RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 EDARADDQ8WWZ3 215 aa10.61□□□□□ -0.71
PCDHA9-201ENST00000378122 MEGF10Q96KG7 1140 aa10.61□□□□□ -0.71
PCDHA9-201ENST00000378122 CACNG5Q9UF02 275 aa10.61□□□□□ -0.71
PCDHA9-201ENST00000378122 ARFGEF1Q9Y6D6 1849 aa10.61□□□□□ -0.71
PCDHA9-201ENST00000378122 TRGV10A0A0A0MS01 117 aa10.61□□□□□ -0.71
PCDHA9-201ENST00000378122 SPTY2D1-AS1A0A0U1RR47 76 aa10.61□□□□□ -0.71
PCDHA9-201ENST00000378122 SMIM6P0DI80 62 aa10.61□□□□□ -0.71
PCDHA9-201ENST00000378122 ZNF788Q6ZQV5 615 aa10.61□□□□□ -0.71
PCDHA9-201ENST00000378122 OR2D2Q9H210 308 aa10.61□□□□□ -0.71
PCDHA9-201ENST00000378122 TEX50A0A1B0GTY4 177 aa10.6□□□□□ -0.71
PCDHA9-201ENST00000378122 FAM87AP0C7U9 286 aa10.6□□□□□ -0.71
PCDHA9-201ENST00000378122 RPL13AP40429 203 aaKnown RBP10.6□□□□□ -0.71
PCDHA9-201ENST00000378122 Q6ZN92 141 aa10.6□□□□□ -0.71
PCDHA9-201ENST00000378122 OR2C3Q8N628 320 aa10.6□□□□□ -0.71
PCDHA9-201ENST00000378122 CA10Q9NS85 328 aa10.6□□□□□ -0.71
PCDHA9-201ENST00000378122 HPXP02790 462 aa10.6□□□□□ -0.71
PCDHA9-201ENST00000378122 SLC25A5P05141 298 aaKnown RBP10.6□□□□□ -0.71
PCDHA9-201ENST00000378122 PF4V1P10720 104 aa10.6□□□□□ -0.71
PCDHA9-201ENST00000378122 C19orf35Q6ZS72 473 aa10.6□□□□□ -0.71
PCDHA9-201ENST00000378122 C10orf111Q8N326 155 aa10.6□□□□□ -0.71
PCDHA9-201ENST00000378122 LHX9Q9NQ69 397 aa10.6□□□□□ -0.71
PCDHA9-201ENST00000378122 NAT8Q9UHE5 227 aa10.6□□□□□ -0.71
PCDHA9-201ENST00000378122 IGHV5-51A0A0C4DH38 117 aa10.6□□□□□ -0.71
PCDHA9-201ENST00000378122 NGFP01138 241 aa10.6□□□□□ -0.71
PCDHA9-201ENST00000378122 ATP5J2P56134 94 aa10.6□□□□□ -0.71
PCDHA9-201ENST00000378122 GUCA2BQ16661 112 aa10.6□□□□□ -0.71
PCDHA9-201ENST00000378122 MESTQ5EB52 335 aa10.6□□□□□ -0.71
PCDHA9-201ENST00000378122 TSPO2Q5TGU0 170 aa10.6□□□□□ -0.71
PCDHA9-201ENST00000378122 VWA1Q6PCB0 445 aa10.6□□□□□ -0.71
PCDHA9-201ENST00000378122 TBC1D26Q86UD7 250 aa10.6□□□□□ -0.71
PCDHA9-201ENST00000378122 OR8B12Q8NGG6 310 aa10.6□□□□□ -0.71
PCDHA9-201ENST00000378122 OR10G4Q8NGN3 311 aa10.6□□□□□ -0.71
PCDHA9-201ENST00000378122 OR10G9Q8NGN4 311 aa10.6□□□□□ -0.71
PCDHA9-201ENST00000378122 OR10G7Q8NGN6 311 aa10.6□□□□□ -0.71
PCDHA9-201ENST00000378122 RAB40CQ96S21 281 aa10.6□□□□□ -0.71
PCDHA9-201ENST00000378122 MIOXQ9UGB7 285 aa10.6□□□□□ -0.71
PCDHA9-201ENST00000378122 AMDHD2Q9Y303 409 aa10.6□□□□□ -0.71
PCDHA9-201ENST00000378122 BMPR1BO00238 502 aa10.6□□□□□ -0.71
PCDHA9-201ENST00000378122 NKX2-8O15522 239 aa10.6□□□□□ -0.71
PCDHA9-201ENST00000378122 OGG1O15527 345 aa10.6□□□□□ -0.71
PCDHA9-201ENST00000378122 SCGB1C2P0DMR2 95 aa10.6□□□□□ -0.71
PCDHA9-201ENST00000378122 PPP1CAP62136 330 aa10.6□□□□□ -0.71
PCDHA9-201ENST00000378122 HOXA4Q00056 320 aaPredicted RBP10.6□□□□□ -0.71
PCDHA9-201ENST00000378122 CLEC18BQ6UXF7 455 aa10.6□□□□□ -0.71
PCDHA9-201ENST00000378122 SMRP1Q8NCR6 262 aa10.6□□□□□ -0.71
PCDHA9-201ENST00000378122 PSG11Q9UQ72 335 aa10.6□□□□□ -0.71
PCDHA9-201ENST00000378122 FZD5Q13467 585 aa10.6□□□□□ -0.71
PCDHA9-201ENST00000378122 Q9N2K0 584 aa10.6□□□□□ -0.71
PCDHA9-201ENST00000378122 NHSL1Q5SYE7 1610 aa10.59□□□□□ -0.71
PCDHA9-201ENST00000378122 GLI3P10071 1580 aa10.59□□□□□ -0.71
PCDHA9-201ENST00000378122 OPRK1P41145 380 aa10.59□□□□□ -0.71
PCDHA9-201ENST00000378122 NHLH1Q02575 133 aa10.59□□□□□ -0.71
PCDHA9-201ENST00000378122 NHLH2Q02577 135 aa10.59□□□□□ -0.71
PCDHA9-201ENST00000378122 Q3ZCU0 254 aa10.59□□□□□ -0.71
PCDHA9-201ENST00000378122 A0A1B0GTQ1 180 aa10.59□□□□□ -0.71
PCDHA9-201ENST00000378122 RPLP1P05386 114 aaKnown RBP10.59□□□□□ -0.71
PCDHA9-201ENST00000378122 CTLA4P16410 223 aa10.59□□□□□ -0.71
PCDHA9-201ENST00000378122 ACER2Q5QJU3 275 aa10.59□□□□□ -0.71
PCDHA9-201ENST00000378122 KCNK17Q96T54 332 aa10.59□□□□□ -0.71
PCDHA9-201ENST00000378122 DOK5Q9P104 306 aa10.59□□□□□ -0.71
PCDHA9-201ENST00000378122 KNL1Q8NG31 2342 aa10.59□□□□□ -0.71
PCDHA9-201ENST00000378122 RP1L1Q8IWN7 2480 aaPredicted RBP10.59□□□□□ -0.71
PCDHA9-201ENST00000378122 GEMIN2O14893 280 aaKnown RBP10.59□□□□□ -0.71
PCDHA9-201ENST00000378122 TOX3O15405 576 aaPredicted RBP10.59□□□□□ -0.71
PCDHA9-201ENST00000378122 AMTP48728 403 aa10.59□□□□□ -0.71
PCDHA9-201ENST00000378122 IFITM3Q01628 133 aa10.59□□□□□ -0.71
PCDHA9-201ENST00000378122 IRF3Q14653 427 aa10.59□□□□□ -0.71
PCDHA9-201ENST00000378122 ZIC1Q15915 447 aa10.59□□□□□ -0.71
PCDHA9-201ENST00000378122 ZNF141Q15928 474 aa10.59□□□□□ -0.71
PCDHA9-201ENST00000378122 RAB1CQ92928 201 aa10.59□□□□□ -0.71
PCDHA9-201ENST00000378122 SNX22Q96L94 193 aa10.59□□□□□ -0.71
PCDHA9-201ENST00000378122 LILRA5A6NI73 299 aa10.59□□□□□ -0.71
PCDHA9-201ENST00000378122 CCKARP32238 428 aa10.59□□□□□ -0.71
PCDHA9-201ENST00000378122 P2RY1P47900 373 aa10.59□□□□□ -0.71
PCDHA9-201ENST00000378122 TRA2AQ13595 282 aaKnown RBP eCLIP10.59□□□□□ -0.71
PCDHA9-201ENST00000378122 IL11RAQ14626 422 aa10.59□□□□□ -0.71
PCDHA9-201ENST00000378122 ALG14Q96F25 216 aa10.59□□□□□ -0.71
PCDHA9-201ENST00000378122 BET1LQ9NYM9 111 aa10.59□□□□□ -0.71
PCDHA9-201ENST00000378122 ICAM5Q9UMF0 924 aa10.59□□□□□ -0.71
PCDHA9-201ENST00000378122 KCNMB2Q9Y691 235 aa10.59□□□□□ -0.71
PCDHA9-201ENST00000378122 IGHV3-21A0A0B4J1V1 117 aa10.59□□□□□ -0.71
PCDHA9-201ENST00000378122 SULT1A1P50225 295 aa10.59□□□□□ -0.71
PCDHA9-201ENST00000378122 POLR2GP62487 172 aaKnown RBP eCLIP10.59□□□□□ -0.71
PCDHA9-201ENST00000378122 OR1L6Q8NGR2 347 aa10.59□□□□□ -0.71
PCDHA9-201ENST00000378122 GSX1Q9H4S2 264 aaPredicted RBP10.59□□□□□ -0.71
PCDHA9-201ENST00000378122 NEU3Q9UQ49 428 aa10.59□□□□□ -0.71
PCDHA9-201ENST00000378122 DOCK5Q9H7D0 1870 aa10.59□□□□□ -0.71
PCDHA9-201ENST00000378122 SOCS1O15524 211 aa10.58□□□□□ -0.71
PCDHA9-201ENST00000378122 GP1BAP07359 652 aa10.58□□□□□ -0.71
PCDHA9-201ENST00000378122 OR10AC1Q8NH08 325 aa10.58□□□□□ -0.71
PCDHA9-201ENST00000378122 ZNF764Q96H86 408 aaPredicted RBP10.58□□□□□ -0.71
PCDHA9-201ENST00000378122 ATP5SQ99766 215 aa10.58□□□□□ -0.71
PCDHA9-201ENST00000378122 SVILO95425 2214 aa10.58□□□□□ -0.72
PCDHA9-201ENST00000378122 M0R2Z0 102 aa10.58□□□□□ -0.72
PCDHA9-201ENST00000378122 F12P00748 615 aaPredicted RBP10.58□□□□□ -0.72
PCDHA9-201ENST00000378122 CISD3P0C7P0 127 aa10.58□□□□□ -0.72
PCDHA9-201ENST00000378122 PATE4P0C8F1 98 aa10.58□□□□□ -0.72
PCDHA9-201ENST00000378122 ZNF32P17041 273 aa10.58□□□□□ -0.72
PCDHA9-201ENST00000378122 C21orf58P58505 322 aa10.58□□□□□ -0.72
PCDHA9-201ENST00000378122 GNG3P63215 75 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms