RNA–Protein interactions for RNA: ENST00000389675.6

MRPL28-202, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL28, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-202ENST00000389675 A0A1W2PP11 408 aa13.4□□□□□ -0.26
MRPL28-202ENST00000389675 hCG_1809904A0A1W2PP81 198 aa13.4□□□□□ -0.26
MRPL28-202ENST00000389675 A0A1W2PPE2 198 aa13.4□□□□□ -0.26
MRPL28-202ENST00000389675 A0A1W2PR64 198 aa13.4□□□□□ -0.26
MRPL28-202ENST00000389675 A0A1W2PRV1 198 aa13.4□□□□□ -0.26
MRPL28-202ENST00000389675 hADV38S2A0JD32 116 aa13.4□□□□□ -0.26
MRPL28-202ENST00000389675 M0R1W7 72 aa13.4□□□□□ -0.26
MRPL28-202ENST00000389675 IGHV4-38-2P0DP08 117 aa13.4□□□□□ -0.26
MRPL28-202ENST00000389675 MMP9P14780 707 aa13.4□□□□□ -0.26
MRPL28-202ENST00000389675 LMO1P25800 156 aa13.4□□□□□ -0.26
MRPL28-202ENST00000389675 HTR2CP28335 458 aa13.4□□□□□ -0.26
MRPL28-202ENST00000389675 PSMD7P51665 324 aa13.4□□□□□ -0.26
MRPL28-202ENST00000389675 NHLRC3Q5JS37 347 aa13.4□□□□□ -0.26
MRPL28-202ENST00000389675 KLF17Q5JT82 389 aaPredicted RBP13.4□□□□□ -0.26
MRPL28-202ENST00000389675 C1orf100Q5SVJ3 147 aa13.4□□□□□ -0.26
MRPL28-202ENST00000389675 TMEM200BQ69YZ2 307 aa13.4□□□□□ -0.26
MRPL28-202ENST00000389675 TRAPPC6BQ86SZ2 158 aa13.4□□□□□ -0.26
MRPL28-202ENST00000389675 LINC00596Q86U02 117 aa13.4□□□□□ -0.26
MRPL28-202ENST00000389675 LYPD6Q86Y78 171 aa13.4□□□□□ -0.26
MRPL28-202ENST00000389675 TPRX1Q8N7U7 411 aa13.4□□□□□ -0.26
MRPL28-202ENST00000389675 OR6M1Q8NGM8 313 aa13.4□□□□□ -0.26
MRPL28-202ENST00000389675 C22orf15Q8WYQ4 148 aa13.4□□□□□ -0.26
MRPL28-202ENST00000389675 LHX4Q969G2 390 aa13.4□□□□□ -0.26
MRPL28-202ENST00000389675 MRPS24Q96EL2 167 aaKnown RBP13.4□□□□□ -0.26
MRPL28-202ENST00000389675 TBX15Q96SF7 602 aa13.4□□□□□ -0.26
MRPL28-202ENST00000389675 SELENOIQ9C0D9 397 aa13.4□□□□□ -0.26
MRPL28-202ENST00000389675 BANF2Q9H503 90 aa13.4□□□□□ -0.26
MRPL28-202ENST00000389675 SIRT7Q9NRC8 400 aa13.4□□□□□ -0.26
MRPL28-202ENST00000389675 ING3Q9NXR8 418 aa13.4□□□□□ -0.26
MRPL28-202ENST00000389675 MEX3AA1L020 520 aaKnown RBP13.39□□□□□ -0.27
MRPL28-202ENST00000389675 GEMIN2O14893 280 aaKnown RBP13.39□□□□□ -0.27
MRPL28-202ENST00000389675 MGMTP16455 207 aa13.39□□□□□ -0.27
MRPL28-202ENST00000389675 CD36P16671 472 aa13.39□□□□□ -0.27
MRPL28-202ENST00000389675 RANBP1P43487 201 aa13.39□□□□□ -0.27
MRPL28-202ENST00000389675 P2RX3P56373 397 aa13.39□□□□□ -0.27
MRPL28-202ENST00000389675 MEF2CQ06413 473 aaPredicted RBP13.39□□□□□ -0.27
MRPL28-202ENST00000389675 ATXN7L3Q14CW9 347 aaPredicted RBP13.39□□□□□ -0.27
MRPL28-202ENST00000389675 RAB11BQ15907 218 aa13.39□□□□□ -0.27
MRPL28-202ENST00000389675 TAF9Q16594 264 aa13.39□□□□□ -0.27
MRPL28-202ENST00000389675 MPV17LQ2QL34 196 aa13.39□□□□□ -0.27
MRPL28-202ENST00000389675 ATAD3CQ5T2N8 411 aa13.39□□□□□ -0.27
MRPL28-202ENST00000389675 ZNF418Q8TF45 676 aaPredicted RBP13.39□□□□□ -0.27
MRPL28-202ENST00000389675 FAM46BQ96A09 425 aa13.39□□□□□ -0.27
MRPL28-202ENST00000389675 METTL8Q9H825 291 aaKnown RBP13.39□□□□□ -0.27
MRPL28-202ENST00000389675 COL6A5A8TX70 2615 aa13.38□□□□□ -0.27
MRPL28-202ENST00000389675 TRAV1-2A0A0B4J238 106 aa13.38□□□□□ -0.27
MRPL28-202ENST00000389675 LOC100506127A0A0U1RQW1 187 aa13.38□□□□□ -0.27
MRPL28-202ENST00000389675 SLC22A1O15245 554 aa13.38□□□□□ -0.27
MRPL28-202ENST00000389675 MPIG6BO95866 241 aa13.38□□□□□ -0.27
MRPL28-202ENST00000389675 CCL3L1P16619 93 aa13.38□□□□□ -0.27
MRPL28-202ENST00000389675 ERP29P30040 261 aaKnown RBP13.38□□□□□ -0.27
MRPL28-202ENST00000389675 AESQ08117 197 aa13.38□□□□□ -0.27
MRPL28-202ENST00000389675 ZNF273Q14593 569 aa13.38□□□□□ -0.27
MRPL28-202ENST00000389675 P2RY14Q15391 338 aa13.38□□□□□ -0.27
MRPL28-202ENST00000389675 KRBOX4Q5JUW0 171 aa13.38□□□□□ -0.27
MRPL28-202ENST00000389675 C1orf122Q6ZSJ8 110 aa13.38□□□□□ -0.27
MRPL28-202ENST00000389675 PDZD9Q8IXQ8 264 aa13.38□□□□□ -0.27
MRPL28-202ENST00000389675 Q8N7P7 452 aa13.38□□□□□ -0.27
MRPL28-202ENST00000389675 TMEM104Q8NE00 496 aa13.38□□□□□ -0.27
MRPL28-202ENST00000389675 NEK7Q8TDX7 302 aa13.38□□□□□ -0.27
MRPL28-202ENST00000389675 SLC6A7Q99884 636 aa13.38□□□□□ -0.27
MRPL28-202ENST00000389675 CHCHD6Q9BRQ6 235 aa13.38□□□□□ -0.27
MRPL28-202ENST00000389675 OR51E2Q9H255 320 aa13.38□□□□□ -0.27
MRPL28-202ENST00000389675 TXNL4BQ9NX01 149 aaKnown RBP13.38□□□□□ -0.27
MRPL28-202ENST00000389675 ZNF69Q9UC07 566 aa13.38□□□□□ -0.27
MRPL28-202ENST00000389675 V9GY05 133 aa13.38□□□□□ -0.27
MRPL28-202ENST00000389675 TRGV10A0A0A0MS01 117 aa13.37□□□□□ -0.27
MRPL28-202ENST00000389675 TRAV24A0A0B4J272 114 aa13.37□□□□□ -0.27
MRPL28-202ENST00000389675 CENPVL3A0A0U1RRI6 287 aa13.37□□□□□ -0.27
MRPL28-202ENST00000389675 SLC17A2O00624 439 aa13.37□□□□□ -0.27
MRPL28-202ENST00000389675 BPNT1O95861 308 aa13.37□□□□□ -0.27
MRPL28-202ENST00000389675 CSN2P05814 226 aa13.37□□□□□ -0.27
MRPL28-202ENST00000389675 ZNF728P0DKX0 622 aa13.37□□□□□ -0.27
MRPL28-202ENST00000389675 RAB3BP20337 219 aa13.37□□□□□ -0.27
MRPL28-202ENST00000389675 FGF9P31371 208 aaPredicted RBP13.37□□□□□ -0.27
MRPL28-202ENST00000389675 NCR3LG1Q68D85 454 aa13.37□□□□□ -0.27
MRPL28-202ENST00000389675 RBMS3Q6XE24 437 aaKnown RBP13.37□□□□□ -0.27
MRPL28-202ENST00000389675 BRD3OSQ6XYD6 125 aa13.37□□□□□ -0.27
MRPL28-202ENST00000389675 SUMF2Q8NBJ7 301 aa13.37□□□□□ -0.27
MRPL28-202ENST00000389675 KCNG3Q8TAE7 436 aa13.37□□□□□ -0.27
MRPL28-202ENST00000389675 C1orf147Q96MC9 270 aaPredicted RBP13.37□□□□□ -0.27
MRPL28-202ENST00000389675 ZNF714Q96N38 554 aa13.37□□□□□ -0.27
MRPL28-202ENST00000389675 GFI1Q99684 422 aa13.37□□□□□ -0.27
MRPL28-202ENST00000389675 DPCDQ9BVM2 203 aaPredicted RBP13.37□□□□□ -0.27
MRPL28-202ENST00000389675 SUCNR1Q9BXA5 334 aa13.37□□□□□ -0.27
MRPL28-202ENST00000389675 TMEM59Q9BXS4 323 aa13.37□□□□□ -0.27
MRPL28-202ENST00000389675 BARHL1Q9BZE3 327 aa13.37□□□□□ -0.27
MRPL28-202ENST00000389675 IFT22Q9H7X7 185 aa13.37□□□□□ -0.27
MRPL28-202ENST00000389675 SPACA1Q9HBV2 294 aa13.37□□□□□ -0.27
MRPL28-202ENST00000389675 LINC00312Q9Y6C7 94 aa13.37□□□□□ -0.27
MRPL28-202ENST00000389675 CUBNO60494 3623 aa13.37□□□□□ -0.27
MRPL28-202ENST00000389675 IGHV1-69DA0A0B4J2H0 117 aa13.36□□□□□ -0.27
MRPL28-202ENST00000389675 TCF21O43680 179 aa13.36□□□□□ -0.27
MRPL28-202ENST00000389675 IGHV1-69P01742 117 aa13.36□□□□□ -0.27
MRPL28-202ENST00000389675 VSIG8P0DPA2 414 aa13.36□□□□□ -0.27
MRPL28-202ENST00000389675 ARSBP15848 533 aa13.36□□□□□ -0.27
MRPL28-202ENST00000389675 PRTN3P24158 256 aa13.36□□□□□ -0.27
MRPL28-202ENST00000389675 GADD45AP24522 165 aa13.36□□□□□ -0.27
MRPL28-202ENST00000389675 GLIPR1P48060 266 aa13.36□□□□□ -0.27
MRPL28-202ENST00000389675 KCNJ3P48549 501 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms