RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 GFI1Q99684 422 aa10.92□□□□□ -0.66
CKAP2-202ENST00000378034 SIRPDQ9H106 197 aa10.92□□□□□ -0.66
CKAP2-202ENST00000378034 PLGRKTQ9HBL7 147 aa10.92□□□□□ -0.66
CKAP2-202ENST00000378034 CRTAPO75718 401 aaPredicted RBP10.91□□□□□ -0.66
CKAP2-202ENST00000378034 MMP9P14780 707 aa10.91□□□□□ -0.66
CKAP2-202ENST00000378034 MGMTP16455 207 aa10.91□□□□□ -0.66
CKAP2-202ENST00000378034 HOXB4P17483 251 aaPredicted RBP10.91□□□□□ -0.66
CKAP2-202ENST00000378034 RAB3BP20337 219 aa10.91□□□□□ -0.66
CKAP2-202ENST00000378034 CFPP27918 469 aa10.91□□□□□ -0.66
CKAP2-202ENST00000378034 ARF6P62330 175 aa10.91□□□□□ -0.66
CKAP2-202ENST00000378034 BLMHQ13867 455 aa10.91□□□□□ -0.66
CKAP2-202ENST00000378034 FAM185AQ8N0U4 392 aa10.91□□□□□ -0.66
CKAP2-202ENST00000378034 OR4S1Q8NGB4 309 aa10.91□□□□□ -0.66
CKAP2-202ENST00000378034 KCNG3Q8TAE7 436 aa10.91□□□□□ -0.66
CKAP2-202ENST00000378034 SLC25A28Q96A46 364 aa10.91□□□□□ -0.66
CKAP2-202ENST00000378034 KCTD7Q96MP8 289 aa10.91□□□□□ -0.66
CKAP2-202ENST00000378034 OR51E2Q9H255 320 aa10.91□□□□□ -0.66
CKAP2-202ENST00000378034 SPACA1Q9HBV2 294 aa10.91□□□□□ -0.66
CKAP2-202ENST00000378034 C19orf12Q9NSK7 152 aa10.91□□□□□ -0.66
CKAP2-202ENST00000378034 ONECUT1Q9UBC0 465 aa10.91□□□□□ -0.66
CKAP2-202ENST00000378034 NIPBLQ6KC79 2804 aaeCLIP10.91□□□□□ -0.66
CKAP2-202ENST00000378034 hADV38S2A0JD32 116 aa10.9□□□□□ -0.66
CKAP2-202ENST00000378034 GADD45AP24522 165 aa10.9□□□□□ -0.66
CKAP2-202ENST00000378034 EDDM3BP56851 147 aa10.9□□□□□ -0.66
CKAP2-202ENST00000378034 BPIFB3P59826 476 aa10.9□□□□□ -0.66
CKAP2-202ENST00000378034 PAX5Q02548 391 aa10.9□□□□□ -0.66
CKAP2-202ENST00000378034 RAB11BQ15907 218 aa10.9□□□□□ -0.66
CKAP2-202ENST00000378034 TMEM200BQ69YZ2 307 aa10.9□□□□□ -0.66
CKAP2-202ENST00000378034 YIPF6Q96EC8 236 aa10.9□□□□□ -0.66
CKAP2-202ENST00000378034 CHCHD6Q9BRQ6 235 aa10.9□□□□□ -0.66
CKAP2-202ENST00000378034 MRPS26Q9BYN8 205 aaKnown RBP10.9□□□□□ -0.66
CKAP2-202ENST00000378034 CHST6Q9GZX3 395 aa10.9□□□□□ -0.66
CKAP2-202ENST00000378034 NCOR1P1Q9H4R4 102 aa10.9□□□□□ -0.66
CKAP2-202ENST00000378034 TRAV24A0A0B4J272 114 aa10.9□□□□□ -0.66
CKAP2-202ENST00000378034 A0A1W2PP11 408 aa10.9□□□□□ -0.66
CKAP2-202ENST00000378034 hCG_1809904A0A1W2PP81 198 aa10.9□□□□□ -0.66
CKAP2-202ENST00000378034 A0A1W2PPE2 198 aa10.9□□□□□ -0.66
CKAP2-202ENST00000378034 A0A1W2PR64 198 aa10.9□□□□□ -0.66
CKAP2-202ENST00000378034 A0A1W2PRV1 198 aa10.9□□□□□ -0.66
CKAP2-202ENST00000378034 SHISA3A0PJX4 238 aa10.9□□□□□ -0.66
CKAP2-202ENST00000378034 GEMIN2O14893 280 aaKnown RBP10.9□□□□□ -0.66
CKAP2-202ENST00000378034 OR7C1O76099 320 aaPredicted RBP10.9□□□□□ -0.66
CKAP2-202ENST00000378034 SMIM18P0DKX4 95 aa10.9□□□□□ -0.66
CKAP2-202ENST00000378034 ARSBP15848 533 aa10.9□□□□□ -0.66
CKAP2-202ENST00000378034 P2RX3P56373 397 aa10.9□□□□□ -0.66
CKAP2-202ENST00000378034 PAN3Q58A45 887 aaKnown RBP10.9□□□□□ -0.66
CKAP2-202ENST00000378034 OR2W3Q7Z3T1 314 aa10.9□□□□□ -0.66
CKAP2-202ENST00000378034 TMEM104Q8NE00 496 aa10.9□□□□□ -0.66
CKAP2-202ENST00000378034 OR4M1Q8NGD0 313 aa10.9□□□□□ -0.66
CKAP2-202ENST00000378034 Q96M66 194 aa10.9□□□□□ -0.66
CKAP2-202ENST00000378034 PCGF1Q9BSM1 259 aa10.9□□□□□ -0.66
CKAP2-202ENST00000378034 SELENOIQ9C0D9 397 aa10.9□□□□□ -0.66
CKAP2-202ENST00000378034 UNKLQ9H9P5 680 aaKnown RBP10.9□□□□□ -0.66
CKAP2-202ENST00000378034 FBLN5Q9UBX5 448 aa10.9□□□□□ -0.66
CKAP2-202ENST00000378034 NUP50Q9UKX7 468 aa10.9□□□□□ -0.66
CKAP2-202ENST00000378034 GLAP06280 429 aa10.89□□□□□ -0.67
CKAP2-202ENST00000378034 VSIG8P0DPA2 414 aa10.89□□□□□ -0.67
CKAP2-202ENST00000378034 EDDM3AQ14507 147 aa10.89□□□□□ -0.67
CKAP2-202ENST00000378034 TAF9Q16594 264 aa10.89□□□□□ -0.67
CKAP2-202ENST00000378034 KLF17Q5JT82 389 aaPredicted RBP10.89□□□□□ -0.67
CKAP2-202ENST00000378034 METAP1DQ6UB28 335 aaPredicted RBP10.89□□□□□ -0.67
CKAP2-202ENST00000378034 TBX15Q96SF7 602 aa10.89□□□□□ -0.67
CKAP2-202ENST00000378034 DPCDQ9BVM2 203 aaPredicted RBP10.89□□□□□ -0.67
CKAP2-202ENST00000378034 BARHL1Q9BZE3 327 aa10.89□□□□□ -0.67
CKAP2-202ENST00000378034 PPA2Q9H2U2 334 aa10.89□□□□□ -0.67
CKAP2-202ENST00000378034 BANF2Q9H503 90 aa10.89□□□□□ -0.67
CKAP2-202ENST00000378034 METTL8Q9H825 291 aaKnown RBP10.89□□□□□ -0.67
CKAP2-202ENST00000378034 STEAP1Q9UHE8 339 aa10.89□□□□□ -0.67
CKAP2-202ENST00000378034 LINC00312Q9Y6C7 94 aa10.89□□□□□ -0.67
CKAP2-202ENST00000378034 LOC100506127A0A0U1RQW1 187 aa10.88□□□□□ -0.67
CKAP2-202ENST00000378034 IFITM5A6NNB3 132 aa10.88□□□□□ -0.67
CKAP2-202ENST00000378034 TMEM14DPA8MWL7 114 aa10.88□□□□□ -0.67
CKAP2-202ENST00000378034 IFNA2P01563 188 aa10.88□□□□□ -0.67
CKAP2-202ENST00000378034 RBP4P02753 201 aa10.88□□□□□ -0.67
CKAP2-202ENST00000378034 RPS27AP62979 156 aaKnown RBP10.88□□□□□ -0.67
CKAP2-202ENST00000378034 QRFPP83859 136 aa10.88□□□□□ -0.67
CKAP2-202ENST00000378034 GPR157Q5UAW9 335 aa10.88□□□□□ -0.67
CKAP2-202ENST00000378034 VMO1Q7Z5L0 202 aa10.88□□□□□ -0.67
CKAP2-202ENST00000378034 Q8N7P7 452 aa10.88□□□□□ -0.67
CKAP2-202ENST00000378034 SUMF2Q8NBJ7 301 aa10.88□□□□□ -0.67
CKAP2-202ENST00000378034 OR13F1Q8NGS4 319 aa10.88□□□□□ -0.67
CKAP2-202ENST00000378034 CORO2AQ92828 525 aa10.88□□□□□ -0.67
CKAP2-202ENST00000378034 TMEM59Q9BXS4 323 aa10.88□□□□□ -0.67
CKAP2-202ENST00000378034 RCC2Q9P258 522 aaKnown RBP10.88□□□□□ -0.67
CKAP2-202ENST00000378034 UBE2J1Q9Y385 318 aaPredicted RBP10.88□□□□□ -0.67
CKAP2-202ENST00000378034 SETD2Q9BYW2 2564 aaPredicted RBP10.88□□□□□ -0.67
CKAP2-202ENST00000378034 DSCAML1Q8TD84 2053 aa10.88□□□□□ -0.67
CKAP2-202ENST00000378034 NOTOA8MTQ0 251 aa10.88□□□□□ -0.67
CKAP2-202ENST00000378034 AIPO00170 330 aa10.88□□□□□ -0.67
CKAP2-202ENST00000378034 AIREO43918 545 aa10.88□□□□□ -0.67
CKAP2-202ENST00000378034 MPIG6BO95866 241 aa10.88□□□□□ -0.67
CKAP2-202ENST00000378034 ZNF728P0DKX0 622 aa10.88□□□□□ -0.67
CKAP2-202ENST00000378034 EPHA1P21709 976 aa10.88□□□□□ -0.67
CKAP2-202ENST00000378034 PRTN3P24158 256 aa10.88□□□□□ -0.67
CKAP2-202ENST00000378034 FPR2P25090 351 aa10.88□□□□□ -0.67
CKAP2-202ENST00000378034 AESQ08117 197 aa10.88□□□□□ -0.67
CKAP2-202ENST00000378034 RBM39Q14498 530 aaKnown RBP10.88□□□□□ -0.67
CKAP2-202ENST00000378034 P2RY14Q15391 338 aa10.88□□□□□ -0.67
CKAP2-202ENST00000378034 KRBOX4Q5JUW0 171 aa10.88□□□□□ -0.67
CKAP2-202ENST00000378034 ATAD3CQ5T2N8 411 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms