RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 PLA2G5P39877 138 aa13.6□□□□□ -0.23
CSNK1A1-202ENST00000377843 FGF8P55075 233 aaPredicted RBP13.6□□□□□ -0.23
CSNK1A1-202ENST00000377843 TLE4Q04727 773 aa13.6□□□□□ -0.23
CSNK1A1-202ENST00000377843 ZNF154Q13106 437 aa13.6□□□□□ -0.23
CSNK1A1-202ENST00000377843 FAM57BQ71RH2 274 aa13.6□□□□□ -0.23
CSNK1A1-202ENST00000377843 TSLPQ969D9 159 aa13.6□□□□□ -0.23
CSNK1A1-202ENST00000377843 GAL3ST4Q96RP7 486 aa13.6□□□□□ -0.23
CSNK1A1-202ENST00000377843 TM2D1Q9BX74 207 aa13.6□□□□□ -0.23
CSNK1A1-202ENST00000377843 VSIRQ9H7M9 311 aa13.6□□□□□ -0.23
CSNK1A1-202ENST00000377843 LYRM2Q9NU23 88 aaPredicted RBP13.6□□□□□ -0.23
CSNK1A1-202ENST00000377843 CISD1Q9NZ45 108 aaKnown RBP13.6□□□□□ -0.23
CSNK1A1-202ENST00000377843 HNRNPA1P09651 372 aaKnown RBP eCLIP13.59□□□□□ -0.23
CSNK1A1-202ENST00000377843 DLX2Q07687 328 aaPredicted RBP13.59□□□□□ -0.23
CSNK1A1-202ENST00000377843 RPP25Q9BUL9 199 aaKnown RBP13.59□□□□□ -0.23
CSNK1A1-202ENST00000377843 HIPK2Q9H2X6 1198 aa13.59□□□□□ -0.23
CSNK1A1-202ENST00000377843 HBE1P02100 147 aa13.59□□□□□ -0.23
CSNK1A1-202ENST00000377843 BRS3P32247 399 aa13.59□□□□□ -0.23
CSNK1A1-202ENST00000377843 CTHP32929 405 aa13.59□□□□□ -0.23
CSNK1A1-202ENST00000377843 TLE1Q04724 770 aa13.59□□□□□ -0.23
CSNK1A1-202ENST00000377843 MFAP5Q13361 173 aa13.59□□□□□ -0.23
CSNK1A1-202ENST00000377843 RTP5Q14D33 572 aa13.59□□□□□ -0.23
CSNK1A1-202ENST00000377843 ZNF726P1Q15940 193 aa13.59□□□□□ -0.23
CSNK1A1-202ENST00000377843 RSPO4Q2I0M5 234 aaPredicted RBP13.59□□□□□ -0.23
CSNK1A1-202ENST00000377843 TDRG1Q3Y452 100 aa13.59□□□□□ -0.23
CSNK1A1-202ENST00000377843 BRICD5Q6PL45 260 aa13.59□□□□□ -0.23
CSNK1A1-202ENST00000377843 LCN15Q6UWW0 184 aa13.59□□□□□ -0.23
CSNK1A1-202ENST00000377843 OR51G1Q8NGK1 321 aa13.59□□□□□ -0.23
CSNK1A1-202ENST00000377843 ACY3Q96HD9 319 aa13.59□□□□□ -0.23
CSNK1A1-202ENST00000377843 NUDT22Q9BRQ3 303 aa13.59□□□□□ -0.23
CSNK1A1-202ENST00000377843 CD33P20138 364 aa13.58□□□□□ -0.24
CSNK1A1-202ENST00000377843 PGCP20142 388 aa13.58□□□□□ -0.24
CSNK1A1-202ENST00000377843 NKX2-1P43699 371 aaPredicted RBP13.58□□□□□ -0.24
CSNK1A1-202ENST00000377843 HSD17B7P56937 341 aa13.58□□□□□ -0.24
CSNK1A1-202ENST00000377843 ADIRFQ15847 76 aa13.58□□□□□ -0.24
CSNK1A1-202ENST00000377843 FAM189A2Q15884 450 aa13.58□□□□□ -0.24
CSNK1A1-202ENST00000377843 C20orf196Q8IYI0 205 aa13.58□□□□□ -0.24
CSNK1A1-202ENST00000377843 GBGT1Q8N5D6 347 aa13.58□□□□□ -0.24
CSNK1A1-202ENST00000377843 GNPNAT1Q96EK6 184 aaPredicted RBP13.58□□□□□ -0.24
CSNK1A1-202ENST00000377843 CTDSP1Q9GZU7 261 aa13.58□□□□□ -0.24
CSNK1A1-202ENST00000377843 WNT5BQ9H1J7 359 aa13.58□□□□□ -0.24
CSNK1A1-202ENST00000377843 ASCL3Q9NQ33 180 aa13.58□□□□□ -0.24
CSNK1A1-202ENST00000377843 PNO1Q9NRX1 252 aaKnown RBP13.58□□□□□ -0.24
CSNK1A1-202ENST00000377843 ARHGEF17Q96PE2 2063 aaPredicted RBP13.58□□□□□ -0.24
CSNK1A1-202ENST00000377843 RER1O15258 196 aa13.58□□□□□ -0.24
CSNK1A1-202ENST00000377843 GALR2O43603 387 aaPredicted RBP13.58□□□□□ -0.24
CSNK1A1-202ENST00000377843 NUPR1O60356 82 aa13.58□□□□□ -0.24
CSNK1A1-202ENST00000377843 HPRT1P00492 218 aa13.58□□□□□ -0.24
CSNK1A1-202ENST00000377843 CEACAM1P13688 526 aa13.58□□□□□ -0.24
CSNK1A1-202ENST00000377843 ALKBH2Q6NS38 261 aa13.58□□□□□ -0.24
CSNK1A1-202ENST00000377843 ZNF283Q8N7M2 679 aa13.58□□□□□ -0.24
CSNK1A1-202ENST00000377843 ZNF248Q8NDW4 579 aa13.58□□□□□ -0.24
CSNK1A1-202ENST00000377843 LYZL4Q96KX0 146 aa13.58□□□□□ -0.24
CSNK1A1-202ENST00000377843 PLA2G2FQ9BZM2 168 aa13.58□□□□□ -0.24
CSNK1A1-202ENST00000377843 NAGKQ9UJ70 344 aa13.58□□□□□ -0.24
CSNK1A1-202ENST00000377843 F5P12259 2224 aa13.57□□□□□ -0.24
CSNK1A1-202ENST00000377843 TRAV1-1A0A0B4J248 108 aa13.57□□□□□ -0.24
CSNK1A1-202ENST00000377843 CLDN17P56750 224 aa13.57□□□□□ -0.24
CSNK1A1-202ENST00000377843 ARL6IP1Q15041 203 aa13.57□□□□□ -0.24
CSNK1A1-202ENST00000377843 ACTL10Q5JWF8 245 aa13.57□□□□□ -0.24
CSNK1A1-202ENST00000377843 THEM4Q5T1C6 240 aa13.57□□□□□ -0.24
CSNK1A1-202ENST00000377843 ANGPTL4Q9BY76 406 aa13.57□□□□□ -0.24
CSNK1A1-202ENST00000377843 RPRMQ9NS64 109 aa13.57□□□□□ -0.24
CSNK1A1-202ENST00000377843 NECAP2Q9NVZ3 263 aa13.57□□□□□ -0.24
CSNK1A1-202ENST00000377843 TRIOBPQ9H2D6 2365 aa13.57□□□□□ -0.24
CSNK1A1-202ENST00000377843 PPP5D1E7EU14 171 aa13.57□□□□□ -0.24
CSNK1A1-202ENST00000377843 HLA-HP01893 362 aa13.57□□□□□ -0.24
CSNK1A1-202ENST00000377843 FCGR2AP12318 317 aa13.57□□□□□ -0.24
CSNK1A1-202ENST00000377843 CCL1P22362 96 aa13.57□□□□□ -0.24
CSNK1A1-202ENST00000377843 TFPI2P48307 235 aa13.57□□□□□ -0.24
CSNK1A1-202ENST00000377843 IDH3GP51553 393 aaPredicted RBP13.57□□□□□ -0.24
CSNK1A1-202ENST00000377843 BIDP55957 195 aa13.57□□□□□ -0.24
CSNK1A1-202ENST00000377843 VAMP2P63027 116 aa13.57□□□□□ -0.24
CSNK1A1-202ENST00000377843 RPP30P78346 268 aaKnown RBP13.57□□□□□ -0.24
CSNK1A1-202ENST00000377843 PIGTQ969N2 578 aa13.57□□□□□ -0.24
CSNK1A1-202ENST00000377843 ADIPOR1Q96A54 375 aa13.57□□□□□ -0.24
CSNK1A1-202ENST00000377843 MUC3AQ02505 3323 aa13.56□□□□□ -0.24
CSNK1A1-202ENST00000377843 M0QZK8 103 aa13.56□□□□□ -0.24
CSNK1A1-202ENST00000377843 GGCTO75223 188 aaKnown RBP13.56□□□□□ -0.24
CSNK1A1-202ENST00000377843 LCATP04180 440 aa13.56□□□□□ -0.24
CSNK1A1-202ENST00000377843 CCKARP32238 428 aa13.56□□□□□ -0.24
CSNK1A1-202ENST00000377843 GALR1P47211 349 aa13.56□□□□□ -0.24
CSNK1A1-202ENST00000377843 TAS2R30P59541 319 aa13.56□□□□□ -0.24
CSNK1A1-202ENST00000377843 ZNF787Q6DD87 383 aa13.56□□□□□ -0.24
CSNK1A1-202ENST00000377843 ZNF100Q8IYN0 542 aa13.56□□□□□ -0.24
CSNK1A1-202ENST00000377843 TMEM256Q8N2U0 113 aa13.56□□□□□ -0.24
CSNK1A1-202ENST00000377843 IL22RA1Q8N6P7 574 aa13.56□□□□□ -0.24
CSNK1A1-202ENST00000377843 POC1BQ8TC44 478 aa13.56□□□□□ -0.24
CSNK1A1-202ENST00000377843 GPHA2Q96T91 129 aa13.56□□□□□ -0.24
CSNK1A1-202ENST00000377843 SHANK1Q9Y566 2161 aa13.56□□□□□ -0.24
CSNK1A1-202ENST00000377843 A0A1W2PPQ1 181 aa13.56□□□□□ -0.24
CSNK1A1-202ENST00000377843 TCF21O43680 179 aa13.56□□□□□ -0.24
CSNK1A1-202ENST00000377843 CNOT4O95628 575 aaKnown RBP13.56□□□□□ -0.24
CSNK1A1-202ENST00000377843 EXT1Q16394 746 aa13.56□□□□□ -0.24
CSNK1A1-202ENST00000377843 TGIF2LYQ8IUE0 185 aa13.56□□□□□ -0.24
CSNK1A1-202ENST00000377843 RSG1Q9BU20 258 aa13.56□□□□□ -0.24
CSNK1A1-202ENST00000377843 PNRC2Q9NPJ4 139 aaKnown RBP13.56□□□□□ -0.24
CSNK1A1-202ENST00000377843 PLA2G3Q9NZ20 509 aa13.56□□□□□ -0.24
CSNK1A1-202ENST00000377843 C2orf16Q68DN1 1984 aa13.55□□□□□ -0.24
CSNK1A1-202ENST00000377843 FRG2CA6NGY1 282 aa13.55□□□□□ -0.24
CSNK1A1-202ENST00000377843 TRDCB7Z8K6 153 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms