RNA–Protein interactions for RNA: ENST00000390882.1

RNU6-440P-201, Transcript of RNA, U6 small nuclear 440, pseudogene, humanhuman

BASIC

Gene RNU6-440P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-440P-201ENST00000390882 CASTOR1Q8WTX7 329 aa0.68□□□□□ -2.3
RNU6-440P-201ENST00000390882 TWIST2Q8WVJ9 160 aa0.68□□□□□ -2.3
RNU6-440P-201ENST00000390882 NELFBQ8WX92 580 aa0.68□□□□□ -2.3
RNU6-440P-201ENST00000390882 CDKL2Q92772 493 aa0.68□□□□□ -2.3
RNU6-440P-201ENST00000390882 RAD51AP1Q96B01 352 aa0.68□□□□□ -2.3
RNU6-440P-201ENST00000390882 UBE2WQ96B02 151 aa0.68□□□□□ -2.3
RNU6-440P-201ENST00000390882 FMC1Q96HJ9 113 aa0.68□□□□□ -2.3
RNU6-440P-201ENST00000390882 ADTRPQ96IZ2 230 aa0.68□□□□□ -2.3
RNU6-440P-201ENST00000390882 ZNF396Q96N95 335 aaPredicted RBP0.68□□□□□ -2.3
RNU6-440P-201ENST00000390882 ANAPC13Q9BS18 74 aa0.68□□□□□ -2.3
RNU6-440P-201ENST00000390882 COPS4Q9BT78 406 aa0.68□□□□□ -2.3
RNU6-440P-201ENST00000390882 BEX2Q9BXY8 128 aa0.68□□□□□ -2.3
RNU6-440P-201ENST00000390882 ULBP1Q9BZM6 244 aa0.68□□□□□ -2.3
RNU6-440P-201ENST00000390882 ZNF436Q9C0F3 470 aaPredicted RBP0.68□□□□□ -2.3
RNU6-440P-201ENST00000390882 DNAJC27Q9NZQ0 273 aa0.68□□□□□ -2.3
RNU6-440P-201ENST00000390882 RBM12B-AS1Q9P1G2 102 aa0.68□□□□□ -2.3
RNU6-440P-201ENST00000390882 SAMHD1Q9Y3Z3 626 aaKnown RBP0.68□□□□□ -2.3
RNU6-440P-201ENST00000390882 FADS3Q9Y5Q0 445 aa0.68□□□□□ -2.3
RNU6-440P-201ENST00000390882 BZW2Q9Y6E2 419 aaKnown RBP0.68□□□□□ -2.3
RNU6-440P-201ENST00000390882 MYO16Q9Y6X6 1858 aa0.68□□□□□ -2.3
RNU6-440P-201ENST00000390882 TRBV24-1A0A075B6N3 115 aa0.67□□□□□ -2.3
RNU6-440P-201ENST00000390882 IGHV2-26A0A0B4J1V2 119 aa0.67□□□□□ -2.3
RNU6-440P-201ENST00000390882 A0A1B0GXF2 115 aa0.67□□□□□ -2.3
RNU6-440P-201ENST00000390882 RBFOX3A6NFN3 312 aa0.67□□□□□ -2.3
RNU6-440P-201ENST00000390882 C17orf51A8MQB3 221 aa0.67□□□□□ -2.3
RNU6-440P-201ENST00000390882 G3V3Q6 166 aa0.67□□□□□ -2.3
RNU6-440P-201ENST00000390882 J3QKU1 62 aa0.67□□□□□ -2.3
RNU6-440P-201ENST00000390882 M0QXV9 152 aa0.67□□□□□ -2.3
RNU6-440P-201ENST00000390882 SPOPO43791 374 aa0.67□□□□□ -2.3
RNU6-440P-201ENST00000390882 POP7O75817 140 aaKnown RBP0.67□□□□□ -2.3
RNU6-440P-201ENST00000390882 VAPBO95292 243 aa0.67□□□□□ -2.3
RNU6-440P-201ENST00000390882 GPR75O95800 540 aa0.67□□□□□ -2.3
RNU6-440P-201ENST00000390882 GABRA1P14867 456 aa0.67□□□□□ -2.3
RNU6-440P-201ENST00000390882 CBR1P16152 277 aa0.67□□□□□ -2.3
RNU6-440P-201ENST00000390882 CTLA4P16410 223 aa0.67□□□□□ -2.3
RNU6-440P-201ENST00000390882 M6PRP20645 277 aa0.67□□□□□ -2.3
RNU6-440P-201ENST00000390882 PTNP21246 168 aa0.67□□□□□ -2.3
RNU6-440P-201ENST00000390882 CSRP1P21291 193 aaKnown RBP0.67□□□□□ -2.3
RNU6-440P-201ENST00000390882 BGNP21810 368 aa0.67□□□□□ -2.3
RNU6-440P-201ENST00000390882 PSMD8P48556 350 aa0.67□□□□□ -2.3
RNU6-440P-201ENST00000390882 RAB38P57729 211 aa0.67□□□□□ -2.3
RNU6-440P-201ENST00000390882 GUSBP1Q15486 140 aa0.67□□□□□ -2.3
RNU6-440P-201ENST00000390882 CST6Q15828 149 aa0.67□□□□□ -2.3
RNU6-440P-201ENST00000390882 VAMP3Q15836 100 aa0.67□□□□□ -2.3
RNU6-440P-201ENST00000390882 GOLGA7BQ2TAP0 167 aa0.67□□□□□ -2.3
RNU6-440P-201ENST00000390882 HNRNPA1L2Q32P51 320 aaKnown RBP0.67□□□□□ -2.3
RNU6-440P-201ENST00000390882 ZCWPW2Q504Y3 356 aa0.67□□□□□ -2.3
RNU6-440P-201ENST00000390882 ACTBL2Q562R1 376 aa0.67□□□□□ -2.3
RNU6-440P-201ENST00000390882 SLC25A25Q6KCM7 469 aa0.67□□□□□ -2.3
RNU6-440P-201ENST00000390882 FAHD1Q6P587 224 aa0.67□□□□□ -2.3
RNU6-440P-201ENST00000390882 ERICH5Q6P6B1 374 aa0.67□□□□□ -2.3
RNU6-440P-201ENST00000390882 PID1Q7Z2X4 250 aa0.67□□□□□ -2.3
RNU6-440P-201ENST00000390882 FAM19A1Q7Z5A9 133 aa0.67□□□□□ -2.3
RNU6-440P-201ENST00000390882 LYPD6Q86Y78 171 aa0.67□□□□□ -2.3
RNU6-440P-201ENST00000390882 HS3ST5Q8IZT8 346 aa0.67□□□□□ -2.3
RNU6-440P-201ENST00000390882 SYS1Q8N2H4 156 aa0.67□□□□□ -2.3
RNU6-440P-201ENST00000390882 DRAXINQ8NBI3 349 aaPredicted RBP0.67□□□□□ -2.3
RNU6-440P-201ENST00000390882 Q8NDZ9 215 aa0.67□□□□□ -2.3
RNU6-440P-201ENST00000390882 CLHC1Q8NHS4 586 aa0.67□□□□□ -2.3
RNU6-440P-201ENST00000390882 LGALS14Q8TCE9 139 aa0.67□□□□□ -2.3
RNU6-440P-201ENST00000390882 CCL17Q92583 94 aa0.67□□□□□ -2.3
RNU6-440P-201ENST00000390882 MAL2Q969L2 176 aa0.67□□□□□ -2.3
RNU6-440P-201ENST00000390882 CPB2Q96IY4 423 aa0.67□□□□□ -2.3
RNU6-440P-201ENST00000390882 C20orf166-AS1Q96NR2 134 aa0.67□□□□□ -2.3
RNU6-440P-201ENST00000390882 KLF6Q99612 283 aaPredicted RBP0.67□□□□□ -2.3
RNU6-440P-201ENST00000390882 PITX2Q99697 317 aa0.67□□□□□ -2.3
RNU6-440P-201ENST00000390882 SLC25A31Q9H0C2 315 aa0.67□□□□□ -2.3
RNU6-440P-201ENST00000390882 POMKQ9H5K3 350 aa0.67□□□□□ -2.3
RNU6-440P-201ENST00000390882 CYB5R1Q9UHQ9 305 aa0.67□□□□□ -2.3
RNU6-440P-201ENST00000390882 MYO15BQ96JP2 1530 aa0.67□□□□□ -2.3
RNU6-440P-201ENST00000390882 SDK2Q58EX2 2172 aa0.67□□□□□ -2.3
RNU6-440P-201ENST00000390882 POLR3AO14802 1390 aaPredicted RBP0.67□□□□□ -2.3
RNU6-440P-201ENST00000390882 ADAMTS7Q9UKP4 1686 aa0.66□□□□□ -2.3
RNU6-440P-201ENST00000390882 STRCP1A6NGW2 1772 aa0.66□□□□□ -2.3
RNU6-440P-201ENST00000390882 TRAV8-3A0A0A6YYJ7 113 aa0.66□□□□□ -2.3
RNU6-440P-201ENST00000390882 A6NED7 52 aa0.66□□□□□ -2.3
RNU6-440P-201ENST00000390882 OR5H14A6NHG9 310 aa0.66□□□□□ -2.3
RNU6-440P-201ENST00000390882 ENSAO43768 121 aaKnown RBP0.66□□□□□ -2.3
RNU6-440P-201ENST00000390882 SC5DO75845 299 aa0.66□□□□□ -2.3
RNU6-440P-201ENST00000390882 SOX14O95416 240 aa0.66□□□□□ -2.3
RNU6-440P-201ENST00000390882 CA2P00918 260 aa0.66□□□□□ -2.3
RNU6-440P-201ENST00000390882 CSTAP01040 98 aa0.66□□□□□ -2.3
RNU6-440P-201ENST00000390882 GYPCP04921 128 aa0.66□□□□□ -2.3
RNU6-440P-201ENST00000390882 IGKV5-2P06315 115 aa0.66□□□□□ -2.3
RNU6-440P-201ENST00000390882 GIMD1P0DJR0 217 aa0.66□□□□□ -2.3
RNU6-440P-201ENST00000390882 SLC2A1P11166 492 aa0.66□□□□□ -2.3
RNU6-440P-201ENST00000390882 PSKH1P11801 424 aa0.66□□□□□ -2.3
RNU6-440P-201ENST00000390882 ZNF22P17026 224 aaPredicted RBP0.66□□□□□ -2.3
RNU6-440P-201ENST00000390882 GZMHP20718 246 aa0.66□□□□□ -2.3
RNU6-440P-201ENST00000390882 CPN2P22792 545 aa0.66□□□□□ -2.3
RNU6-440P-201ENST00000390882 PSMB9P28065 219 aa0.66□□□□□ -2.3
RNU6-440P-201ENST00000390882 RANBP1P43487 201 aa0.66□□□□□ -2.3
RNU6-440P-201ENST00000390882 CBX5P45973 191 aa0.66□□□□□ -2.3
RNU6-440P-201ENST00000390882 GCLMP48507 274 aa0.66□□□□□ -2.3
RNU6-440P-201ENST00000390882 TTPAP49638 278 aa0.66□□□□□ -2.3
RNU6-440P-201ENST00000390882 RAB25P57735 213 aa0.66□□□□□ -2.3
RNU6-440P-201ENST00000390882 C2orf80Q0P641 193 aa0.66□□□□□ -2.3
RNU6-440P-201ENST00000390882 MMDQ15546 238 aa0.66□□□□□ -2.3
RNU6-440P-201ENST00000390882 ZNF181Q2M3W8 571 aa0.66□□□□□ -2.3
RNU6-440P-201ENST00000390882 CAVIN4Q5BKX8 364 aa0.66□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms