RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 NAGKQ9UJ70 344 aa12.75□□□□□ -0.37
VPS9D1-201ENST00000389386 MCTS1Q9ULC4 181 aaKnown RBP12.75□□□□□ -0.37
VPS9D1-201ENST00000389386 RUNX1Q01196 453 aa12.75□□□□□ -0.37
VPS9D1-201ENST00000389386 HHEXQ03014 270 aa12.75□□□□□ -0.37
VPS9D1-201ENST00000389386 C1QL2Q7Z5L3 287 aa12.75□□□□□ -0.37
VPS9D1-201ENST00000389386 BAHD1Q8TBE0 780 aaPredicted RBP12.75□□□□□ -0.37
VPS9D1-201ENST00000389386 TMEM37Q8WXS4 190 aa12.75□□□□□ -0.37
VPS9D1-201ENST00000389386 TSLPQ969D9 159 aa12.75□□□□□ -0.37
VPS9D1-201ENST00000389386 SLAMF6Q96DU3 332 aa12.75□□□□□ -0.37
VPS9D1-201ENST00000389386 GPER1Q99527 375 aa12.75□□□□□ -0.37
VPS9D1-201ENST00000389386 CISD1Q9NZ45 108 aaKnown RBP12.75□□□□□ -0.37
VPS9D1-201ENST00000389386 LRP4O75096 1905 aa12.75□□□□□ -0.37
VPS9D1-201ENST00000389386 CPAMD8Q8IZJ3 1885 aa12.75□□□□□ -0.37
VPS9D1-201ENST00000389386 PLPP3O14495 311 aa12.75□□□□□ -0.37
VPS9D1-201ENST00000389386 TNFRSF10CO14798 259 aa12.75□□□□□ -0.37
VPS9D1-201ENST00000389386 JMJD7P0C870 316 aa12.75□□□□□ -0.37
VPS9D1-201ENST00000389386 GNB2P62879 340 aa12.75□□□□□ -0.37
VPS9D1-201ENST00000389386 ARL6IP1Q15041 203 aa12.75□□□□□ -0.37
VPS9D1-201ENST00000389386 ARMC6Q6NXE6 501 aa12.75□□□□□ -0.37
VPS9D1-201ENST00000389386 OGFOD3Q6PK18 319 aa12.75□□□□□ -0.37
VPS9D1-201ENST00000389386 GBGT1Q8N5D6 347 aa12.75□□□□□ -0.37
VPS9D1-201ENST00000389386 TOMM40LQ969M1 308 aa12.75□□□□□ -0.37
VPS9D1-201ENST00000389386 RTN4RQ9BZR6 473 aa12.75□□□□□ -0.37
VPS9D1-201ENST00000389386 PCNX3Q9H6A9 2034 aa12.74□□□□□ -0.37
VPS9D1-201ENST00000389386 PROB1E7EW31 1015 aa12.74□□□□□ -0.37
VPS9D1-201ENST00000389386 UTS2O95399 124 aa12.74□□□□□ -0.37
VPS9D1-201ENST00000389386 CEACAM1P13688 526 aa12.74□□□□□ -0.37
VPS9D1-201ENST00000389386 HLA-DOBP13765 273 aa12.74□□□□□ -0.37
VPS9D1-201ENST00000389386 OR10J1P30954 320 aa12.74□□□□□ -0.37
VPS9D1-201ENST00000389386 RBX1P62877 108 aa12.74□□□□□ -0.37
VPS9D1-201ENST00000389386 VAMP2P63027 116 aa12.74□□□□□ -0.37
VPS9D1-201ENST00000389386 CDCP2Q5VXM1 449 aa12.74□□□□□ -0.37
VPS9D1-201ENST00000389386 DPPA3Q6W0C5 159 aa12.74□□□□□ -0.37
VPS9D1-201ENST00000389386 LGI3Q8N145 548 aa12.74□□□□□ -0.37
VPS9D1-201ENST00000389386 OR5C1Q8NGR4 320 aa12.74□□□□□ -0.37
VPS9D1-201ENST00000389386 SSC4DQ8WTU2 575 aa12.74□□□□□ -0.37
VPS9D1-201ENST00000389386 PLEKHF2Q9H8W4 249 aa12.74□□□□□ -0.37
VPS9D1-201ENST00000389386 GLRX2Q9NS18 164 aa12.74□□□□□ -0.37
VPS9D1-201ENST00000389386 BDP1A6H8Y1 2624 aa12.74□□□□□ -0.37
VPS9D1-201ENST00000389386 IGKV1D-43A0A0B4J1Z2 117 aa12.74□□□□□ -0.37
VPS9D1-201ENST00000389386 TRDCB7Z8K6 153 aa12.74□□□□□ -0.37
VPS9D1-201ENST00000389386 SIAH2O43255 324 aa12.74□□□□□ -0.37
VPS9D1-201ENST00000389386 TCF21O43680 179 aa12.74□□□□□ -0.37
VPS9D1-201ENST00000389386 IL6RP08887 468 aaPredicted RBP12.74□□□□□ -0.37
VPS9D1-201ENST00000389386 ZNF728P0DKX0 622 aa12.74□□□□□ -0.37
VPS9D1-201ENST00000389386 FUT7Q11130 342 aa12.74□□□□□ -0.37
VPS9D1-201ENST00000389386 MPV17LQ2QL34 196 aa12.74□□□□□ -0.37
VPS9D1-201ENST00000389386 ABCA11PQ4W5N1 156 aa12.74□□□□□ -0.37
VPS9D1-201ENST00000389386 TMEM252Q8N6L7 170 aa12.74□□□□□ -0.37
VPS9D1-201ENST00000389386 OR51G1Q8NGK1 321 aa12.74□□□□□ -0.37
VPS9D1-201ENST00000389386 OR10S1Q8NGN2 331 aa12.74□□□□□ -0.37
VPS9D1-201ENST00000389386 PTPMT1Q8WUK0 201 aaPredicted RBP12.74□□□□□ -0.37
VPS9D1-201ENST00000389386 MRGPRX4Q96LA9 322 aa12.74□□□□□ -0.37
VPS9D1-201ENST00000389386 SPTY2D1-AS1A0A0U1RR47 76 aa12.73□□□□□ -0.37
VPS9D1-201ENST00000389386 BCL2P10415 239 aa12.73□□□□□ -0.37
VPS9D1-201ENST00000389386 ZNF17P17021 662 aa12.73□□□□□ -0.37
VPS9D1-201ENST00000389386 CD82P27701 267 aa12.73□□□□□ -0.37
VPS9D1-201ENST00000389386 ERVS71-1P61550 626 aa12.73□□□□□ -0.37
VPS9D1-201ENST00000389386 YPEL5P62699 121 aa12.73□□□□□ -0.37
VPS9D1-201ENST00000389386 C16orf82Q7Z2V1 217 aa12.73□□□□□ -0.37
VPS9D1-201ENST00000389386 CPEB2Q7Z5Q1 589 aaKnown RBP12.73□□□□□ -0.37
VPS9D1-201ENST00000389386 WDFY1Q8IWB7 410 aa12.73□□□□□ -0.37
VPS9D1-201ENST00000389386 HDHD3Q9BSH5 251 aaPredicted RBP12.73□□□□□ -0.37
VPS9D1-201ENST00000389386 ANXA10Q9UJ72 324 aa12.73□□□□□ -0.37
VPS9D1-201ENST00000389386 PHF3Q92576 2039 aaKnown RBP12.73□□□□□ -0.37
VPS9D1-201ENST00000389386 C17orf51A8MQB3 221 aa12.73□□□□□ -0.37
VPS9D1-201ENST00000389386 MSTNO14793 375 aa12.73□□□□□ -0.37
VPS9D1-201ENST00000389386 ONECUT2O95948 504 aa12.73□□□□□ -0.37
VPS9D1-201ENST00000389386 TUBG1P23258 451 aa12.73□□□□□ -0.37
VPS9D1-201ENST00000389386 DYNLT3P51808 116 aa12.73□□□□□ -0.37
VPS9D1-201ENST00000389386 OR5I1Q13606 314 aa12.73□□□□□ -0.37
VPS9D1-201ENST00000389386 PHLDA2Q53GA4 152 aa12.73□□□□□ -0.37
VPS9D1-201ENST00000389386 DGAT2Q96PD7 388 aa12.73□□□□□ -0.37
VPS9D1-201ENST00000389386 TBL1XR1Q9BZK7 514 aa12.73□□□□□ -0.37
VPS9D1-201ENST00000389386 B3GALT1Q9Y5Z6 326 aa12.73□□□□□ -0.37
VPS9D1-201ENST00000389386 IGKV1-9A0A0C4DH69 117 aa12.72□□□□□ -0.37
VPS9D1-201ENST00000389386 A0A0J9YY10 115 aa12.72□□□□□ -0.37
VPS9D1-201ENST00000389386 ZFP92A6NM28 416 aa12.72□□□□□ -0.37
VPS9D1-201ENST00000389386 NPIPB7O75200 414 aa12.72□□□□□ -0.37
VPS9D1-201ENST00000389386 ZNF205O95201 554 aa12.72□□□□□ -0.37
VPS9D1-201ENST00000389386 LCATP04180 440 aa12.72□□□□□ -0.37
VPS9D1-201ENST00000389386 TMEM225BP0DP42 221 aa12.72□□□□□ -0.37
VPS9D1-201ENST00000389386 SLC6A8P48029 635 aa12.72□□□□□ -0.37
VPS9D1-201ENST00000389386 IDH3GP51553 393 aaPredicted RBP12.72□□□□□ -0.37
VPS9D1-201ENST00000389386 CARD18P57730 90 aa12.72□□□□□ -0.37
VPS9D1-201ENST00000389386 FAM3BP58499 235 aaPredicted RBP12.72□□□□□ -0.37
VPS9D1-201ENST00000389386 DCAF7P61962 342 aa12.72□□□□□ -0.37
VPS9D1-201ENST00000389386 PRSS8Q16651 343 aa12.72□□□□□ -0.37
VPS9D1-201ENST00000389386 ACTL10Q5JWF8 245 aa12.72□□□□□ -0.37
VPS9D1-201ENST00000389386 KIAA0895LQ68EN5 471 aa12.72□□□□□ -0.37
VPS9D1-201ENST00000389386 DNM1P34Q6PK57 102 aa12.72□□□□□ -0.37
VPS9D1-201ENST00000389386 ODF3L1Q8IXM7 274 aa12.72□□□□□ -0.37
VPS9D1-201ENST00000389386 NECAP1Q8NC96 275 aa12.72□□□□□ -0.37
VPS9D1-201ENST00000389386 OR5D18Q8NGL1 313 aa12.72□□□□□ -0.37
VPS9D1-201ENST00000389386 OR5L1Q8NGL2 311 aa12.72□□□□□ -0.37
VPS9D1-201ENST00000389386 WFIKKN1Q96NZ8 548 aa12.72□□□□□ -0.37
VPS9D1-201ENST00000389386 MIEN1Q9BRT3 115 aa12.72□□□□□ -0.37
VPS9D1-201ENST00000389386 PCGF1Q9BSM1 259 aa12.72□□□□□ -0.37
VPS9D1-201ENST00000389386 FUT9Q9Y231 359 aa12.72□□□□□ -0.37
VPS9D1-201ENST00000389386 CHTOPQ9Y3Y2 248 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms