RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 GRIFINA4D1Z8 144 aa10.4□□□□□ -0.74
NPHP4-202ENST00000378161 HLA-DOBP13765 273 aa10.4□□□□□ -0.74
NPHP4-202ENST00000378161 UCP2P55851 309 aa10.4□□□□□ -0.74
NPHP4-202ENST00000378161 DEFB103AP81534 67 aa10.4□□□□□ -0.74
NPHP4-202ENST00000378161 SRSF4Q08170 494 aaKnown RBP10.4□□□□□ -0.74
NPHP4-202ENST00000378161 ZNF506Q5JVG8 444 aa10.4□□□□□ -0.74
NPHP4-202ENST00000378161 ASTLQ6HA08 431 aaPredicted RBP10.4□□□□□ -0.74
NPHP4-202ENST00000378161 Q7L0L9 218 aa10.4□□□□□ -0.74
NPHP4-202ENST00000378161 ATOH7Q8N100 152 aa10.4□□□□□ -0.74
NPHP4-202ENST00000378161 SLC16A11Q8NCK7 471 aa10.4□□□□□ -0.74
NPHP4-202ENST00000378161 APOOQ9BUR5 198 aa10.4□□□□□ -0.74
NPHP4-202ENST00000378161 ULBP3Q9BZM4 244 aa10.4□□□□□ -0.74
NPHP4-202ENST00000378161 TBL2Q9Y4P3 447 aaKnown RBP10.4□□□□□ -0.74
NPHP4-202ENST00000378161 ERGP11308 486 aa10.4□□□□□ -0.75
NPHP4-202ENST00000378161 MFSD12Q6NUT3 480 aa10.4□□□□□ -0.75
NPHP4-202ENST00000378161 CDC20BQ86Y33 519 aa10.4□□□□□ -0.75
NPHP4-202ENST00000378161 ZNF808Q8N4W9 903 aaPredicted RBP10.4□□□□□ -0.75
NPHP4-202ENST00000378161 SUMF1Q8NBK3 374 aa10.4□□□□□ -0.75
NPHP4-202ENST00000378161 C11orf40Q8WZ69 217 aa10.4□□□□□ -0.75
NPHP4-202ENST00000378161 SPSB1Q96BD6 273 aa10.4□□□□□ -0.75
NPHP4-202ENST00000378161 PECRQ9BY49 303 aa10.4□□□□□ -0.75
NPHP4-202ENST00000378161 HHLA2Q9UM44 414 aa10.4□□□□□ -0.75
NPHP4-202ENST00000378161 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.4□□□□□ -0.75
NPHP4-202ENST00000378161 LDB3O75112 727 aa10.39□□□□□ -0.75
NPHP4-202ENST00000378161 ZNF85Q03923 595 aa10.39□□□□□ -0.75
NPHP4-202ENST00000378161 OR51A2Q8NGJ7 313 aa10.39□□□□□ -0.75
NPHP4-202ENST00000378161 OR1B1Q8NGR6 318 aa10.39□□□□□ -0.75
NPHP4-202ENST00000378161 SPXQ9BT56 116 aa10.39□□□□□ -0.75
NPHP4-202ENST00000378161 NEUROG3Q9Y4Z2 214 aa10.39□□□□□ -0.75
NPHP4-202ENST00000378161 A0A1W2PR48 441 aa10.39□□□□□ -0.75
NPHP4-202ENST00000378161 BCL2P10415 239 aa10.39□□□□□ -0.75
NPHP4-202ENST00000378161 CEBPBP17676 345 aa10.39□□□□□ -0.75
NPHP4-202ENST00000378161 ATP6V0CP27449 155 aa10.39□□□□□ -0.75
NPHP4-202ENST00000378161 OTX1P32242 354 aaPredicted RBP10.39□□□□□ -0.75
NPHP4-202ENST00000378161 BSGP35613 385 aa10.39□□□□□ -0.75
NPHP4-202ENST00000378161 UBE2NP61088 152 aaKnown RBP10.39□□□□□ -0.75
NPHP4-202ENST00000378161 HERV-K104P63124 156 aa10.39□□□□□ -0.75
NPHP4-202ENST00000378161 TCTN1Q2MV58 587 aa10.39□□□□□ -0.75
NPHP4-202ENST00000378161 BPIFA4PQ86YQ2 179 aa10.39□□□□□ -0.75
NPHP4-202ENST00000378161 TNFRSF13CQ96RJ3 184 aa10.39□□□□□ -0.75
NPHP4-202ENST00000378161 TPPP3Q9BW30 176 aa10.39□□□□□ -0.75
NPHP4-202ENST00000378161 RCL1Q9Y2P8 373 aaKnown RBP10.39□□□□□ -0.75
NPHP4-202ENST00000378161 RAE1P78406 368 aaKnown RBP10.39□□□□□ -0.75
NPHP4-202ENST00000378161 ACKR1Q16570 336 aa10.39□□□□□ -0.75
NPHP4-202ENST00000378161 METRNLQ641Q3 311 aa10.39□□□□□ -0.75
NPHP4-202ENST00000378161 MRPL43Q8N983 215 aaKnown RBP10.39□□□□□ -0.75
NPHP4-202ENST00000378161 GNRHR2Q96P88 292 aa10.39□□□□□ -0.75
NPHP4-202ENST00000378161 WNT10AQ9GZT5 417 aa10.39□□□□□ -0.75
NPHP4-202ENST00000378161 MAGT1Q9H0U3 335 aa10.39□□□□□ -0.75
NPHP4-202ENST00000378161 JKAMPQ9P055 326 aa10.39□□□□□ -0.75
NPHP4-202ENST00000378161 SS18L2Q9UHA2 77 aa10.39□□□□□ -0.75
NPHP4-202ENST00000378161 MRPS16Q9Y3D3 137 aaKnown RBP10.39□□□□□ -0.75
NPHP4-202ENST00000378161 COL4A5P29400 1685 aa10.39□□□□□ -0.75
NPHP4-202ENST00000378161 HYAL3O43820 417 aaPredicted RBP10.38□□□□□ -0.75
NPHP4-202ENST00000378161 ZNF205O95201 554 aa10.38□□□□□ -0.75
NPHP4-202ENST00000378161 ABHD16AO95870 558 aa10.38□□□□□ -0.75
NPHP4-202ENST00000378161 IL13RA2Q14627 380 aa10.38□□□□□ -0.75
NPHP4-202ENST00000378161 EXOSC7Q15024 291 aaKnown RBP10.38□□□□□ -0.75
NPHP4-202ENST00000378161 MRPL21Q7Z2W9 205 aaKnown RBP10.38□□□□□ -0.75
NPHP4-202ENST00000378161 TSACCQ96A04 125 aaPredicted RBP10.38□□□□□ -0.75
NPHP4-202ENST00000378161 BOD1Q96IK1 185 aa10.38□□□□□ -0.75
NPHP4-202ENST00000378161 PGLYRP3Q96LB9 341 aa10.38□□□□□ -0.75
NPHP4-202ENST00000378161 LMF2Q9BU23 707 aaKnown RBP10.38□□□□□ -0.75
NPHP4-202ENST00000378161 SERTAD4Q9NUC0 356 aa10.38□□□□□ -0.75
NPHP4-202ENST00000378161 GCM2O75603 506 aaPredicted RBP10.38□□□□□ -0.75
NPHP4-202ENST00000378161 LIPFP07098 398 aa10.38□□□□□ -0.75
NPHP4-202ENST00000378161 TSPOP30536 169 aa10.38□□□□□ -0.75
NPHP4-202ENST00000378161 NTSR1P30989 418 aa10.38□□□□□ -0.75
NPHP4-202ENST00000378161 P2RY2P41231 377 aa10.38□□□□□ -0.75
NPHP4-202ENST00000378161 MESP2Q0VG99 397 aa10.38□□□□□ -0.75
NPHP4-202ENST00000378161 OR2M7Q8NG81 312 aa10.38□□□□□ -0.75
NPHP4-202ENST00000378161 TMEM191AQ9H0A3 160 aa10.38□□□□□ -0.75
NPHP4-202ENST00000378161 PLEKHF2Q9H8W4 249 aa10.38□□□□□ -0.75
NPHP4-202ENST00000378161 ELOVL5Q9NYP7 299 aa10.38□□□□□ -0.75
NPHP4-202ENST00000378161 SIRPB1O00241 398 aa10.38□□□□□ -0.75
NPHP4-202ENST00000378161 DPTQ07507 201 aa10.38□□□□□ -0.75
NPHP4-202ENST00000378161 NR0B2Q15466 257 aa10.38□□□□□ -0.75
NPHP4-202ENST00000378161 TMEM52BQ4KMG9 183 aa10.38□□□□□ -0.75
NPHP4-202ENST00000378161 ANKRD33Q7Z3H0 272 aa10.38□□□□□ -0.75
NPHP4-202ENST00000378161 C1orf174Q8IYL3 243 aa10.38□□□□□ -0.75
NPHP4-202ENST00000378161 SLC25A43Q8WUT9 341 aaPredicted RBP10.38□□□□□ -0.75
NPHP4-202ENST00000378161 RNF133Q8WVZ7 376 aa10.38□□□□□ -0.75
NPHP4-202ENST00000378161 AQP3Q92482 292 aa10.38□□□□□ -0.75
NPHP4-202ENST00000378161 BADQ92934 168 aa10.38□□□□□ -0.75
NPHP4-202ENST00000378161 RSG1Q9BU20 258 aa10.38□□□□□ -0.75
NPHP4-202ENST00000378161 SSBP4Q9BWG4 385 aaPredicted RBP10.38□□□□□ -0.75
NPHP4-202ENST00000378161 IL21Q9HBE4 155 aa10.38□□□□□ -0.75
NPHP4-202ENST00000378161 ARID2Q68CP9 1835 aa10.38□□□□□ -0.75
NPHP4-202ENST00000378161 F2RP25116 425 aa10.37□□□□□ -0.75
NPHP4-202ENST00000378161 FAM162BQ5T6X4 162 aa10.37□□□□□ -0.75
NPHP4-202ENST00000378161 Q6ZVH6 145 aa10.37□□□□□ -0.75
NPHP4-202ENST00000378161 NOXO1Q8NFA2 376 aa10.37□□□□□ -0.75
NPHP4-202ENST00000378161 RLN3Q8WXF3 142 aa10.37□□□□□ -0.75
NPHP4-202ENST00000378161 ASB10Q8WXI3 467 aa10.37□□□□□ -0.75
NPHP4-202ENST00000378161 OR1A1Q9P1Q5 309 aa10.37□□□□□ -0.75
NPHP4-202ENST00000378161 ST6GALNAC2Q9UJ37 374 aa10.37□□□□□ -0.75
NPHP4-202ENST00000378161 K7ESM1 405 aa10.37□□□□□ -0.75
NPHP4-202ENST00000378161 SDCBPO00560 298 aaPredicted RBP10.37□□□□□ -0.75
NPHP4-202ENST00000378161 BCL6P41182 706 aa10.37□□□□□ -0.75
NPHP4-202ENST00000378161 MRGPRGQ86SM5 289 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms