RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 GALNT14Q96FL9 552 aa17.3■□□□□ 0.36
VSX1-202ENST00000376709 AQP10Q96PS8 301 aa17.3■□□□□ 0.36
VSX1-202ENST00000376709 PLK3Q9H4B4 646 aa17.3■□□□□ 0.36
VSX1-202ENST00000376709 RCC2Q9P258 522 aaKnown RBP17.3■□□□□ 0.36
VSX1-202ENST00000376709 ESPL1Q14674 2120 aa17.3■□□□□ 0.36
VSX1-202ENST00000376709 LAMA5O15230 3695 aa17.3■□□□□ 0.36
VSX1-202ENST00000376709 TM4SF5O14894 197 aa17.3■□□□□ 0.36
VSX1-202ENST00000376709 WISP2O76076 250 aa17.3■□□□□ 0.36
VSX1-202ENST00000376709 CELA3BP08861 270 aa17.3■□□□□ 0.36
VSX1-202ENST00000376709 IGHV1-2P23083 117 aa17.3■□□□□ 0.36
VSX1-202ENST00000376709 IGFL2Q6UWQ7 119 aa17.3■□□□□ 0.36
VSX1-202ENST00000376709 FAM214BQ7L5A3 538 aa17.3■□□□□ 0.36
VSX1-202ENST00000376709 ZNF488Q96MN9 340 aa17.3■□□□□ 0.36
VSX1-202ENST00000376709 BARX1Q9HBU1 254 aaPredicted RBP17.3■□□□□ 0.36
VSX1-202ENST00000376709 GVINP1Q7Z2Y8 2422 aa17.29■□□□□ 0.36
VSX1-202ENST00000376709 B8ZZF3 427 aa17.29■□□□□ 0.36
VSX1-202ENST00000376709 PPYP01298 95 aa17.29■□□□□ 0.36
VSX1-202ENST00000376709 ZNF14P17017 642 aaPredicted RBP17.29■□□□□ 0.36
VSX1-202ENST00000376709 IDH3GP51553 393 aaPredicted RBP17.29■□□□□ 0.36
VSX1-202ENST00000376709 UCP3P55916 312 aa17.29■□□□□ 0.36
VSX1-202ENST00000376709 MYPOPQ86VE0 399 aaPredicted RBP17.29■□□□□ 0.36
VSX1-202ENST00000376709 CNEP1R1Q8N9A8 125 aa17.29■□□□□ 0.36
VSX1-202ENST00000376709 SUCNR1Q9BXA5 334 aa17.29■□□□□ 0.36
VSX1-202ENST00000376709 SHARPINQ9H0F6 387 aa17.29■□□□□ 0.36
VSX1-202ENST00000376709 DNAJB11Q9UBS4 358 aa17.29■□□□□ 0.36
VSX1-202ENST00000376709 NAPSAO96009 420 aa17.29■□□□□ 0.36
VSX1-202ENST00000376709 GLI4P10075 376 aa17.29■□□□□ 0.36
VSX1-202ENST00000376709 TMEM187Q14656 261 aa17.29■□□□□ 0.36
VSX1-202ENST00000376709 SMCO1Q147U7 214 aa17.29■□□□□ 0.36
VSX1-202ENST00000376709 CCDC71LQ8N9Z2 235 aa17.29■□□□□ 0.36
VSX1-202ENST00000376709 OR11L1Q8NGX0 322 aa17.29■□□□□ 0.36
VSX1-202ENST00000376709 LRFN3Q9BTN0 628 aa17.29■□□□□ 0.36
VSX1-202ENST00000376709 CDH20Q9HBT6 801 aa17.29■□□□□ 0.36
VSX1-202ENST00000376709 Q9N2K0 584 aa17.29■□□□□ 0.36
VSX1-202ENST00000376709 ZC4H2Q9NQZ6 224 aa17.29■□□□□ 0.36
VSX1-202ENST00000376709 KRBOX1C9JBD0 128 aa17.28■□□□□ 0.36
VSX1-202ENST00000376709 BET1O15155 118 aa17.28■□□□□ 0.36
VSX1-202ENST00000376709 TK1P04183 234 aa17.28■□□□□ 0.36
VSX1-202ENST00000376709 ZNF585AQ6P3V2 769 aa17.28■□□□□ 0.36
VSX1-202ENST00000376709 Q6ZS49 121 aa17.28■□□□□ 0.36
VSX1-202ENST00000376709 LINC00596Q86U02 117 aa17.28■□□□□ 0.36
VSX1-202ENST00000376709 BAP18Q8IXM2 172 aa17.28■□□□□ 0.36
VSX1-202ENST00000376709 CNTNAP3BQ96NU0 1288 aa17.28■□□□□ 0.36
VSX1-202ENST00000376709 CNTNAP3Q9BZ76 1288 aa17.28■□□□□ 0.36
VSX1-202ENST00000376709 SPACA1Q9HBV2 294 aa17.28■□□□□ 0.36
VSX1-202ENST00000376709 TUBD1Q9UJT1 453 aa17.28■□□□□ 0.36
VSX1-202ENST00000376709 LHX6Q9UPM6 363 aa17.28■□□□□ 0.36
VSX1-202ENST00000376709 ZNF891A8MT65 544 aaPredicted RBP17.28■□□□□ 0.36
VSX1-202ENST00000376709 J3QW42 95 aa17.28■□□□□ 0.36
VSX1-202ENST00000376709 NAAAQ02083 359 aa17.28■□□□□ 0.36
VSX1-202ENST00000376709 IL24Q13007 206 aa17.28■□□□□ 0.36
VSX1-202ENST00000376709 TSC22D1Q15714 1073 aa17.28■□□□□ 0.36
VSX1-202ENST00000376709 CCDC36Q8IYA8 594 aa17.28■□□□□ 0.36
VSX1-202ENST00000376709 EIF4E3Q8N5X7 224 aaKnown RBP17.28■□□□□ 0.36
VSX1-202ENST00000376709 RSRP1Q9BUV0 290 aa17.28■□□□□ 0.36
VSX1-202ENST00000376709 PLSCR2Q9NRY7 297 aa17.28■□□□□ 0.36
VSX1-202ENST00000376709 BOD1L1Q8NFC6 3051 aa17.27■□□□□ 0.36
VSX1-202ENST00000376709 SMPD2O60906 423 aa17.27■□□□□ 0.36
VSX1-202ENST00000376709 DIRAS3O95661 229 aa17.27■□□□□ 0.36
VSX1-202ENST00000376709 SCGB1D2O95969 90 aa17.27■□□□□ 0.36
VSX1-202ENST00000376709 PPP1CBP62140 327 aa17.27■□□□□ 0.36
VSX1-202ENST00000376709 SRSF7Q16629 238 aaKnown RBP eCLIP17.27■□□□□ 0.36
VSX1-202ENST00000376709 Q6ZT83 130 aa17.27■□□□□ 0.36
VSX1-202ENST00000376709 FAM58AQ8N1B3 248 aa17.27■□□□□ 0.36
VSX1-202ENST00000376709 STPG2Q8N412 459 aa17.27■□□□□ 0.36
VSX1-202ENST00000376709 SUMF2Q8NBJ7 301 aa17.27■□□□□ 0.36
VSX1-202ENST00000376709 OR2J1Q9GZK6 312 aa17.27■□□□□ 0.36
VSX1-202ENST00000376709 CYTL1Q9NRR1 136 aa17.27■□□□□ 0.36
VSX1-202ENST00000376709 CEP250Q9BV73 2442 aa17.27■□□□□ 0.36
VSX1-202ENST00000376709 KIR2DS1A0A191URI9 304 aa17.26■□□□□ 0.35
VSX1-202ENST00000376709 AQP7O14520 342 aa17.26■□□□□ 0.35
VSX1-202ENST00000376709 HS3ST1O14792 307 aa17.26■□□□□ 0.35
VSX1-202ENST00000376709 PHF1O43189 567 aaPredicted RBP17.26■□□□□ 0.35
VSX1-202ENST00000376709 SCTP09683 121 aa17.26■□□□□ 0.35
VSX1-202ENST00000376709 KIR2DS4P43632 304 aa17.26■□□□□ 0.35
VSX1-202ENST00000376709 KIR2DS1Q14954 304 aa17.26■□□□□ 0.35
VSX1-202ENST00000376709 FBXW12Q6X9E4 464 aa17.26■□□□□ 0.35
VSX1-202ENST00000376709 LIAT1Q6ZQX7 453 aa17.26■□□□□ 0.35
VSX1-202ENST00000376709 C17orf78Q8N4C9 275 aa17.26■□□□□ 0.35
VSX1-202ENST00000376709 PRRX2Q99811 253 aa17.26■□□□□ 0.35
VSX1-202ENST00000376709 RTL8AQ9BWD3 113 aa17.26■□□□□ 0.35
VSX1-202ENST00000376709 PKIBQ9C010 78 aa17.26■□□□□ 0.35
VSX1-202ENST00000376709 OR51I2Q9H344 312 aa17.26■□□□□ 0.35
VSX1-202ENST00000376709 TAS2R3Q9NYW6 316 aa17.26■□□□□ 0.35
VSX1-202ENST00000376709 LSM5Q9Y4Y9 91 aaKnown RBP17.26■□□□□ 0.35
VSX1-202ENST00000376709 RHBDL1O75783 438 aa17.26■□□□□ 0.35
VSX1-202ENST00000376709 LYZL2Q7Z4W2 148 aa17.26■□□□□ 0.35
VSX1-202ENST00000376709 LRTM2Q8N967 370 aa17.26■□□□□ 0.35
VSX1-202ENST00000376709 GLYATL2Q8WU03 294 aa17.26■□□□□ 0.35
VSX1-202ENST00000376709 SARAFQ96BY9 339 aa17.26■□□□□ 0.35
VSX1-202ENST00000376709 SLC5A7Q9GZV3 580 aa17.26■□□□□ 0.35
VSX1-202ENST00000376709 MS4A7Q9GZW8 240 aaPredicted RBP17.26■□□□□ 0.35
VSX1-202ENST00000376709 DNTTIP1Q9H147 329 aa17.26■□□□□ 0.35
VSX1-202ENST00000376709 OR2S2Q9NQN1 319 aa17.26■□□□□ 0.35
VSX1-202ENST00000376709 DEDDO75618 318 aa17.25■□□□□ 0.35
VSX1-202ENST00000376709 HOXC12P31275 282 aa17.25■□□□□ 0.35
VSX1-202ENST00000376709 C5orf24Q7Z6I8 188 aa17.25■□□□□ 0.35
VSX1-202ENST00000376709 LGI3Q8N145 548 aa17.25■□□□□ 0.35
VSX1-202ENST00000376709 RDH5Q92781 318 aa17.25■□□□□ 0.35
VSX1-202ENST00000376709 SPEF1Q9Y4P9 236 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms