RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 SNRPBP14678 240 aaKnown RBP4.35□□□□□ -1.71
PTPRD-203ENST00000381196 SLC36A2Q495M3 483 aa4.35□□□□□ -1.71
PTPRD-203ENST00000381196 OR9G4Q8NGQ1 327 aa4.35□□□□□ -1.71
PTPRD-203ENST00000381196 OR2V1Q8NHB1 315 aa4.35□□□□□ -1.71
PTPRD-203ENST00000381196 PDFQ9HBH1 243 aa4.35□□□□□ -1.71
PTPRD-203ENST00000381196 ASCL3Q9NQ33 180 aa4.35□□□□□ -1.71
PTPRD-203ENST00000381196 NCKAP5O14513 1909 aa4.35□□□□□ -1.71
PTPRD-203ENST00000381196 DCTN6O00399 190 aa4.35□□□□□ -1.71
PTPRD-203ENST00000381196 SPNP16150 400 aa4.35□□□□□ -1.71
PTPRD-203ENST00000381196 ENPP1P22413 925 aa4.35□□□□□ -1.71
PTPRD-203ENST00000381196 PPICP45877 212 aa4.35□□□□□ -1.71
PTPRD-203ENST00000381196 ACKR1Q16570 336 aa4.35□□□□□ -1.71
PTPRD-203ENST00000381196 SAMD13Q5VXD3 122 aa4.35□□□□□ -1.71
PTPRD-203ENST00000381196 ROBO4Q8WZ75 1007 aa4.35□□□□□ -1.71
PTPRD-203ENST00000381196 MARS2Q96GW9 593 aaKnown RBP4.35□□□□□ -1.71
PTPRD-203ENST00000381196 OR2V2Q96R30 315 aa4.35□□□□□ -1.71
PTPRD-203ENST00000381196 WASHC3Q9Y3C0 194 aa4.35□□□□□ -1.71
PTPRD-203ENST00000381196 LYL1P12980 280 aa4.35□□□□□ -1.71
PTPRD-203ENST00000381196 RND3P61587 244 aa4.35□□□□□ -1.71
PTPRD-203ENST00000381196 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.35□□□□□ -1.71
PTPRD-203ENST00000381196 ZNF770Q6IQ21 691 aaPredicted RBP4.35□□□□□ -1.71
PTPRD-203ENST00000381196 SCD5Q86SK9 330 aa4.35□□□□□ -1.71
PTPRD-203ENST00000381196 BPIFA4PQ86YQ2 179 aa4.35□□□□□ -1.71
PTPRD-203ENST00000381196 OR1N2Q8NGR9 330 aa4.35□□□□□ -1.71
PTPRD-203ENST00000381196 C20orf144Q9BQM9 153 aa4.35□□□□□ -1.71
PTPRD-203ENST00000381196 MAP1LC3CQ9BXW4 147 aa4.35□□□□□ -1.71
PTPRD-203ENST00000381196 A0A1W2PQD3 144 aa4.35□□□□□ -1.71
PTPRD-203ENST00000381196 GHRHP01286 108 aa4.35□□□□□ -1.71
PTPRD-203ENST00000381196 FXYD4P59646 89 aa4.35□□□□□ -1.71
PTPRD-203ENST00000381196 GAMTQ14353 236 aa4.35□□□□□ -1.71
PTPRD-203ENST00000381196 ANKRD55Q3KP44 614 aa4.35□□□□□ -1.71
PTPRD-203ENST00000381196 C1orf100Q5SVJ3 147 aa4.35□□□□□ -1.71
PTPRD-203ENST00000381196 LIPNQ5VXI9 398 aa4.35□□□□□ -1.71
PTPRD-203ENST00000381196 ATP5L2Q7Z4Y8 100 aa4.35□□□□□ -1.71
PTPRD-203ENST00000381196 H1FXQ92522 213 aaKnown RBP4.35□□□□□ -1.71
PTPRD-203ENST00000381196 APIPQ96GX9 242 aa4.35□□□□□ -1.71
PTPRD-203ENST00000381196 GNG12Q9UBI6 72 aa4.35□□□□□ -1.71
PTPRD-203ENST00000381196 OR14J1Q9UGF5 321 aa4.35□□□□□ -1.71
PTPRD-203ENST00000381196 SMPXQ9UHP9 88 aa4.35□□□□□ -1.71
PTPRD-203ENST00000381196 FANCMQ8IYD8 2048 aa4.35□□□□□ -1.71
PTPRD-203ENST00000381196 PRAMEF27A3QJZ7 478 aa4.34□□□□□ -1.71
PTPRD-203ENST00000381196 PRAMEF25A6NGN4 478 aa4.34□□□□□ -1.71
PTPRD-203ENST00000381196 PRAMEF4O60810 478 aa4.34□□□□□ -1.71
PTPRD-203ENST00000381196 C1SP09871 688 aa4.34□□□□□ -1.71
PTPRD-203ENST00000381196 PRDX1Q06830 199 aaKnown RBP4.34□□□□□ -1.71
PTPRD-203ENST00000381196 ZNF718Q3SXZ3 478 aa4.34□□□□□ -1.71
PTPRD-203ENST00000381196 CCSMST1Q4G0I0 132 aa4.34□□□□□ -1.71
PTPRD-203ENST00000381196 PRAMEF9Q5VWM5 478 aa4.34□□□□□ -1.71
PTPRD-203ENST00000381196 C5orf17Q8NAS9 161 aa4.34□□□□□ -1.71
PTPRD-203ENST00000381196 DMBX1Q8NFW5 382 aa4.34□□□□□ -1.71
PTPRD-203ENST00000381196 OR10J5Q8NHC4 309 aa4.34□□□□□ -1.71
PTPRD-203ENST00000381196 C11orf40Q8WZ69 217 aa4.34□□□□□ -1.71
PTPRD-203ENST00000381196 LSM10Q969L4 123 aaKnown RBP4.34□□□□□ -1.71
PTPRD-203ENST00000381196 SLC25A2Q9BXI2 301 aa4.34□□□□□ -1.71
PTPRD-203ENST00000381196 MS4A6AQ9H2W1 248 aa4.34□□□□□ -1.71
PTPRD-203ENST00000381196 COLQQ9Y215 455 aaPredicted RBP4.34□□□□□ -1.71
PTPRD-203ENST00000381196 DENND4CQ5VZ89 1909 aa4.34□□□□□ -1.71
PTPRD-203ENST00000381196 TNFSF14O43557 240 aa4.34□□□□□ -1.71
PTPRD-203ENST00000381196 GZMMP51124 257 aa4.34□□□□□ -1.71
PTPRD-203ENST00000381196 CARD18P57730 90 aa4.34□□□□□ -1.71
PTPRD-203ENST00000381196 NUTF2P61970 127 aaKnown RBP4.34□□□□□ -1.71
PTPRD-203ENST00000381196 TFF2Q03403 129 aa4.34□□□□□ -1.71
PTPRD-203ENST00000381196 TCF23Q7RTU1 214 aa4.34□□□□□ -1.71
PTPRD-203ENST00000381196 ETFBKMTQ8IXQ9 262 aa4.34□□□□□ -1.71
PTPRD-203ENST00000381196 ZNF845Q96IR2 970 aaPredicted RBP4.34□□□□□ -1.71
PTPRD-203ENST00000381196 RAB33BQ9H082 229 aa4.34□□□□□ -1.71
PTPRD-203ENST00000381196 CNIH4Q9P003 139 aa4.34□□□□□ -1.71
PTPRD-203ENST00000381196 NUP210Q8TEM1 1887 aaPredicted RBP4.34□□□□□ -1.71
PTPRD-203ENST00000381196 RAMP1O60894 148 aa4.34□□□□□ -1.71
PTPRD-203ENST00000381196 TRGC2P03986 189 aa4.34□□□□□ -1.71
PTPRD-203ENST00000381196 JOSD1Q15040 202 aaPredicted RBP4.34□□□□□ -1.71
PTPRD-203ENST00000381196 MEX3BQ6ZN04 569 aaKnown RBP4.34□□□□□ -1.71
PTPRD-203ENST00000381196 ZNF66Q6ZN08 573 aa4.34□□□□□ -1.71
PTPRD-203ENST00000381196 SIRT6Q8N6T7 355 aa4.34□□□□□ -1.71
PTPRD-203ENST00000381196 LRTM2Q8N967 370 aa4.34□□□□□ -1.71
PTPRD-203ENST00000381196 GRAMD2BQ96HH9 432 aa4.34□□□□□ -1.71
PTPRD-203ENST00000381196 INSM2Q96T92 566 aaPredicted RBP4.34□□□□□ -1.71
PTPRD-203ENST00000381196 TTTY10Q9BZA0 68 aa4.34□□□□□ -1.71
PTPRD-203ENST00000381196 LOC107986453A0A1B0GWG9 222 aa4.34□□□□□ -1.71
PTPRD-203ENST00000381196 H0YIG0 161 aa4.34□□□□□ -1.71
PTPRD-203ENST00000381196 AQP7O14520 342 aa4.34□□□□□ -1.71
PTPRD-203ENST00000381196 ZNF25P17030 456 aaPredicted RBP4.34□□□□□ -1.71
PTPRD-203ENST00000381196 NPY1RP25929 384 aa4.34□□□□□ -1.71
PTPRD-203ENST00000381196 HTR1DP28221 377 aa4.34□□□□□ -1.71
PTPRD-203ENST00000381196 CD1BP29016 333 aa4.34□□□□□ -1.71
PTPRD-203ENST00000381196 PITX1P78337 314 aaPredicted RBP4.34□□□□□ -1.71
PTPRD-203ENST00000381196 EFNB1P98172 346 aa4.34□□□□□ -1.71
PTPRD-203ENST00000381196 PIN1Q13526 163 aaPredicted RBP4.34□□□□□ -1.71
PTPRD-203ENST00000381196 PLCXD3Q63HM9 321 aa4.34□□□□□ -1.71
PTPRD-203ENST00000381196 Q6ZN92 141 aa4.34□□□□□ -1.71
PTPRD-203ENST00000381196 ZNF383Q8NA42 475 aa4.34□□□□□ -1.71
PTPRD-203ENST00000381196 OR10AG1Q8NH19 301 aa4.34□□□□□ -1.71
PTPRD-203ENST00000381196 LIPHQ8WWY8 451 aa4.34□□□□□ -1.71
PTPRD-203ENST00000381196 RGP1Q92546 391 aaPredicted RBP4.34□□□□□ -1.71
PTPRD-203ENST00000381196 PERPQ96FX8 193 aa4.34□□□□□ -1.71
PTPRD-203ENST00000381196 TSPAN32Q96QS1 320 aa4.34□□□□□ -1.71
PTPRD-203ENST00000381196 SSBP4Q9BWG4 385 aaPredicted RBP4.34□□□□□ -1.71
PTPRD-203ENST00000381196 ELOVL3Q9HB03 270 aa4.34□□□□□ -1.71
PTPRD-203ENST00000381196 SLC23A2Q9UGH3 650 aa4.34□□□□□ -1.71
PTPRD-203ENST00000381196 AMDHD2Q9Y303 409 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms