RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 PRR27Q6MZM9 219 aa15.05■□□□□ -0
SGCB-201ENST00000381431 LIAT1Q6ZQX7 453 aa15.05■□□□□ -0
SGCB-201ENST00000381431 GAPTQ8N292 157 aa15.05■□□□□ -0
SGCB-201ENST00000381431 TXN2Q99757 166 aa15.05■□□□□ -0
SGCB-201ENST00000381431 CHST5Q9GZS9 411 aa15.05■□□□□ -0
SGCB-201ENST00000381431 SLC25A22Q9H936 323 aa15.05■□□□□ -0
SGCB-201ENST00000381431 GAR1Q9NY12 217 aaKnown RBP15.05■□□□□ -0
SGCB-201ENST00000381431 NEUROG3Q9Y4Z2 214 aa15.05■□□□□ -0
SGCB-201ENST00000381431 TRBV5-5A0A0J9YX44 114 aa15.04■□□□□ -0
SGCB-201ENST00000381431 KLK10O43240 276 aa15.04■□□□□ -0
SGCB-201ENST00000381431 LIFP15018 202 aa15.04■□□□□ -0
SGCB-201ENST00000381431 ERHP84090 104 aaKnown RBP15.04■□□□□ -0
SGCB-201ENST00000381431 PHYHD1Q5SRE7 291 aa15.04■□□□□ -0
SGCB-201ENST00000381431 S100A7AQ86SG5 101 aa15.04■□□□□ -0
SGCB-201ENST00000381431 LYG1Q8N1E2 194 aa15.04■□□□□ -0
SGCB-201ENST00000381431 OR13G1Q8NGZ3 307 aa15.04■□□□□ -0
SGCB-201ENST00000381431 SAT2Q96F10 170 aaPredicted RBP15.04■□□□□ -0
SGCB-201ENST00000381431 TAAR6Q96RI8 345 aa15.04■□□□□ -0
SGCB-201ENST00000381431 OR2D2Q9H210 308 aa15.04■□□□□ -0
SGCB-201ENST00000381431 MAP1LC3B2A6NCE7 125 aa15.04■□□□□ -0
SGCB-201ENST00000381431 H3F3AP84243 136 aa15.04■□□□□ -0
SGCB-201ENST00000381431 OR10AD1Q8NGE0 317 aa15.04■□□□□ -0
SGCB-201ENST00000381431 LURAP1Q96LR2 239 aa15.04■□□□□ -0
SGCB-201ENST00000381431 ZNF426Q9BUY5 554 aa15.04■□□□□ -0
SGCB-201ENST00000381431 SF3B5Q9BWJ5 86 aaKnown RBP15.04■□□□□ -0
SGCB-201ENST00000381431 MAP1LC3BQ9GZQ8 125 aa15.04■□□□□ -0
SGCB-201ENST00000381431 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.04■□□□□ -0
SGCB-201ENST00000381431 IGLV1-36A0A0B4J1U3 117 aa15.04■□□□□ -0
SGCB-201ENST00000381431 G3V3Q6 166 aa15.04■□□□□ -0
SGCB-201ENST00000381431 OPN1MWP04001 364 aa15.04■□□□□ -0
SGCB-201ENST00000381431 OPN1MW2P0DN77 364 aa15.04■□□□□ -0
SGCB-201ENST00000381431 OPN1MW3P0DN78 364 aa15.04■□□□□ -0
SGCB-201ENST00000381431 PPP1CBP62140 327 aa15.04■□□□□ -0
SGCB-201ENST00000381431 COL13A1Q5TAT6 717 aaPredicted RBP15.04■□□□□ -0
SGCB-201ENST00000381431 NMES1Q9C002 83 aa15.04■□□□□ -0
SGCB-201ENST00000381431 CTDSP1Q9GZU7 261 aa15.04■□□□□ -0
SGCB-201ENST00000381431 TINAGQ9UJW2 476 aa15.04■□□□□ -0
SGCB-201ENST00000381431 TRGV10A0A0A0MS01 117 aa15.03■□□□□ -0
SGCB-201ENST00000381431 NMBP08949 121 aa15.03■□□□□ -0
SGCB-201ENST00000381431 MPGP29372 298 aa15.03■□□□□ -0
SGCB-201ENST00000381431 GNG10P50151 68 aa15.03■□□□□ -0
SGCB-201ENST00000381431 MNX1P50219 401 aaPredicted RBP15.03■□□□□ -0
SGCB-201ENST00000381431 BOD1Q96IK1 185 aa15.03■□□□□ -0
SGCB-201ENST00000381431 TRGV8A0A0C4DH27 118 aa15.03■□□□□ -0
SGCB-201ENST00000381431 OR5B21A6NL26 309 aa15.03■□□□□ -0
SGCB-201ENST00000381431 F12P00748 615 aaPredicted RBP15.03■□□□□ -0
SGCB-201ENST00000381431 ZNF17P17021 662 aa15.03■□□□□ -0
SGCB-201ENST00000381431 VDAC1P21796 283 aa15.03■□□□□ -0
SGCB-201ENST00000381431 RPS4Y1P22090 263 aaKnown RBP15.03■□□□□ -0
SGCB-201ENST00000381431 EIF3IQ13347 325 aaKnown RBP15.03■□□□□ -0
SGCB-201ENST00000381431 HES3Q5TGS1 186 aa15.03■□□□□ -0
SGCB-201ENST00000381431 BTNL8Q6UX41 500 aa15.03■□□□□ -0
SGCB-201ENST00000381431 DEFB124Q8NES8 71 aa15.03■□□□□ -0
SGCB-201ENST00000381431 M1APQ8TC57 530 aa15.03■□□□□ -0
SGCB-201ENST00000381431 CORO2AQ92828 525 aa15.03■□□□□ -0
SGCB-201ENST00000381431 OR2H1Q9GZK4 316 aa15.03■□□□□ -0
SGCB-201ENST00000381431 ALX4Q9H161 411 aaPredicted RBP15.03■□□□□ -0
SGCB-201ENST00000381431 LPAR3Q9UBY5 353 aa15.03■□□□□ -0
SGCB-201ENST00000381431 TRAF3IP2O43734 574 aaPredicted RBP15.03■□□□□ -0
SGCB-201ENST00000381431 CHRNB4P30926 498 aa15.03■□□□□ -0
SGCB-201ENST00000381431 TAS2R45P59539 299 aa15.03■□□□□ -0
SGCB-201ENST00000381431 RNF212Q495C1 297 aa15.03■□□□□ -0
SGCB-201ENST00000381431 FFAR4Q5NUL3 377 aa15.03■□□□□ -0
SGCB-201ENST00000381431 PPP1R14DQ9NXH3 145 aa15.03■□□□□ -0
SGCB-201ENST00000381431 LIPGQ9Y5X9 500 aa15.03■□□□□ -0
SGCB-201ENST00000381431 ROM1Q03395 351 aa15.03■□□□□ -0
SGCB-201ENST00000381431 RAB33BQ9H082 229 aa15.03■□□□□ -0
SGCB-201ENST00000381431 GPR35Q9HC97 309 aa15.03■□□□□ -0
SGCB-201ENST00000381431 TMEM38BQ9NVV0 291 aa15.03■□□□□ -0
SGCB-201ENST00000381431 STARD10Q9Y365 291 aa15.03■□□□□ -0
SGCB-201ENST00000381431 RRP8O43159 456 aaKnown RBP15.02■□□□□ -0
SGCB-201ENST00000381431 ZNF66Q6ZN08 573 aa15.02■□□□□ -0
SGCB-201ENST00000381431 LRRC29Q8WV35 223 aa15.02■□□□□ -0
SGCB-201ENST00000381431 NOTCH3Q9UM47 2321 aa15.02■□□□□ -0
SGCB-201ENST00000381431 CD1AP06126 327 aa15.02■□□□□ -0
SGCB-201ENST00000381431 OR5B3Q8NH48 314 aa15.02■□□□□ -0
SGCB-201ENST00000381431 LPAR5Q9H1C0 372 aa15.02■□□□□ -0
SGCB-201ENST00000381431 DUSP15Q9H1R2 295 aaPredicted RBP15.02■□□□□ -0
SGCB-201ENST00000381431 ZNF107Q9UII5 783 aaPredicted RBP15.02■□□□□ -0
SGCB-201ENST00000381431 BRCA1P38398 1863 aaKnown RBP15.02□□□□□ -0.01
SGCB-201ENST00000381431 NKX2-6A6NCS4 301 aa15.02□□□□□ -0.01
SGCB-201ENST00000381431 DYNLT3P51808 116 aa15.02□□□□□ -0.01
SGCB-201ENST00000381431 MOB1BQ7L9L4 216 aa15.02□□□□□ -0.01
SGCB-201ENST00000381431 ZDHHC11Q9H8X9 412 aa15.02□□□□□ -0.01
SGCB-201ENST00000381431 TNFSF18Q9UNG2 199 aa15.02□□□□□ -0.01
SGCB-201ENST00000381431 CST2P09228 141 aa15.01□□□□□ -0.01
SGCB-201ENST00000381431 BCL3P20749 454 aa15.01□□□□□ -0.01
SGCB-201ENST00000381431 SOX8P57073 446 aa15.01□□□□□ -0.01
SGCB-201ENST00000381431 DBX2Q6ZNG2 339 aa15.01□□□□□ -0.01
SGCB-201ENST00000381431 ADIPOR1Q96A54 375 aa15.01□□□□□ -0.01
SGCB-201ENST00000381431 RSRP1Q9BUV0 290 aa15.01□□□□□ -0.01
SGCB-201ENST00000381431 SLC7A10Q9NS82 523 aa15.01□□□□□ -0.01
SGCB-201ENST00000381431 MPC1Q9Y5U8 109 aa15.01□□□□□ -0.01
SGCB-201ENST00000381431 GREB1Q4ZG55 1949 aa15.01□□□□□ -0.01
SGCB-201ENST00000381431 PKDREJQ9NTG1 2253 aa15.01□□□□□ -0.01
SGCB-201ENST00000381431 RCC1P18754 421 aaPredicted RBP15.01□□□□□ -0.01
SGCB-201ENST00000381431 HIKESHIQ53FT3 197 aa15.01□□□□□ -0.01
SGCB-201ENST00000381431 AWAT1Q58HT5 328 aa15.01□□□□□ -0.01
SGCB-201ENST00000381431 OR2A2Q6IF42 318 aa15.01□□□□□ -0.01
SGCB-201ENST00000381431 OR10D4PQ8NGN7 298 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms