RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 S100A4P26447 101 aaKnown RBP11.56□□□□□ -0.56
LCA5-202ENST00000392959 MEOX1P50221 254 aa11.56□□□□□ -0.56
LCA5-202ENST00000392959 MGAT2Q10469 447 aa11.56□□□□□ -0.56
LCA5-202ENST00000392959 EIF3IQ13347 325 aaKnown RBP11.56□□□□□ -0.56
LCA5-202ENST00000392959 ZNF345Q14585 488 aa11.56□□□□□ -0.56
LCA5-202ENST00000392959 KHDC1LQ5JSQ8 128 aa11.56□□□□□ -0.56
LCA5-202ENST00000392959 SF3B5Q9BWJ5 86 aaKnown RBP11.56□□□□□ -0.56
LCA5-202ENST00000392959 CES1P1Q9UKY3 287 aa11.56□□□□□ -0.56
LCA5-202ENST00000392959 TRAV34A0A0B4J273 112 aa11.56□□□□□ -0.56
LCA5-202ENST00000392959 LRRC3CA6NJW4 275 aa11.56□□□□□ -0.56
LCA5-202ENST00000392959 RBP4P02753 201 aa11.56□□□□□ -0.56
LCA5-202ENST00000392959 CRYBA1P05813 215 aa11.56□□□□□ -0.56
LCA5-202ENST00000392959 EPHA8P29322 1005 aaPredicted RBP11.56□□□□□ -0.56
LCA5-202ENST00000392959 NANOS3P60323 173 aaKnown RBP11.56□□□□□ -0.56
LCA5-202ENST00000392959 SH2D2AQ9NP31 389 aa11.56□□□□□ -0.56
LCA5-202ENST00000392959 CENPVL1A0A0U1RR11 272 aa11.56□□□□□ -0.56
LCA5-202ENST00000392959 MFNGO00587 321 aa11.56□□□□□ -0.56
LCA5-202ENST00000392959 BGLAPP02818 100 aa11.56□□□□□ -0.56
LCA5-202ENST00000392959 ACAA2P42765 397 aaKnown RBP11.56□□□□□ -0.56
LCA5-202ENST00000392959 GAPTQ8N292 157 aa11.56□□□□□ -0.56
LCA5-202ENST00000392959 OR1L4Q8NGR5 311 aa11.56□□□□□ -0.56
LCA5-202ENST00000392959 FKBP11Q9NYL4 201 aa11.56□□□□□ -0.56
LCA5-202ENST00000392959 TNFSF18Q9UNG2 199 aa11.56□□□□□ -0.56
LCA5-202ENST00000392959 B4DEV8 164 aa11.55□□□□□ -0.56
LCA5-202ENST00000392959 ZNF205O95201 554 aa11.55□□□□□ -0.56
LCA5-202ENST00000392959 ZNF154Q13106 437 aa11.55□□□□□ -0.56
LCA5-202ENST00000392959 SSPNQ14714 243 aa11.55□□□□□ -0.56
LCA5-202ENST00000392959 MPV17LQ2QL34 196 aa11.55□□□□□ -0.56
LCA5-202ENST00000392959 ETFRF1Q6IPR1 90 aa11.55□□□□□ -0.56
LCA5-202ENST00000392959 WDR73Q6P4I2 378 aa11.55□□□□□ -0.56
LCA5-202ENST00000392959 ADAD2Q8NCV1 583 aaKnown RBP11.55□□□□□ -0.56
LCA5-202ENST00000392959 PCOLCE2Q9UKZ9 415 aa11.55□□□□□ -0.56
LCA5-202ENST00000392959 LYZL6O75951 148 aa11.55□□□□□ -0.56
LCA5-202ENST00000392959 OR2J3O76001 311 aa11.55□□□□□ -0.56
LCA5-202ENST00000392959 CRYABP02511 175 aaKnown RBP11.55□□□□□ -0.56
LCA5-202ENST00000392959 SEC11BP0C7V7 166 aa11.55□□□□□ -0.56
LCA5-202ENST00000392959 ZFP36L2P47974 494 aaKnown RBP11.55□□□□□ -0.56
LCA5-202ENST00000392959 FNDC7Q5VTL7 733 aa11.55□□□□□ -0.56
LCA5-202ENST00000392959 LYZL2Q7Z4W2 148 aa11.55□□□□□ -0.56
LCA5-202ENST00000392959 GPR87Q9BY21 358 aa11.55□□□□□ -0.56
LCA5-202ENST00000392959 MYOZ1Q9NP98 299 aaPredicted RBP11.55□□□□□ -0.56
LCA5-202ENST00000392959 MANBALQ9NQG1 85 aa11.55□□□□□ -0.56
LCA5-202ENST00000392959 PARP11Q9NR21 331 aa11.55□□□□□ -0.56
LCA5-202ENST00000392959 CCL28Q9NRJ3 127 aa11.55□□□□□ -0.56
LCA5-202ENST00000392959 PNPP00491 289 aa11.55□□□□□ -0.56
LCA5-202ENST00000392959 CRISP2P16562 243 aa11.55□□□□□ -0.56
LCA5-202ENST00000392959 RPS4Y1P22090 263 aaKnown RBP11.55□□□□□ -0.56
LCA5-202ENST00000392959 EWSR1Q01844 656 aaKnown RBP eCLIP11.55□□□□□ -0.56
LCA5-202ENST00000392959 OR4F17Q8NGA8 305 aa11.55□□□□□ -0.56
LCA5-202ENST00000392959 OR1A1Q9P1Q5 309 aa11.55□□□□□ -0.56
LCA5-202ENST00000392959 VAX2Q9UIW0 290 aa11.55□□□□□ -0.56
LCA5-202ENST00000392959 FZR1Q9UM11 496 aa11.55□□□□□ -0.56
LCA5-202ENST00000392959 DLK1P80370 383 aa11.55□□□□□ -0.56
LCA5-202ENST00000392959 OR10G8Q8NGN5 311 aa11.55□□□□□ -0.56
LCA5-202ENST00000392959 PTPMT1Q8WUK0 201 aaPredicted RBP11.55□□□□□ -0.56
LCA5-202ENST00000392959 CHAC2Q8WUX2 184 aa11.55□□□□□ -0.56
LCA5-202ENST00000392959 MISP3Q96FF7 219 aa11.55□□□□□ -0.56
LCA5-202ENST00000392959 CCDC88CQ9P219 2028 aa11.55□□□□□ -0.56
LCA5-202ENST00000392959 SIPA1L3O60292 1781 aaPredicted RBP11.54□□□□□ -0.56
LCA5-202ENST00000392959 ZNF785A8K8V0 405 aa11.54□□□□□ -0.56
LCA5-202ENST00000392959 K7EQS6 105 aa11.54□□□□□ -0.56
LCA5-202ENST00000392959 CAMPP49913 170 aa11.54□□□□□ -0.56
LCA5-202ENST00000392959 FOXO1Q12778 655 aa11.54□□□□□ -0.56
LCA5-202ENST00000392959 RPEL1Q2QD12 228 aa11.54□□□□□ -0.56
LCA5-202ENST00000392959 TMEM52Q8NDY8 209 aa11.54□□□□□ -0.56
LCA5-202ENST00000392959 OR10A7Q8NGE5 316 aa11.54□□□□□ -0.56
LCA5-202ENST00000392959 PTX4Q96A99 478 aa11.54□□□□□ -0.56
LCA5-202ENST00000392959 ADAT3Q96EY9 351 aaPredicted RBP11.54□□□□□ -0.56
LCA5-202ENST00000392959 OR6C3Q9NZP0 311 aa11.54□□□□□ -0.56
LCA5-202ENST00000392959 A0A1W2PN81 502 aa11.54□□□□□ -0.56
LCA5-202ENST00000392959 CD1AP06126 327 aa11.54□□□□□ -0.56
LCA5-202ENST00000392959 KIR2DS2P43631 304 aa11.54□□□□□ -0.56
LCA5-202ENST00000392959 TMEM211Q6ICI0 200 aa11.54□□□□□ -0.56
LCA5-202ENST00000392959 DHRS13Q6UX07 377 aa11.54□□□□□ -0.56
LCA5-202ENST00000392959 OR4S2Q8NH73 311 aa11.54□□□□□ -0.56
LCA5-202ENST00000392959 PRSS3P2Q8NHM4 247 aa11.54□□□□□ -0.56
LCA5-202ENST00000392959 SNX22Q96L94 193 aa11.54□□□□□ -0.56
LCA5-202ENST00000392959 PRSS27Q9BQR3 290 aa11.54□□□□□ -0.56
LCA5-202ENST00000392959 WNT16Q9UBV4 365 aa11.54□□□□□ -0.56
LCA5-202ENST00000392959 STRCQ7RTU9 1775 aa11.54□□□□□ -0.56
LCA5-202ENST00000392959 A0A087X0M5 115 aa11.54□□□□□ -0.56
LCA5-202ENST00000392959 TEX50A0A1B0GTY4 177 aa11.54□□□□□ -0.56
LCA5-202ENST00000392959 A0A1B0GX30 115 aa11.54□□□□□ -0.56
LCA5-202ENST00000392959 C11orf94C9JXX5 98 aa11.54□□□□□ -0.56
LCA5-202ENST00000392959 TCAPO15273 167 aa11.54□□□□□ -0.56
LCA5-202ENST00000392959 HLA-DQB1P01920 261 aa11.54□□□□□ -0.56
LCA5-202ENST00000392959 NHLH1Q02575 133 aa11.54□□□□□ -0.56
LCA5-202ENST00000392959 NHLH2Q02577 135 aa11.54□□□□□ -0.56
LCA5-202ENST00000392959 OR5D13Q8NGL4 314 aa11.54□□□□□ -0.56
LCA5-202ENST00000392959 ZNF596Q8TC21 504 aa11.54□□□□□ -0.56
LCA5-202ENST00000392959 MSL2Q9HCI7 577 aa11.54□□□□□ -0.56
LCA5-202ENST00000392959 hADV38S2A0JD32 116 aa11.54□□□□□ -0.56
LCA5-202ENST00000392959 IGHV3-13P01766 116 aa11.54□□□□□ -0.56
LCA5-202ENST00000392959 IGHV3-7P01780 117 aa11.54□□□□□ -0.56
LCA5-202ENST00000392959 PNLIPP16233 465 aa11.54□□□□□ -0.56
LCA5-202ENST00000392959 NAT1P18440 290 aa11.54□□□□□ -0.56
LCA5-202ENST00000392959 HTR1DP28221 377 aa11.54□□□□□ -0.56
LCA5-202ENST00000392959 GAB4Q2WGN9 574 aa11.54□□□□□ -0.56
LCA5-202ENST00000392959 TMEM65Q6PI78 240 aa11.54□□□□□ -0.56
LCA5-202ENST00000392959 BTNL3Q6UXE8 466 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms