A0C4DH41 118 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 LINC01548A6NM66 108 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 BHLHE40O14503 412 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 TOXO94900 526 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 IFNA17P01571 189 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 IGHV4-59P01825 116 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 LINC00614P0C842 121 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 PPP1CCP36873 323 aaKnown RBP2.94□□□□□ -1.94
XRN1-202ENST00000392981 TAF6P49848 677 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 PDLIM4P50479 330 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 UBE2NP61088 152 aaKnown RBP2.94□□□□□ -1.94
XRN1-202ENST00000392981 PRDX4Q13162 271 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 WDR59Q6PJI9 974 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 SMARCD3Q6STE5 483 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 LINC00336Q6ZUF6 198 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 DDX60Q8IY21 1712 aaKnown RBP2.94□□□□□ -1.94
XRN1-202ENST00000392981 C8orf59Q8N0T1 100 aaPredicted RBP2.94□□□□□ -1.94
XRN1-202ENST00000392981 C4orf33Q8N1A6 199 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 ASB17Q8WXJ9 295 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 EBF4Q9BQW3 602 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 ZNF696Q9H7X3 374 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 LRRC37A3O60309 1634 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 AHDC1Q5TGY3 1603 aaPredicted RBP2.94□□□□□ -1.94
XRN1-202ENST00000392981 PLCH2O75038 1416 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 LOC102724200A0A096LPH7 203 aaPredicted RBP2.94□□□□□ -1.94
XRN1-202ENST00000392981 A0A0A6YYD5 115 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 ZNF705GA8MUZ8 300 aaPredicted RBP2.94□□□□□ -1.94
XRN1-202ENST00000392981 B4DXG7 233 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 NPIPB8E9PQR5 432 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 OR1I1O60431 355 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 SNAP91O60641 907 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 S1PR2O95136 353 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 IFNA1P01562 189 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 IGHV2-5P01817 119 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 ERP29P30040 261 aaKnown RBP2.94□□□□□ -1.94
XRN1-202ENST00000392981 EFNA3P52797 238 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 EFEMP1Q12805 493 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 IRF4Q15306 451 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 LRRC75BQ2VPJ9 315 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 ZNF324BQ6AW86 544 aaPredicted RBP2.94□□□□□ -1.94
XRN1-202ENST00000392981 TRPT1Q86TN4 253 aaKnown RBP2.94□□□□□ -1.94
XRN1-202ENST00000392981 C12orf45Q8N5I9 185 aaPredicted RBP2.94□□□□□ -1.94
XRN1-202ENST00000392981 TMEM54Q969K7 222 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 PPCDCQ96CD2 204 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 CCDC32Q9BV29 185 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 PARD6AQ9NPB6 346 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 C11orf21Q9P2W6 132 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 NDUFAF1Q9Y375 327 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 LOC100131303A0A0U1RQF7 123 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 RFPL4AA6NLU0 287 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 RFPL4AL1F8VTS6 287 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 M0R1B8 84 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 MED6O75586 246 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 TIMP1P01033 207 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 DBIP07108 87 aaKnown RBP2.94□□□□□ -1.94
XRN1-202ENST00000392981 COX7A1P24310 79 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 GPX4P36969 197 aaPredicted RBP2.94□□□□□ -1.94
XRN1-202ENST00000392981 CRYBA4P53673 196 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 TMBIM6P55061 237 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 OR10A3P58181 314 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 CDC42P60953 191 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 SSBP2P81877 361 aaPredicted RBP2.94□□□□□ -1.94
XRN1-202ENST00000392981 CD47Q08722 323 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 RPL13AP3Q6NVV1 102 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 OR10J5Q8NHC4 309 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 NEIL3Q8TAT5 605 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 ARHGDIGQ99819 225 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 ZNF2Q9BSG1 426 aaPredicted RBP2.94□□□□□ -1.94
XRN1-202ENST00000392981 TMEM30AQ9NV96 361 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 ZNF391Q9UJN7 358 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 VSIG4Q9Y279 399 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 RGS12O14924 1447 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 MYH11P35749 1972 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 COL22A1Q8NFW1 1626 aaPredicted RBP2.94□□□□□ -1.94
XRN1-202ENST00000392981 IGLV5-52A0A0A0MRZ9 124 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 PATE3B3GLJ2 98 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 ZNF207O43670 478 aaKnown RBP2.94□□□□□ -1.94
XRN1-202ENST00000392981 SNCGO76070 127 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 JUNBP17275 347 aaPredicted RBP2.94□□□□□ -1.94
XRN1-202ENST00000392981 AGTR1P30556 359 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 SDC2P34741 201 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 HRH1P35367 487 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 CDKN2AP42771 156 aaKnown RBP2.94□□□□□ -1.94
XRN1-202ENST00000392981 VEGFCP49767 419 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 MRPS10P82664 201 aaKnown RBP2.94□□□□□ -1.94
XRN1-202ENST00000392981 PTGES3Q15185 160 aaKnown RBP2.94□□□□□ -1.94
XRN1-202ENST00000392981 SLC25A35Q3KQZ1 300 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 ATP6AP1LQ52LC2 224 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 DOLPP1Q86YN1 238 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 TMEM151AQ8N4L1 468 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 VN1R17PQ8TDU5 208 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 URB1-AS1Q96HZ7 61 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 DUX3Q96PT4 197 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 HIST1H4GQ99525 98 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 RARRES3Q9UL19 164 aa2.94□□□□□ -1.94
XRN1-202ENST00000392981 A2MP01023 1474 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms