RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 RNF167Q9H6Y7 350 aa13.32□□□□□ -0.28
SNRPB-201ENST00000381342 MXRA5Q9NR99 2828 aa13.31□□□□□ -0.28
SNRPB-201ENST00000381342 TRBV23-1A0A0A0MS06 115 aa13.31□□□□□ -0.28
SNRPB-201ENST00000381342 A0A0G2JK05 382 aa13.31□□□□□ -0.28
SNRPB-201ENST00000381342 SLC17A2O00624 439 aa13.31□□□□□ -0.28
SNRPB-201ENST00000381342 PDCD5O14737 125 aa13.31□□□□□ -0.28
SNRPB-201ENST00000381342 GEMIN2O14893 280 aaKnown RBP13.31□□□□□ -0.28
SNRPB-201ENST00000381342 DEGS1O15121 323 aa13.31□□□□□ -0.28
SNRPB-201ENST00000381342 OR7C1O76099 320 aaPredicted RBP13.31□□□□□ -0.28
SNRPB-201ENST00000381342 CD37P11049 281 aa13.31□□□□□ -0.28
SNRPB-201ENST00000381342 MGMTP16455 207 aa13.31□□□□□ -0.28
SNRPB-201ENST00000381342 ARF6P62330 175 aa13.31□□□□□ -0.28
SNRPB-201ENST00000381342 RPL31P62899 125 aaKnown RBP13.31□□□□□ -0.28
SNRPB-201ENST00000381342 GPR176Q14439 515 aa13.31□□□□□ -0.28
SNRPB-201ENST00000381342 ATXN7L3Q14CW9 347 aaPredicted RBP13.31□□□□□ -0.28
SNRPB-201ENST00000381342 RAB11BQ15907 218 aa13.31□□□□□ -0.28
SNRPB-201ENST00000381342 HES5Q5TA89 166 aa13.31□□□□□ -0.28
SNRPB-201ENST00000381342 METTL11BQ5VVY1 283 aa13.31□□□□□ -0.28
SNRPB-201ENST00000381342 OR10K2Q6IF99 312 aa13.31□□□□□ -0.28
SNRPB-201ENST00000381342 BPIFB2Q8N4F0 458 aa13.31□□□□□ -0.28
SNRPB-201ENST00000381342 TPRX1Q8N7U7 411 aa13.31□□□□□ -0.28
SNRPB-201ENST00000381342 CHST4Q8NCG5 386 aa13.31□□□□□ -0.28
SNRPB-201ENST00000381342 PCGF1Q9BSM1 259 aa13.31□□□□□ -0.28
SNRPB-201ENST00000381342 SUCNR1Q9BXA5 334 aa13.31□□□□□ -0.28
SNRPB-201ENST00000381342 SIRPDQ9H106 197 aa13.31□□□□□ -0.28
SNRPB-201ENST00000381342 PCDHB16Q9NRJ7 776 aa13.31□□□□□ -0.28
SNRPB-201ENST00000381342 V9GY05 133 aa13.31□□□□□ -0.28
SNRPB-201ENST00000381342 TRAV24A0A0B4J272 114 aa13.3□□□□□ -0.28
SNRPB-201ENST00000381342 TRAV40A0A0B4J280 105 aa13.3□□□□□ -0.28
SNRPB-201ENST00000381342 MGST3O14880 152 aa13.3□□□□□ -0.28
SNRPB-201ENST00000381342 TOX4O94842 621 aa13.3□□□□□ -0.28
SNRPB-201ENST00000381342 MPIG6BO95866 241 aa13.3□□□□□ -0.28
SNRPB-201ENST00000381342 FSHBP01225 129 aa13.3□□□□□ -0.28
SNRPB-201ENST00000381342 UBBP0CG47 229 aa13.3□□□□□ -0.28
SNRPB-201ENST00000381342 VSIG8P0DPA2 414 aa13.3□□□□□ -0.28
SNRPB-201ENST00000381342 MMP9P14780 707 aa13.3□□□□□ -0.28
SNRPB-201ENST00000381342 RAB3BP20337 219 aa13.3□□□□□ -0.28
SNRPB-201ENST00000381342 LMO1P25800 156 aa13.3□□□□□ -0.28
SNRPB-201ENST00000381342 CLDN12P56749 244 aa13.3□□□□□ -0.28
SNRPB-201ENST00000381342 SRSF2Q01130 221 aaKnown RBP13.3□□□□□ -0.28
SNRPB-201ENST00000381342 BLMHQ13867 455 aa13.3□□□□□ -0.28
SNRPB-201ENST00000381342 ZNF273Q14593 569 aa13.3□□□□□ -0.28
SNRPB-201ENST00000381342 PAN3Q58A45 887 aaKnown RBP13.3□□□□□ -0.28
SNRPB-201ENST00000381342 KLF17Q5JT82 389 aaPredicted RBP13.3□□□□□ -0.28
SNRPB-201ENST00000381342 RBMS3Q6XE24 437 aaKnown RBP13.3□□□□□ -0.28
SNRPB-201ENST00000381342 NR2C2APQ86WQ0 139 aa13.3□□□□□ -0.28
SNRPB-201ENST00000381342 KIR3DL3Q8N743 410 aa13.3□□□□□ -0.28
SNRPB-201ENST00000381342 SLC25A28Q96A46 364 aa13.3□□□□□ -0.28
SNRPB-201ENST00000381342 WDFY2Q96P53 400 aa13.3□□□□□ -0.28
SNRPB-201ENST00000381342 TBX15Q96SF7 602 aa13.3□□□□□ -0.28
SNRPB-201ENST00000381342 CENPOQ9BU64 300 aa13.3□□□□□ -0.28
SNRPB-201ENST00000381342 SELENOIQ9C0D9 397 aa13.3□□□□□ -0.28
SNRPB-201ENST00000381342 ING3Q9NXR8 418 aa13.3□□□□□ -0.28
SNRPB-201ENST00000381342 GHRLQ9UBU3 117 aa13.3□□□□□ -0.28
SNRPB-201ENST00000381342 ATRQ13535 2644 aa13.3□□□□□ -0.28
SNRPB-201ENST00000381342 IGHV3OR16-10A0A075B7F0 116 aa13.29□□□□□ -0.28
SNRPB-201ENST00000381342 TRIM77I1YAP6 450 aa13.29□□□□□ -0.28
SNRPB-201ENST00000381342 BPNT1O95861 308 aa13.29□□□□□ -0.28
SNRPB-201ENST00000381342 CCL3L1P16619 93 aa13.29□□□□□ -0.28
SNRPB-201ENST00000381342 TGFBR1P36897 503 aa13.29□□□□□ -0.28
SNRPB-201ENST00000381342 DLX1P56177 255 aa13.29□□□□□ -0.28
SNRPB-201ENST00000381342 PRB3Q04118 309 aaPredicted RBP13.29□□□□□ -0.28
SNRPB-201ENST00000381342 UNC119Q13432 240 aa13.29□□□□□ -0.28
SNRPB-201ENST00000381342 TAF9Q16594 264 aa13.29□□□□□ -0.28
SNRPB-201ENST00000381342 MPV17LQ2QL34 196 aa13.29□□□□□ -0.28
SNRPB-201ENST00000381342 TMEM200BQ69YZ2 307 aa13.29□□□□□ -0.28
SNRPB-201ENST00000381342 TCF23Q7RTU1 214 aa13.29□□□□□ -0.28
SNRPB-201ENST00000381342 VMO1Q7Z5L0 202 aa13.29□□□□□ -0.28
SNRPB-201ENST00000381342 LINC00596Q86U02 117 aa13.29□□□□□ -0.28
SNRPB-201ENST00000381342 OR5D13Q8NGL4 314 aa13.29□□□□□ -0.28
SNRPB-201ENST00000381342 PPP1R35Q8TAP8 253 aa13.29□□□□□ -0.28
SNRPB-201ENST00000381342 UPRTQ96BW1 309 aa13.29□□□□□ -0.28
SNRPB-201ENST00000381342 COQ2Q96H96 371 aa13.29□□□□□ -0.28
SNRPB-201ENST00000381342 Q96M66 194 aa13.29□□□□□ -0.28
SNRPB-201ENST00000381342 KCTD7Q96MP8 289 aa13.29□□□□□ -0.28
SNRPB-201ENST00000381342 CST11Q9H112 138 aa13.29□□□□□ -0.28
SNRPB-201ENST00000381342 KPTNQ9Y664 436 aa13.29□□□□□ -0.28
SNRPB-201ENST00000381342 CUBNO60494 3623 aa13.29□□□□□ -0.28
SNRPB-201ENST00000381342 IGHV4-38-2P0DP08 117 aa13.28□□□□□ -0.28
SNRPB-201ENST00000381342 P2RX3P56373 397 aa13.28□□□□□ -0.28
SNRPB-201ENST00000381342 QRFPP83859 136 aa13.28□□□□□ -0.28
SNRPB-201ENST00000381342 AESQ08117 197 aa13.28□□□□□ -0.28
SNRPB-201ENST00000381342 TIMM50Q3ZCQ8 353 aa13.28□□□□□ -0.28
SNRPB-201ENST00000381342 ATAD3CQ5T2N8 411 aa13.28□□□□□ -0.28
SNRPB-201ENST00000381342 USP43Q70EL4 1123 aa13.28□□□□□ -0.28
SNRPB-201ENST00000381342 CMTM4Q8IZR5 234 aa13.28□□□□□ -0.28
SNRPB-201ENST00000381342 Q8N7P7 452 aa13.28□□□□□ -0.28
SNRPB-201ENST00000381342 SUMF2Q8NBJ7 301 aa13.28□□□□□ -0.28
SNRPB-201ENST00000381342 OR13F1Q8NGS4 319 aa13.28□□□□□ -0.28
SNRPB-201ENST00000381342 ZFAND2BQ8WV99 257 aa13.28□□□□□ -0.28
SNRPB-201ENST00000381342 MRPS24Q96EL2 167 aaKnown RBP13.28□□□□□ -0.28
SNRPB-201ENST00000381342 CYYR1Q96J86 154 aa13.28□□□□□ -0.28
SNRPB-201ENST00000381342 DPCDQ9BVM2 203 aaPredicted RBP13.28□□□□□ -0.28
SNRPB-201ENST00000381342 TMEM59Q9BXS4 323 aa13.28□□□□□ -0.28
SNRPB-201ENST00000381342 IFT22Q9H7X7 185 aa13.28□□□□□ -0.28
SNRPB-201ENST00000381342 SIRT7Q9NRC8 400 aa13.28□□□□□ -0.28
SNRPB-201ENST00000381342 STEAP1Q9UHE8 339 aa13.28□□□□□ -0.28
SNRPB-201ENST00000381342 A0A0B4J203 849 aa13.27□□□□□ -0.29
SNRPB-201ENST00000381342 IFITM5A6NNB3 132 aa13.27□□□□□ -0.29
SNRPB-201ENST00000381342 TMEM14DPA8MWL7 114 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms