RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 NOVP48745 357 aa12.46□□□□□ -0.41
TRIM13-202ENST00000378182 LGALSLQ3ZCW2 172 aaPredicted RBP12.46□□□□□ -0.41
TRIM13-202ENST00000378182 C19orf54Q5BKX5 351 aa12.46□□□□□ -0.41
TRIM13-202ENST00000378182 FAM26EQ8N5C1 309 aa12.46□□□□□ -0.41
TRIM13-202ENST00000378182 TMEM37Q8WXS4 190 aa12.46□□□□□ -0.41
TRIM13-202ENST00000378182 SULT1A2P50226 295 aa12.46□□□□□ -0.41
TRIM13-202ENST00000378182 AMMECR1LQ6DCA0 310 aa12.46□□□□□ -0.41
TRIM13-202ENST00000378182 MS4A10Q96PG2 267 aa12.46□□□□□ -0.41
TRIM13-202ENST00000378182 DUX5Q96PT3 197 aa12.46□□□□□ -0.41
TRIM13-202ENST00000378182 NKX2-8O15522 239 aa12.46□□□□□ -0.41
TRIM13-202ENST00000378182 KIR2DL1P43626 348 aaPredicted RBP12.46□□□□□ -0.41
TRIM13-202ENST00000378182 KIR2DL2P43627 348 aaPredicted RBP12.46□□□□□ -0.41
TRIM13-202ENST00000378182 COL10A1Q03692 680 aa12.46□□□□□ -0.41
TRIM13-202ENST00000378182 FAM210BQ96KR6 192 aa12.46□□□□□ -0.41
TRIM13-202ENST00000378182 PDCD11Q14690 1871 aaKnown RBP12.46□□□□□ -0.42
TRIM13-202ENST00000378182 PYCARD-AS1I3L0S3 204 aa12.46□□□□□ -0.42
TRIM13-202ENST00000378182 ZBTB37Q5TC79 503 aa12.46□□□□□ -0.42
TRIM13-202ENST00000378182 TSPO2Q5TGU0 170 aa12.46□□□□□ -0.42
TRIM13-202ENST00000378182 RASL10BQ96S79 203 aa12.46□□□□□ -0.42
TRIM13-202ENST00000378182 SS18L1O75177 396 aaPredicted RBP12.46□□□□□ -0.42
TRIM13-202ENST00000378182 PNPP00491 289 aa12.46□□□□□ -0.42
TRIM13-202ENST00000378182 LALBAP00709 142 aa12.46□□□□□ -0.42
TRIM13-202ENST00000378182 TMEM229BQ8NBD8 167 aa12.46□□□□□ -0.42
TRIM13-202ENST00000378182 MAP6Q96JE9 813 aa12.46□□□□□ -0.42
TRIM13-202ENST00000378182 GUCD1Q96NT3 240 aa12.46□□□□□ -0.42
TRIM13-202ENST00000378182 PCED1AQ9H1Q7 454 aa12.46□□□□□ -0.42
TRIM13-202ENST00000378182 SLC45A2Q9UMX9 530 aa12.46□□□□□ -0.42
TRIM13-202ENST00000378182 UNC13CQ8NB66 2214 aa12.45□□□□□ -0.42
TRIM13-202ENST00000378182 M0R3E3 92 aa12.45□□□□□ -0.42
TRIM13-202ENST00000378182 SMPD2O60906 423 aa12.45□□□□□ -0.42
TRIM13-202ENST00000378182 TJP1Q07157 1748 aa12.45□□□□□ -0.42
TRIM13-202ENST00000378182 CMPK2Q5EBM0 449 aa12.45□□□□□ -0.42
TRIM13-202ENST00000378182 NUFIP2Q7Z417 695 aaKnown RBP12.45□□□□□ -0.42
TRIM13-202ENST00000378182 OR8B12Q8NGG6 310 aa12.45□□□□□ -0.42
TRIM13-202ENST00000378182 ASB10Q8WXI3 467 aa12.45□□□□□ -0.42
TRIM13-202ENST00000378182 UCN2Q96RP3 112 aa12.45□□□□□ -0.42
TRIM13-202ENST00000378182 C21orf140B9A014 251 aa12.45□□□□□ -0.42
TRIM13-202ENST00000378182 ERVS71-1P61550 626 aa12.45□□□□□ -0.42
TRIM13-202ENST00000378182 OR4P4Q8NGL7 312 aa12.45□□□□□ -0.42
TRIM13-202ENST00000378182 DYRK2Q92630 601 aa12.45□□□□□ -0.42
TRIM13-202ENST00000378182 PACRGQ96M98 296 aaPredicted RBP12.45□□□□□ -0.42
TRIM13-202ENST00000378182 MIEN1Q9BRT3 115 aa12.45□□□□□ -0.42
TRIM13-202ENST00000378182 CNTD2Q9H8S5 307 aa12.45□□□□□ -0.42
TRIM13-202ENST00000378182 GLRX2Q9NS18 164 aa12.45□□□□□ -0.42
TRIM13-202ENST00000378182 PHOX2AO14813 284 aa12.45□□□□□ -0.42
TRIM13-202ENST00000378182 CIDEAO60543 219 aa12.45□□□□□ -0.42
TRIM13-202ENST00000378182 GABRB1P18505 474 aa12.45□□□□□ -0.42
TRIM13-202ENST00000378182 PCMT1P22061 227 aa12.45□□□□□ -0.42
TRIM13-202ENST00000378182 UCNP55089 124 aa12.45□□□□□ -0.42
TRIM13-202ENST00000378182 ZNF154Q13106 437 aa12.45□□□□□ -0.42
TRIM13-202ENST00000378182 SPANXN1Q5VSR9 72 aa12.45□□□□□ -0.42
TRIM13-202ENST00000378182 SPICQ8N5J4 248 aa12.45□□□□□ -0.42
TRIM13-202ENST00000378182 OR4X1Q8NH49 305 aa12.45□□□□□ -0.42
TRIM13-202ENST00000378182 ASB5Q8WWX0 329 aa12.45□□□□□ -0.42
TRIM13-202ENST00000378182 PTP4A1Q93096 173 aa12.45□□□□□ -0.42
TRIM13-202ENST00000378182 ZNF658BQ4V348 819 aaPredicted RBP12.45□□□□□ -0.42
TRIM13-202ENST00000378182 SLC23A3Q6PIS1 610 aa12.45□□□□□ -0.42
TRIM13-202ENST00000378182 Q6ZN92 141 aa12.45□□□□□ -0.42
TRIM13-202ENST00000378182 MDP1Q86V88 176 aa12.45□□□□□ -0.42
TRIM13-202ENST00000378182 LRP11Q86VZ4 500 aa12.45□□□□□ -0.42
TRIM13-202ENST00000378182 TMEM18Q96B42 140 aa12.45□□□□□ -0.42
TRIM13-202ENST00000378182 KCNJ3P48549 501 aa12.44□□□□□ -0.42
TRIM13-202ENST00000378182 SPCS3P61009 180 aa12.44□□□□□ -0.42
TRIM13-202ENST00000378182 PSG5Q15238 335 aa12.44□□□□□ -0.42
TRIM13-202ENST00000378182 LINC01555Q8NAE3 123 aa12.44□□□□□ -0.42
TRIM13-202ENST00000378182 ZNF738Q8NE65 137 aa12.44□□□□□ -0.42
TRIM13-202ENST00000378182 OR4B1Q8NGF8 309 aa12.44□□□□□ -0.42
TRIM13-202ENST00000378182 TNFRSF12AQ9NP84 129 aa12.44□□□□□ -0.42
TRIM13-202ENST00000378182 FCN1O00602 326 aa12.44□□□□□ -0.42
TRIM13-202ENST00000378182 RAE1P78406 368 aaKnown RBP12.44□□□□□ -0.42
TRIM13-202ENST00000378182 HTRA4P83105 476 aaPredicted RBP12.44□□□□□ -0.42
TRIM13-202ENST00000378182 C19orf35Q6ZS72 473 aa12.44□□□□□ -0.42
TRIM13-202ENST00000378182 D2HGDHQ8N465 521 aa12.44□□□□□ -0.42
TRIM13-202ENST00000378182 OR2Y1Q8NGV0 311 aa12.44□□□□□ -0.42
TRIM13-202ENST00000378182 ZNF629Q9UEG4 869 aaPredicted RBP12.44□□□□□ -0.42
TRIM13-202ENST00000378182 FFAR1O14842 300 aa12.44□□□□□ -0.42
TRIM13-202ENST00000378182 OR8A1Q8NGG7 326 aa12.44□□□□□ -0.42
TRIM13-202ENST00000378182 ZNF519Q8TB69 540 aa12.44□□□□□ -0.42
TRIM13-202ENST00000378182 METTL26Q96S19 204 aa12.44□□□□□ -0.42
TRIM13-202ENST00000378182 SOSTQ9BQB4 213 aa12.44□□□□□ -0.42
TRIM13-202ENST00000378182 TMEM204Q9BSN7 226 aa12.44□□□□□ -0.42
TRIM13-202ENST00000378182 ZNF426Q9BUY5 554 aa12.44□□□□□ -0.42
TRIM13-202ENST00000378182 WDR13Q9H1Z4 485 aa12.44□□□□□ -0.42
TRIM13-202ENST00000378182 IL17BQ9UHF5 180 aa12.44□□□□□ -0.42
TRIM13-202ENST00000378182 DICER1Q9UPY3 1922 aaKnown RBP12.44□□□□□ -0.42
TRIM13-202ENST00000378182 CKAP5Q14008 2032 aa12.44□□□□□ -0.42
TRIM13-202ENST00000378182 NUBP1P53384 320 aa12.44□□□□□ -0.42
TRIM13-202ENST00000378182 IZUMO4Q1ZYL8 232 aa12.44□□□□□ -0.42
TRIM13-202ENST00000378182 TEX261Q6UWH6 196 aa12.44□□□□□ -0.42
TRIM13-202ENST00000378182 GVQW1Q8N7I0 195 aa12.44□□□□□ -0.42
TRIM13-202ENST00000378182 OR10G4Q8NGN3 311 aa12.44□□□□□ -0.42
TRIM13-202ENST00000378182 OR10G9Q8NGN4 311 aa12.44□□□□□ -0.42
TRIM13-202ENST00000378182 OR10G7Q8NGN6 311 aa12.44□□□□□ -0.42
TRIM13-202ENST00000378182 DNAJB12Q9NXW2 375 aaKnown RBP12.44□□□□□ -0.42
TRIM13-202ENST00000378182 KIR3DL2P43630 455 aa12.44□□□□□ -0.42
TRIM13-202ENST00000378182 PTOV1Q86YD1 416 aa12.44□□□□□ -0.42
TRIM13-202ENST00000378182 EID2BQ96D98 161 aa12.44□□□□□ -0.42
TRIM13-202ENST00000378182 FAM24AA6NFZ4 105 aa12.44□□□□□ -0.42
TRIM13-202ENST00000378182 HIST1H1EP10412 219 aaKnown RBP12.44□□□□□ -0.42
TRIM13-202ENST00000378182 MS4A5Q9H3V2 200 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms