RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 CABLES2Q9BTV7 478 aa9.94□□□□□ -0.82
SMAD9-202ENST00000379826 MYOZ1Q9NP98 299 aaPredicted RBP9.94□□□□□ -0.82
SMAD9-202ENST00000379826 UBE2L5PA0A1B0GUS4 154 aa9.94□□□□□ -0.82
SMAD9-202ENST00000379826 SERPINA7P05543 415 aa9.94□□□□□ -0.82
SMAD9-202ENST00000379826 HBG1P69891 147 aa9.94□□□□□ -0.82
SMAD9-202ENST00000379826 HBG2P69892 147 aa9.94□□□□□ -0.82
SMAD9-202ENST00000379826 OR4F5Q8NH21 305 aa9.94□□□□□ -0.82
SMAD9-202ENST00000379826 OR4F4Q96R69 305 aa9.94□□□□□ -0.82
SMAD9-202ENST00000379826 TMEM8BA6NDV4 472 aa9.93□□□□□ -0.82
SMAD9-202ENST00000379826 AQP7P3A6NL99 342 aa9.93□□□□□ -0.82
SMAD9-202ENST00000379826 LINC00587B1AMM8 73 aa9.93□□□□□ -0.82
SMAD9-202ENST00000379826 BCL3P20749 454 aa9.93□□□□□ -0.82
SMAD9-202ENST00000379826 CD200P41217 278 aa9.93□□□□□ -0.82
SMAD9-202ENST00000379826 TRA2AQ13595 282 aaKnown RBP eCLIP9.93□□□□□ -0.82
SMAD9-202ENST00000379826 RAB35Q15286 201 aa9.93□□□□□ -0.82
SMAD9-202ENST00000379826 RPS19BP1Q86WX3 136 aaKnown RBP9.93□□□□□ -0.82
SMAD9-202ENST00000379826 D2HGDHQ8N465 521 aa9.93□□□□□ -0.82
SMAD9-202ENST00000379826 ZNF808Q8N4W9 903 aaPredicted RBP9.93□□□□□ -0.82
SMAD9-202ENST00000379826 ADPRHL1Q8NDY3 354 aa9.93□□□□□ -0.82
SMAD9-202ENST00000379826 RHOVQ96L33 236 aa9.93□□□□□ -0.82
SMAD9-202ENST00000379826 TMED3Q9Y3Q3 217 aa9.93□□□□□ -0.82
SMAD9-202ENST00000379826 A0A1W2PR80 420 aa9.93□□□□□ -0.82
SMAD9-202ENST00000379826 ZNF732B4DXR9 585 aa9.93□□□□□ -0.82
SMAD9-202ENST00000379826 ZNF814B7Z6K7 855 aa9.93□□□□□ -0.82
SMAD9-202ENST00000379826 BMP5P22003 454 aa9.93□□□□□ -0.82
SMAD9-202ENST00000379826 UBE2V2Q15819 145 aa9.93□□□□□ -0.82
SMAD9-202ENST00000379826 CHST5Q9GZS9 411 aa9.93□□□□□ -0.82
SMAD9-202ENST00000379826 STARD10Q9Y365 291 aa9.93□□□□□ -0.82
SMAD9-202ENST00000379826 DEGS1O15121 323 aa9.93□□□□□ -0.82
SMAD9-202ENST00000379826 WDR1O75083 606 aa9.93□□□□□ -0.82
SMAD9-202ENST00000379826 FUT3P21217 361 aa9.93□□□□□ -0.82
SMAD9-202ENST00000379826 CDCP2Q5VXM1 449 aa9.93□□□□□ -0.82
SMAD9-202ENST00000379826 RASL10BQ96S79 203 aa9.93□□□□□ -0.82
SMAD9-202ENST00000379826 HINT2Q9BX68 163 aa9.93□□□□□ -0.82
SMAD9-202ENST00000379826 CRYM-AS1A6NIL9 109 aa9.93□□□□□ -0.82
SMAD9-202ENST00000379826 MPPED1O15442 326 aa9.93□□□□□ -0.82
SMAD9-202ENST00000379826 VAMP5O95183 116 aa9.93□□□□□ -0.82
SMAD9-202ENST00000379826 FCGR3AP08637 254 aa9.93□□□□□ -0.82
SMAD9-202ENST00000379826 TNFSF4P23510 183 aa9.93□□□□□ -0.82
SMAD9-202ENST00000379826 TMEM50BP56557 158 aa9.93□□□□□ -0.82
SMAD9-202ENST00000379826 MPV17LQ2QL34 196 aa9.93□□□□□ -0.82
SMAD9-202ENST00000379826 SPATA46Q5T0L3 261 aa9.93□□□□□ -0.82
SMAD9-202ENST00000379826 GAPTQ8N292 157 aa9.93□□□□□ -0.82
SMAD9-202ENST00000379826 OR2M3Q8NG83 312 aa9.93□□□□□ -0.82
SMAD9-202ENST00000379826 ABHD5Q8WTS1 349 aa9.93□□□□□ -0.82
SMAD9-202ENST00000379826 SPSB1Q96BD6 273 aa9.93□□□□□ -0.82
SMAD9-202ENST00000379826 FOXB1Q99853 325 aa9.93□□□□□ -0.82
SMAD9-202ENST00000379826 ARID1AO14497 2285 aa9.93□□□□□ -0.82
SMAD9-202ENST00000379826 TGIF2-C20orf24A0A0A6YYL0 155 aa9.93□□□□□ -0.82
SMAD9-202ENST00000379826 FAM166BA8MTA8 275 aa9.93□□□□□ -0.82
SMAD9-202ENST00000379826 MASP2O00187 686 aa9.93□□□□□ -0.82
SMAD9-202ENST00000379826 CHRNB4P30926 498 aa9.93□□□□□ -0.82
SMAD9-202ENST00000379826 RAB4BP61018 213 aa9.93□□□□□ -0.82
SMAD9-202ENST00000379826 RAB39BQ96DA2 213 aa9.93□□□□□ -0.82
SMAD9-202ENST00000379826 CYTL1Q9NRR1 136 aa9.93□□□□□ -0.82
SMAD9-202ENST00000379826 RNF150Q9ULK6 438 aa9.93□□□□□ -0.82
SMAD9-202ENST00000379826 CACNA1IQ9P0X4 2223 aa9.92□□□□□ -0.82
SMAD9-202ENST00000379826 TRAV17A0A0B4J275 112 aa9.92□□□□□ -0.82
SMAD9-202ENST00000379826 PHOX2AO14813 284 aa9.92□□□□□ -0.82
SMAD9-202ENST00000379826 CLN5O75503 358 aa9.92□□□□□ -0.82
SMAD9-202ENST00000379826 ATP6V0CP27449 155 aa9.92□□□□□ -0.82
SMAD9-202ENST00000379826 DSCR4P56555 118 aaPredicted RBP9.92□□□□□ -0.82
SMAD9-202ENST00000379826 SLC39A7Q92504 469 aa9.92□□□□□ -0.82
SMAD9-202ENST00000379826 CACFD1Q9UGQ2 172 aa9.92□□□□□ -0.82
SMAD9-202ENST00000379826 PQLC2LA1A4F0 135 aa9.92□□□□□ -0.82
SMAD9-202ENST00000379826 MEX3AA1L020 520 aaKnown RBP9.92□□□□□ -0.82
SMAD9-202ENST00000379826 CYTIPO60759 359 aa9.92□□□□□ -0.82
SMAD9-202ENST00000379826 ARF1P84077 181 aaKnown RBP9.92□□□□□ -0.82
SMAD9-202ENST00000379826 TGFBR3Q03167 851 aa9.92□□□□□ -0.82
SMAD9-202ENST00000379826 SARAFQ96BY9 339 aa9.92□□□□□ -0.82
SMAD9-202ENST00000379826 SMIM7Q9BQ49 75 aa9.92□□□□□ -0.82
SMAD9-202ENST00000379826 CDH20Q9HBT6 801 aa9.92□□□□□ -0.82
SMAD9-202ENST00000379826 FGF16O43320 207 aa9.92□□□□□ -0.82
SMAD9-202ENST00000379826 CHST1O43916 411 aa9.92□□□□□ -0.82
SMAD9-202ENST00000379826 PSMB3P49720 205 aa9.92□□□□□ -0.82
SMAD9-202ENST00000379826 CLDN15P56746 228 aa9.92□□□□□ -0.82
SMAD9-202ENST00000379826 NXPH1P58417 271 aa9.92□□□□□ -0.82
SMAD9-202ENST00000379826 NTNG2Q96CW9 530 aa9.92□□□□□ -0.82
SMAD9-202ENST00000379826 DEFB127Q9H1M4 99 aa9.92□□□□□ -0.82
SMAD9-202ENST00000379826 ENY2Q9NPA8 101 aa9.92□□□□□ -0.82
SMAD9-202ENST00000379826 OSGIN2Q9Y236 505 aa9.92□□□□□ -0.82
SMAD9-202ENST00000379826 LRRK1Q38SD2 2015 aa9.92□□□□□ -0.82
SMAD9-202ENST00000379826 DOCK9Q9BZ29 2069 aa9.92□□□□□ -0.82
SMAD9-202ENST00000379826 FAM3AP98173 230 aa9.92□□□□□ -0.82
SMAD9-202ENST00000379826 WIPI1Q5MNZ9 446 aaPredicted RBP9.92□□□□□ -0.82
SMAD9-202ENST00000379826 GSN-AS1Q9NRJ2 163 aa9.92□□□□□ -0.82
SMAD9-202ENST00000379826 ALPK2Q86TB3 2170 aa9.92□□□□□ -0.82
SMAD9-202ENST00000379826 F8VVB4 439 aa9.91□□□□□ -0.82
SMAD9-202ENST00000379826 F8VWA3 439 aa9.91□□□□□ -0.82
SMAD9-202ENST00000379826 GRPP07492 148 aa9.91□□□□□ -0.82
SMAD9-202ENST00000379826 PMP22Q01453 160 aa9.91□□□□□ -0.82
SMAD9-202ENST00000379826 HABP2Q14520 560 aaPredicted RBP9.91□□□□□ -0.82
SMAD9-202ENST00000379826 OR56B2PQ8NGI1 322 aa9.91□□□□□ -0.82
SMAD9-202ENST00000379826 LAMP3Q9UQV4 416 aa9.91□□□□□ -0.82
SMAD9-202ENST00000379826 KLF13Q9Y2Y9 288 aaPredicted RBP9.91□□□□□ -0.82
SMAD9-202ENST00000379826 KIR2DS1A0A191URI9 304 aa9.91□□□□□ -0.82
SMAD9-202ENST00000379826 OR6C6A6NF89 314 aa9.91□□□□□ -0.82
SMAD9-202ENST00000379826 PRR19A6NJB7 356 aa9.91□□□□□ -0.82
SMAD9-202ENST00000379826 TRDCB7Z8K6 153 aa9.91□□□□□ -0.82
SMAD9-202ENST00000379826 SEC11BP0C7V7 166 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms