RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 FABP6P51161 128 aa21.41■■□□□ 1.02
SHOX2-201ENST00000389589 ZNF83P51522 516 aa21.41■■□□□ 1.02
SHOX2-201ENST00000389589 SLC9A3R2Q15599 337 aa21.41■■□□□ 1.02
SHOX2-201ENST00000389589 IGFBP7Q16270 282 aa21.41■■□□□ 1.02
SHOX2-201ENST00000389589 OR8H1Q8NGG4 311 aa21.41■■□□□ 1.02
SHOX2-201ENST00000389589 DPCDQ9BVM2 203 aaPredicted RBP21.41■■□□□ 1.02
SHOX2-201ENST00000389589 FXYD6Q9H0Q3 95 aa21.41■■□□□ 1.02
SHOX2-201ENST00000389589 RAB18Q9NP72 206 aa21.41■■□□□ 1.02
SHOX2-201ENST00000389589 ZNF835Q9Y2P0 537 aa21.41■■□□□ 1.02
SHOX2-201ENST00000389589 SPEF1Q9Y4P9 236 aa21.41■■□□□ 1.02
SHOX2-201ENST00000389589 TRBV6-6A0A0A6YYG2 114 aa21.41■■□□□ 1.02
SHOX2-201ENST00000389589 KIR2DS1A0A191URI9 304 aa21.41■■□□□ 1.02
SHOX2-201ENST00000389589 M0R233 179 aa21.41■■□□□ 1.02
SHOX2-201ENST00000389589 CDIPTO14735 213 aa21.41■■□□□ 1.02
SHOX2-201ENST00000389589 DEGS1O15121 323 aa21.41■■□□□ 1.02
SHOX2-201ENST00000389589 MLNRO43193 412 aa21.41■■□□□ 1.02
SHOX2-201ENST00000389589 KNG1P01042 644 aa21.41■■□□□ 1.02
SHOX2-201ENST00000389589 CXCL2P19875 107 aa21.41■■□□□ 1.02
SHOX2-201ENST00000389589 KIR2DS4P43632 304 aa21.41■■□□□ 1.02
SHOX2-201ENST00000389589 KIR2DS1Q14954 304 aa21.41■■□□□ 1.02
SHOX2-201ENST00000389589 GSG1LQ6UXU4 331 aa21.41■■□□□ 1.02
SHOX2-201ENST00000389589 TRAV24A0A0B4J272 114 aa21.4■■□□□ 1.02
SHOX2-201ENST00000389589 POM121CA8CG34 1229 aa21.4■■□□□ 1.02
SHOX2-201ENST00000389589 NOS1APO75052 506 aaPredicted RBP21.4■■□□□ 1.02
SHOX2-201ENST00000389589 GRPP07492 148 aa21.4■■□□□ 1.02
SHOX2-201ENST00000389589 UCP3P55916 312 aa21.4■■□□□ 1.02
SHOX2-201ENST00000389589 RGS7BPQ6MZT1 257 aaPredicted RBP21.4■■□□□ 1.02
SHOX2-201ENST00000389589 TEX261Q6UWH6 196 aa21.4■■□□□ 1.02
SHOX2-201ENST00000389589 MRGPRGQ86SM5 289 aa21.4■■□□□ 1.02
SHOX2-201ENST00000389589 SGPP2Q8IWX5 399 aa21.4■■□□□ 1.02
SHOX2-201ENST00000389589 U3KQ87 197 aa21.4■■□□□ 1.02
SHOX2-201ENST00000389589 PTPRQQ9UMZ3 2332 aa21.4■■□□□ 1.02
SHOX2-201ENST00000389589 FAM25EA8MYX2 175 aa21.4■■□□□ 1.02
SHOX2-201ENST00000389589 M0R1B8 84 aa21.4■■□□□ 1.02
SHOX2-201ENST00000389589 BMP5P22003 454 aa21.4■■□□□ 1.02
SHOX2-201ENST00000389589 CYCSP99999 105 aaKnown RBP21.4■■□□□ 1.02
SHOX2-201ENST00000389589 MZT1Q08AG7 82 aa21.4■■□□□ 1.02
SHOX2-201ENST00000389589 Q6P435 159 aa21.4■■□□□ 1.02
SHOX2-201ENST00000389589 SLC7A5P1Q8MH63 180 aa21.4■■□□□ 1.02
SHOX2-201ENST00000389589 MOB3AQ96BX8 217 aa21.4■■□□□ 1.02
SHOX2-201ENST00000389589 PIK3IP1Q96FE7 263 aa21.4■■□□□ 1.02
SHOX2-201ENST00000389589 TRAV14DV4A0A0A6YYC5 116 aa21.39■■□□□ 1.01
SHOX2-201ENST00000389589 HSPB6O14558 160 aa21.39■■□□□ 1.01
SHOX2-201ENST00000389589 HS3ST1O14792 307 aa21.39■■□□□ 1.01
SHOX2-201ENST00000389589 ARPC5O15511 151 aa21.39■■□□□ 1.01
SHOX2-201ENST00000389589 NXPH2O95156 264 aa21.39■■□□□ 1.01
SHOX2-201ENST00000389589 IFNA2P01563 188 aa21.39■■□□□ 1.01
SHOX2-201ENST00000389589 CRYAAP02489 173 aa21.39■■□□□ 1.01
SHOX2-201ENST00000389589 MDH2P40926 338 aaKnown RBP21.39■■□□□ 1.01
SHOX2-201ENST00000389589 OPCMLQ14982 345 aa21.39■■□□□ 1.01
SHOX2-201ENST00000389589 FIP1L1Q6UN15 594 aaKnown RBP21.39■■□□□ 1.01
SHOX2-201ENST00000389589 SNRNP40Q96DI7 357 aaKnown RBP21.39■■□□□ 1.01
SHOX2-201ENST00000389589 SEC22AQ96IW7 307 aa21.39■■□□□ 1.01
SHOX2-201ENST00000389589 USB1Q9BQ65 265 aaKnown RBP21.39■■□□□ 1.01
SHOX2-201ENST00000389589 A0A1B0GWJ7 208 aa21.38■■□□□ 1.01
SHOX2-201ENST00000389589 CRYM-AS1A6NIL9 109 aa21.38■■□□□ 1.01
SHOX2-201ENST00000389589 TRDCB7Z8K6 153 aa21.38■■□□□ 1.01
SHOX2-201ENST00000389589 EEF1E1-BLOC1S5C9J1V9 151 aa21.38■■□□□ 1.01
SHOX2-201ENST00000389589 CTXN2P0C2S0 81 aa21.38■■□□□ 1.01
SHOX2-201ENST00000389589 ZNF44P15621 663 aa21.38■■□□□ 1.01
SHOX2-201ENST00000389589 HERV-K104P61576 105 aa21.38■■□□□ 1.01
SHOX2-201ENST00000389589 ZNF146Q15072 292 aa21.38■■□□□ 1.01
SHOX2-201ENST00000389589 ANKRD55Q3KP44 614 aa21.38■■□□□ 1.01
SHOX2-201ENST00000389589 SPIN3Q5JUX0 258 aa21.38■■□□□ 1.01
SHOX2-201ENST00000389589 POC1AQ8NBT0 407 aa21.38■■□□□ 1.01
SHOX2-201ENST00000389589 RDH5Q92781 318 aa21.38■■□□□ 1.01
SHOX2-201ENST00000389589 TOMM40LQ969M1 308 aa21.38■■□□□ 1.01
SHOX2-201ENST00000389589 TREM2Q9NZC2 230 aa21.38■■□□□ 1.01
SHOX2-201ENST00000389589 ATP23Q9Y6H3 246 aa21.38■■□□□ 1.01
SHOX2-201ENST00000389589 A0A0G2JNJ9 132 aa21.38■■□□□ 1.01
SHOX2-201ENST00000389589 C5orf51A6NDU8 294 aa21.38■■□□□ 1.01
SHOX2-201ENST00000389589 RPA2P15927 270 aa21.38■■□□□ 1.01
SHOX2-201ENST00000389589 SERPINF1P36955 418 aa21.38■■□□□ 1.01
SHOX2-201ENST00000389589 TMEM65Q6PI78 240 aa21.38■■□□□ 1.01
SHOX2-201ENST00000389589 SLC38A6Q8IZM9 456 aa21.38■■□□□ 1.01
SHOX2-201ENST00000389589 NMES1Q9C002 83 aa21.38■■□□□ 1.01
SHOX2-201ENST00000389589 TLNRD1Q9H1K6 362 aa21.38■■□□□ 1.01
SHOX2-201ENST00000389589 Q9UFV3 132 aa21.38■■□□□ 1.01
SHOX2-201ENST00000389589 FZR1Q9UM11 496 aa21.38■■□□□ 1.01
SHOX2-201ENST00000389589 FAM87AP0C7U9 286 aa21.37■■□□□ 1.01
SHOX2-201ENST00000389589 SLC25A4P12235 298 aa21.37■■□□□ 1.01
SHOX2-201ENST00000389589 ABCA11PQ4W5N1 156 aa21.37■■□□□ 1.01
SHOX2-201ENST00000389589 Q6ZR03 302 aa21.37■■□□□ 1.01
SHOX2-201ENST00000389589 MRPL30Q8TCC3 161 aaKnown RBP21.37■■□□□ 1.01
SHOX2-201ENST00000389589 ELOVL5Q9NYP7 299 aa21.37■■□□□ 1.01
SHOX2-201ENST00000389589 TUBD1Q9UJT1 453 aa21.37■■□□□ 1.01
SHOX2-201ENST00000389589 SHANK1Q9Y566 2161 aa21.37■■□□□ 1.01
SHOX2-201ENST00000389589 DMXL2Q8TDJ6 3036 aa21.37■■□□□ 1.01
SHOX2-201ENST00000389589 TEX13DA0A0J9YY54 714 aaPredicted RBP21.36■■□□□ 1.01
SHOX2-201ENST00000389589 H7C1Q1 480 aa21.36■■□□□ 1.01
SHOX2-201ENST00000389589 DLL1O00548 723 aa21.36■■□□□ 1.01
SHOX2-201ENST00000389589 SH2D1BO14796 132 aa21.36■■□□□ 1.01
SHOX2-201ENST00000389589 TK1P04183 234 aa21.36■■□□□ 1.01
SHOX2-201ENST00000389589 S100A11P31949 105 aa21.36■■□□□ 1.01
SHOX2-201ENST00000389589 RBMXP38159 391 aaKnown RBP21.36■■□□□ 1.01
SHOX2-201ENST00000389589 FXYD4P59646 89 aa21.36■■□□□ 1.01
SHOX2-201ENST00000389589 RBPJQ06330 500 aa21.36■■□□□ 1.01
SHOX2-201ENST00000389589 IGSF11Q5DX21 431 aa21.36■■□□□ 1.01
SHOX2-201ENST00000389589 SHEQ5VZ18 495 aa21.36■■□□□ 1.01
SHOX2-201ENST00000389589 ZNF680Q8NEM1 530 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms