RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 FUT3P21217 361 aa12.51□□□□□ -0.41
TNFRSF1B-201ENST00000376259 TBC1D26Q86UD7 250 aa12.51□□□□□ -0.41
TNFRSF1B-201ENST00000376259 OR10D4PQ8NGN7 298 aa12.51□□□□□ -0.41
TNFRSF1B-201ENST00000376259 RBMXL1Q96E39 390 aaKnown RBP12.51□□□□□ -0.41
TNFRSF1B-201ENST00000376259 THOC3Q96J01 351 aaKnown RBP12.51□□□□□ -0.41
TNFRSF1B-201ENST00000376259 CYTL1Q9NRR1 136 aa12.51□□□□□ -0.41
TNFRSF1B-201ENST00000376259 CHST1O43916 411 aa12.51□□□□□ -0.41
TNFRSF1B-201ENST00000376259 CTSDP07339 412 aaPredicted RBP12.51□□□□□ -0.41
TNFRSF1B-201ENST00000376259 ATP6V0CP27449 155 aa12.51□□□□□ -0.41
TNFRSF1B-201ENST00000376259 DYNLT3P51808 116 aa12.51□□□□□ -0.41
TNFRSF1B-201ENST00000376259 ARF1P84077 181 aaKnown RBP12.51□□□□□ -0.41
TNFRSF1B-201ENST00000376259 ZNF239Q16600 458 aaKnown RBP12.51□□□□□ -0.41
TNFRSF1B-201ENST00000376259 OR1J1Q8NGS3 322 aa12.51□□□□□ -0.41
TNFRSF1B-201ENST00000376259 FRZBQ92765 325 aa12.51□□□□□ -0.41
TNFRSF1B-201ENST00000376259 MARS2Q96GW9 593 aaKnown RBP12.51□□□□□ -0.41
TNFRSF1B-201ENST00000376259 SLC25A31Q9H0C2 315 aa12.51□□□□□ -0.41
TNFRSF1B-201ENST00000376259 AURKAIP1Q9NWT8 199 aaPredicted RBP12.51□□□□□ -0.41
TNFRSF1B-201ENST00000376259 DNAJB11Q9UBS4 358 aa12.51□□□□□ -0.41
TNFRSF1B-201ENST00000376259 VAMP5O95183 116 aa12.5□□□□□ -0.41
TNFRSF1B-201ENST00000376259 PPYP01298 95 aa12.5□□□□□ -0.41
TNFRSF1B-201ENST00000376259 CYB561P49447 251 aa12.5□□□□□ -0.41
TNFRSF1B-201ENST00000376259 OR2T2Q6IF00 324 aa12.5□□□□□ -0.41
TNFRSF1B-201ENST00000376259 SAT2Q96F10 170 aaPredicted RBP12.5□□□□□ -0.41
TNFRSF1B-201ENST00000376259 ANKRD30BLA7E2S9 258 aa12.5□□□□□ -0.41
TNFRSF1B-201ENST00000376259 GPR137BO60478 399 aa12.5□□□□□ -0.41
TNFRSF1B-201ENST00000376259 MELTFP08582 738 aa12.5□□□□□ -0.41
TNFRSF1B-201ENST00000376259 HNF1AP20823 631 aa12.5□□□□□ -0.41
TNFRSF1B-201ENST00000376259 SULT1A2P50226 295 aa12.5□□□□□ -0.41
TNFRSF1B-201ENST00000376259 WDR5BQ86VZ2 330 aa12.5□□□□□ -0.41
TNFRSF1B-201ENST00000376259 MRPL13Q9BYD1 178 aaKnown RBP12.5□□□□□ -0.41
TNFRSF1B-201ENST00000376259 DEFB127Q9H1M4 99 aa12.5□□□□□ -0.41
TNFRSF1B-201ENST00000376259 WSB1Q9Y6I7 421 aa12.5□□□□□ -0.41
TNFRSF1B-201ENST00000376259 MMP9P14780 707 aa12.5□□□□□ -0.41
TNFRSF1B-201ENST00000376259 CSRP1P21291 193 aaKnown RBP12.5□□□□□ -0.41
TNFRSF1B-201ENST00000376259 EWSR1Q01844 656 aaKnown RBP eCLIP12.5□□□□□ -0.41
TNFRSF1B-201ENST00000376259 NSUN5P2Q63ZY6 315 aa12.5□□□□□ -0.41
TNFRSF1B-201ENST00000376259 LIAT1Q6ZQX7 453 aa12.5□□□□□ -0.41
TNFRSF1B-201ENST00000376259 SSX9Q7RTT3 188 aa12.5□□□□□ -0.41
TNFRSF1B-201ENST00000376259 HPSE2Q8WWQ2 592 aa12.5□□□□□ -0.41
TNFRSF1B-201ENST00000376259 WBP1Q96G27 269 aa12.5□□□□□ -0.41
TNFRSF1B-201ENST00000376259 AQP10Q96PS8 301 aa12.5□□□□□ -0.41
TNFRSF1B-201ENST00000376259 SRXN1Q9BYN0 137 aa12.5□□□□□ -0.41
TNFRSF1B-201ENST00000376259 SLC35B3Q9H1N7 401 aa12.5□□□□□ -0.41
TNFRSF1B-201ENST00000376259 OSGIN2Q9Y236 505 aa12.5□□□□□ -0.41
TNFRSF1B-201ENST00000376259 DMDP11532 3685 aa12.5□□□□□ -0.41
TNFRSF1B-201ENST00000376259 A0A0G2JMM0 328 aa12.49□□□□□ -0.41
TNFRSF1B-201ENST00000376259 A0A1W2PPB8 328 aa12.49□□□□□ -0.41
TNFRSF1B-201ENST00000376259 A0A1W2PRS3 328 aa12.49□□□□□ -0.41
TNFRSF1B-201ENST00000376259 KIR3DP1A8MWS1 328 aa12.49□□□□□ -0.41
TNFRSF1B-201ENST00000376259 PDCD6O75340 191 aa12.49□□□□□ -0.41
TNFRSF1B-201ENST00000376259 DEDDO75618 318 aa12.49□□□□□ -0.41
TNFRSF1B-201ENST00000376259 RAB5AP20339 215 aa12.49□□□□□ -0.41
TNFRSF1B-201ENST00000376259 BCL3P20749 454 aa12.49□□□□□ -0.41
TNFRSF1B-201ENST00000376259 HOXA1P49639 335 aaPredicted RBP12.49□□□□□ -0.41
TNFRSF1B-201ENST00000376259 ZNF107Q9UII5 783 aaPredicted RBP12.49□□□□□ -0.41
TNFRSF1B-201ENST00000376259 A0A1W2PPE3 182 aa12.49□□□□□ -0.41
TNFRSF1B-201ENST00000376259 CBR3O75828 277 aa12.49□□□□□ -0.41
TNFRSF1B-201ENST00000376259 KRASP01116 189 aa12.49□□□□□ -0.41
TNFRSF1B-201ENST00000376259 RFPL3SP0C7P2 107 aa12.49□□□□□ -0.41
TNFRSF1B-201ENST00000376259 DSCR4P56555 118 aaPredicted RBP12.49□□□□□ -0.41
TNFRSF1B-201ENST00000376259 PSG4Q00888 419 aa12.49□□□□□ -0.41
TNFRSF1B-201ENST00000376259 RTL6Q6ICC9 239 aa12.49□□□□□ -0.41
TNFRSF1B-201ENST00000376259 SLC23A3Q6PIS1 610 aa12.49□□□□□ -0.41
TNFRSF1B-201ENST00000376259 ZNF429Q86V71 674 aa12.49□□□□□ -0.41
TNFRSF1B-201ENST00000376259 CNEP1R1Q8N9A8 125 aa12.49□□□□□ -0.41
TNFRSF1B-201ENST00000376259 RFESDQ8TAC1 157 aa12.49□□□□□ -0.41
TNFRSF1B-201ENST00000376259 HIST1H2BAQ96A08 127 aa12.49□□□□□ -0.41
TNFRSF1B-201ENST00000376259 TP53RKQ96S44 253 aa12.49□□□□□ -0.41
TNFRSF1B-201ENST00000376259 LINC00587B1AMM8 73 aa12.49□□□□□ -0.41
TNFRSF1B-201ENST00000376259 MT-ND4LP03901 98 aa12.49□□□□□ -0.41
TNFRSF1B-201ENST00000376259 SELEP16581 610 aa12.49□□□□□ -0.41
TNFRSF1B-201ENST00000376259 LRP11Q86VZ4 500 aa12.49□□□□□ -0.41
TNFRSF1B-201ENST00000376259 CALHM1Q8IU99 346 aa12.49□□□□□ -0.41
TNFRSF1B-201ENST00000376259 EIF4E3Q8N5X7 224 aaKnown RBP12.49□□□□□ -0.41
TNFRSF1B-201ENST00000376259 OR10J5Q8NHC4 309 aa12.49□□□□□ -0.41
TNFRSF1B-201ENST00000376259 BARX1Q9HBU1 254 aaPredicted RBP12.49□□□□□ -0.41
TNFRSF1B-201ENST00000376259 LAMTOR5O43504 91 aa12.48□□□□□ -0.41
TNFRSF1B-201ENST00000376259 FOSL2P15408 326 aa12.48□□□□□ -0.41
TNFRSF1B-201ENST00000376259 CA6P23280 308 aa12.48□□□□□ -0.41
TNFRSF1B-201ENST00000376259 ARG2P78540 354 aa12.48□□□□□ -0.41
TNFRSF1B-201ENST00000376259 NAAAQ02083 359 aa12.48□□□□□ -0.41
TNFRSF1B-201ENST00000376259 ENDOGQ14249 297 aaKnown RBP12.48□□□□□ -0.41
TNFRSF1B-201ENST00000376259 UBAC2Q8NBM4 344 aa12.48□□□□□ -0.41
TNFRSF1B-201ENST00000376259 MAFAQ8NHW3 353 aaPredicted RBP12.48□□□□□ -0.41
TNFRSF1B-201ENST00000376259 RSG1Q9BU20 258 aa12.48□□□□□ -0.41
TNFRSF1B-201ENST00000376259 HSF4Q9ULV5 492 aa12.48□□□□□ -0.41
TNFRSF1B-201ENST00000376259 BDP1A6H8Y1 2624 aa12.48□□□□□ -0.41
TNFRSF1B-201ENST00000376259 APLNRP35414 380 aa12.48□□□□□ -0.41
TNFRSF1B-201ENST00000376259 PCBD1P61457 104 aa12.48□□□□□ -0.41
TNFRSF1B-201ENST00000376259 EDDM3AQ14507 147 aa12.48□□□□□ -0.41
TNFRSF1B-201ENST00000376259 LHFPL2Q6ZUX7 228 aa12.48□□□□□ -0.41
TNFRSF1B-201ENST00000376259 CYB561D1Q8N8Q1 229 aa12.48□□□□□ -0.41
TNFRSF1B-201ENST00000376259 ZNF709Q8N972 641 aa12.48□□□□□ -0.41
TNFRSF1B-201ENST00000376259 CADM4Q8NFZ8 388 aa12.48□□□□□ -0.41
TNFRSF1B-201ENST00000376259 NINJ1Q92982 152 aa12.48□□□□□ -0.41
TNFRSF1B-201ENST00000376259 SPSB1Q96BD6 273 aa12.48□□□□□ -0.41
TNFRSF1B-201ENST00000376259 LOC390937A0A1W2PQ73 354 aa12.48□□□□□ -0.41
TNFRSF1B-201ENST00000376259 PPP1R2P9O14990 202 aa12.48□□□□□ -0.41
TNFRSF1B-201ENST00000376259 MPPED1O15442 326 aa12.48□□□□□ -0.41
TNFRSF1B-201ENST00000376259 RAB1AP62820 205 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms