RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 FREM1Q5H8C1 2179 aa12.08□□□□□ -0.48
MSH5-202ENST00000375740 IGKV1D-8A0A087WSZ0 117 aa12.07□□□□□ -0.48
MSH5-202ENST00000375740 CEACAM18A8MTB9 384 aa12.07□□□□□ -0.48
MSH5-202ENST00000375740 TAS2R46P59540 309 aa12.07□□□□□ -0.48
MSH5-202ENST00000375740 TRIP6Q15654 476 aaKnown RBP12.07□□□□□ -0.48
MSH5-202ENST00000375740 TAF9Q16594 264 aa12.07□□□□□ -0.48
MSH5-202ENST00000375740 TMEM128Q5BJH2 165 aa12.07□□□□□ -0.48
MSH5-202ENST00000375740 AADACL3Q5VUY0 350 aa12.07□□□□□ -0.48
MSH5-202ENST00000375740 LHFPL2Q6ZUX7 228 aa12.07□□□□□ -0.48
MSH5-202ENST00000375740 LHFPL1Q86WI0 220 aa12.07□□□□□ -0.48
MSH5-202ENST00000375740 ZNF100Q8IYN0 542 aa12.07□□□□□ -0.48
MSH5-202ENST00000375740 NAXEQ8NCW5 288 aa12.07□□□□□ -0.48
MSH5-202ENST00000375740 MDS2Q8NDY4 140 aa12.07□□□□□ -0.48
MSH5-202ENST00000375740 SAT2Q96F10 170 aaPredicted RBP12.07□□□□□ -0.48
MSH5-202ENST00000375740 HDHD3Q9BSH5 251 aaPredicted RBP12.07□□□□□ -0.48
MSH5-202ENST00000375740 FAAP24Q9BTP7 215 aa12.07□□□□□ -0.48
MSH5-202ENST00000375740 UFSP2Q9NUQ7 469 aa12.07□□□□□ -0.48
MSH5-202ENST00000375740 ZNF701Q9NV72 531 aaPredicted RBP12.07□□□□□ -0.48
MSH5-202ENST00000375740 ZNF581Q9P0T4 197 aa12.07□□□□□ -0.48
MSH5-202ENST00000375740 FIGNL2A6NMB9 653 aa12.07□□□□□ -0.48
MSH5-202ENST00000375740 NME2P1O60361 137 aa12.07□□□□□ -0.48
MSH5-202ENST00000375740 CA11O75493 328 aa12.07□□□□□ -0.48
MSH5-202ENST00000375740 DVL1P1P54792 670 aaPredicted RBP12.07□□□□□ -0.48
MSH5-202ENST00000375740 SLC9A3R2Q15599 337 aa12.07□□□□□ -0.48
MSH5-202ENST00000375740 CHRFAM7AQ494W8 412 aa12.07□□□□□ -0.48
MSH5-202ENST00000375740 ASCL4Q6XD76 172 aa12.07□□□□□ -0.48
MSH5-202ENST00000375740 Q6ZRG5 221 aa12.07□□□□□ -0.48
MSH5-202ENST00000375740 SSX9Q7RTT3 188 aa12.07□□□□□ -0.48
MSH5-202ENST00000375740 FOXRED2Q8IWF2 684 aa12.07□□□□□ -0.48
MSH5-202ENST00000375740 RTBDNQ9BSG5 229 aaPredicted RBP12.07□□□□□ -0.48
MSH5-202ENST00000375740 C1QTNF5Q9BXJ0 243 aa12.07□□□□□ -0.48
MSH5-202ENST00000375740 SLC5A7Q9GZV3 580 aa12.07□□□□□ -0.48
MSH5-202ENST00000375740 PRDM13Q9H4Q3 707 aa12.07□□□□□ -0.48
MSH5-202ENST00000375740 TAF9BQ9HBM6 251 aa12.07□□□□□ -0.48
MSH5-202ENST00000375740 OSGIN2Q9Y236 505 aa12.07□□□□□ -0.48
MSH5-202ENST00000375740 KLF13Q9Y2Y9 288 aaPredicted RBP12.07□□□□□ -0.48
MSH5-202ENST00000375740 PCNX2A6NKB5 2137 aa12.07□□□□□ -0.48
MSH5-202ENST00000375740 IGKV1-12A0A0C4DH73 117 aa12.06□□□□□ -0.48
MSH5-202ENST00000375740 KLRC4-KLRK1H3BQV0 150 aa12.06□□□□□ -0.48
MSH5-202ENST00000375740 IGKV1D-12P01611 117 aa12.06□□□□□ -0.48
MSH5-202ENST00000375740 HLA-HP01893 362 aa12.06□□□□□ -0.48
MSH5-202ENST00000375740 RAB32Q13637 225 aa12.06□□□□□ -0.48
MSH5-202ENST00000375740 PPA1Q15181 289 aa12.06□□□□□ -0.48
MSH5-202ENST00000375740 OR10C1Q96KK4 312 aa12.06□□□□□ -0.48
MSH5-202ENST00000375740 SPACA1Q9HBV2 294 aa12.06□□□□□ -0.48
MSH5-202ENST00000375740 RPL36A-HNRNPH2H7BZ11 118 aa12.06□□□□□ -0.48
MSH5-202ENST00000375740 XRCC2O43543 280 aa12.06□□□□□ -0.48
MSH5-202ENST00000375740 IFNA2P01563 188 aa12.06□□□□□ -0.48
MSH5-202ENST00000375740 CCNOP22674 350 aa12.06□□□□□ -0.48
MSH5-202ENST00000375740 FPR2P25090 351 aa12.06□□□□□ -0.48
MSH5-202ENST00000375740 SULT1A1P50225 295 aa12.06□□□□□ -0.48
MSH5-202ENST00000375740 FUT6P51993 359 aa12.06□□□□□ -0.48
MSH5-202ENST00000375740 OR8B8Q15620 311 aa12.06□□□□□ -0.48
MSH5-202ENST00000375740 RTL6Q6ICC9 239 aa12.06□□□□□ -0.48
MSH5-202ENST00000375740 RPUSD3Q6P087 351 aaKnown RBP12.06□□□□□ -0.48
MSH5-202ENST00000375740 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.06□□□□□ -0.48
MSH5-202ENST00000375740 PEG10Q86TG7 708 aaKnown RBP12.06□□□□□ -0.48
MSH5-202ENST00000375740 EMG1Q92979 244 aaKnown RBP12.06□□□□□ -0.48
MSH5-202ENST00000375740 NMES1Q9C002 83 aa12.06□□□□□ -0.48
MSH5-202ENST00000375740 PRDM14Q9GZV8 571 aa12.06□□□□□ -0.48
MSH5-202ENST00000375740 ZNF407Q9C0G0 2248 aa12.06□□□□□ -0.48
MSH5-202ENST00000375740 ARGFXA6NJG6 315 aa12.05□□□□□ -0.48
MSH5-202ENST00000375740 H7C1Q1 480 aa12.05□□□□□ -0.48
MSH5-202ENST00000375740 CCL2P13500 99 aa12.05□□□□□ -0.48
MSH5-202ENST00000375740 GLRA1P23415 457 aa12.05□□□□□ -0.48
MSH5-202ENST00000375740 PMELP40967 661 aa12.05□□□□□ -0.48
MSH5-202ENST00000375740 SLC10A1Q14973 349 aa12.05□□□□□ -0.48
MSH5-202ENST00000375740 PLCXD3Q63HM9 321 aa12.05□□□□□ -0.48
MSH5-202ENST00000375740 OR2A2Q6IF42 318 aa12.05□□□□□ -0.48
MSH5-202ENST00000375740 CLEC18BQ6UXF7 455 aa12.05□□□□□ -0.48
MSH5-202ENST00000375740 COLCA1Q6ZS62 124 aa12.05□□□□□ -0.48
MSH5-202ENST00000375740 SPSB4Q96A44 273 aa12.05□□□□□ -0.48
MSH5-202ENST00000375740 SCGB3A2Q96PL1 93 aa12.05□□□□□ -0.48
MSH5-202ENST00000375740 DEFB127Q9H1M4 99 aa12.05□□□□□ -0.48
MSH5-202ENST00000375740 BCO1Q9HAY6 547 aa12.05□□□□□ -0.48
MSH5-202ENST00000375740 SLC7A11Q9UPY5 501 aa12.05□□□□□ -0.48
MSH5-202ENST00000375740 LIPGQ9Y5X9 500 aa12.05□□□□□ -0.48
MSH5-202ENST00000375740 ZNF816-ZNF321PA0A0X1KG74 233 aa12.05□□□□□ -0.48
MSH5-202ENST00000375740 ZNF724A8MTY0 619 aa12.05□□□□□ -0.48
MSH5-202ENST00000375740 MSTNO14793 375 aa12.05□□□□□ -0.48
MSH5-202ENST00000375740 SFT2D2O95562 160 aa12.05□□□□□ -0.48
MSH5-202ENST00000375740 HOXB5P09067 269 aa12.05□□□□□ -0.48
MSH5-202ENST00000375740 HOXA5P20719 270 aa12.05□□□□□ -0.48
MSH5-202ENST00000375740 APH1AQ96BI3 265 aa12.05□□□□□ -0.48
MSH5-202ENST00000375740 KPTNQ9Y664 436 aa12.05□□□□□ -0.48
MSH5-202ENST00000375740 MED19A0JLT2 244 aaPredicted RBP12.04□□□□□ -0.48
MSH5-202ENST00000375740 ZNF503-AS2A6NEH8 195 aa12.04□□□□□ -0.48
MSH5-202ENST00000375740 CD46P15529 392 aa12.04□□□□□ -0.48
MSH5-202ENST00000375740 RRADP55042 308 aa12.04□□□□□ -0.48
MSH5-202ENST00000375740 SUPT4H1P63272 117 aaKnown RBP12.04□□□□□ -0.48
MSH5-202ENST00000375740 BRICD5Q6PL45 260 aa12.04□□□□□ -0.48
MSH5-202ENST00000375740 CLEC9AQ6UXN8 241 aa12.04□□□□□ -0.48
MSH5-202ENST00000375740 NUFIP2Q7Z417 695 aaKnown RBP12.04□□□□□ -0.48
MSH5-202ENST00000375740 SCRT1Q9BWW7 348 aa12.04□□□□□ -0.48
MSH5-202ENST00000375740 GSKIPQ9P0R6 139 aa12.04□□□□□ -0.48
MSH5-202ENST00000375740 AK3Q9UIJ7 227 aa12.04□□□□□ -0.48
MSH5-202ENST00000375740 ZNF850A8MQ14 1090 aa12.04□□□□□ -0.48
MSH5-202ENST00000375740 GEMIN2O14893 280 aaKnown RBP12.04□□□□□ -0.48
MSH5-202ENST00000375740 FHITP49789 147 aa12.04□□□□□ -0.48
MSH5-202ENST00000375740 SULT1A2P50226 295 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms