RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 DUX4L3P0CJ86 424 aa9.96□□□□□ -0.82
LSM2-208ENST00000375661 DUX4L4P0CJ87 422 aa9.96□□□□□ -0.82
LSM2-208ENST00000375661 DUX4L5P0CJ88 424 aa9.96□□□□□ -0.82
LSM2-208ENST00000375661 DUX4L6P0CJ89 424 aa9.96□□□□□ -0.82
LSM2-208ENST00000375661 DUX4L7P0CJ90 424 aa9.96□□□□□ -0.82
LSM2-208ENST00000375661 PSG2P11465 335 aa9.96□□□□□ -0.82
LSM2-208ENST00000375661 PTGFRP43088 359 aa9.96□□□□□ -0.82
LSM2-208ENST00000375661 ALDH3B2P48448 385 aa9.96□□□□□ -0.82
LSM2-208ENST00000375661 BEAN1Q3B7T3 259 aa9.96□□□□□ -0.82
LSM2-208ENST00000375661 DHRS7BQ6IAN0 325 aaPredicted RBP9.96□□□□□ -0.82
LSM2-208ENST00000375661 C22orf42Q6IC83 251 aa9.96□□□□□ -0.82
LSM2-208ENST00000375661 DUX4L9Q6RFH8 374 aaPredicted RBP9.96□□□□□ -0.82
LSM2-208ENST00000375661 ZNF788Q6ZQV5 615 aa9.96□□□□□ -0.82
LSM2-208ENST00000375661 Q6ZSV7 163 aa9.96□□□□□ -0.82
LSM2-208ENST00000375661 NKAIN3Q8N8D7 197 aa9.96□□□□□ -0.82
LSM2-208ENST00000375661 OR4D6Q8NGJ1 314 aa9.96□□□□□ -0.82
LSM2-208ENST00000375661 OR13F1Q8NGS4 319 aa9.96□□□□□ -0.82
LSM2-208ENST00000375661 CPNE2Q96FN4 548 aaPredicted RBP9.96□□□□□ -0.82
LSM2-208ENST00000375661 CCL13Q99616 98 aa9.96□□□□□ -0.82
LSM2-208ENST00000375661 CHCHD6Q9BRQ6 235 aa9.96□□□□□ -0.82
LSM2-208ENST00000375661 RNF167Q9H6Y7 350 aa9.96□□□□□ -0.82
LSM2-208ENST00000375661 CNTD2Q9H8S5 307 aa9.96□□□□□ -0.82
LSM2-208ENST00000375661 SMURF1Q9HCE7 757 aa9.96□□□□□ -0.82
LSM2-208ENST00000375661 EXOSC4Q9NPD3 245 aaKnown RBP9.96□□□□□ -0.82
LSM2-208ENST00000375661 RBFOX1Q9NWB1 397 aaKnown RBP9.96□□□□□ -0.82
LSM2-208ENST00000375661 IL36RNQ9UBH0 155 aa9.96□□□□□ -0.82
LSM2-208ENST00000375661 KAAG1Q9UBP8 84 aa9.96□□□□□ -0.82
LSM2-208ENST00000375661 DNAJB11Q9UBS4 358 aa9.96□□□□□ -0.82
LSM2-208ENST00000375661 DUX4Q9UBX2 424 aa9.96□□□□□ -0.82
LSM2-208ENST00000375661 AK6Q9Y3D8 172 aaKnown RBP9.96□□□□□ -0.82
LSM2-208ENST00000375661 KPTNQ9Y664 436 aa9.96□□□□□ -0.82
LSM2-208ENST00000375661 TRAV1-2A0A0B4J238 106 aa9.95□□□□□ -0.82
LSM2-208ENST00000375661 RFPL4AA6NLU0 287 aa9.95□□□□□ -0.82
LSM2-208ENST00000375661 OR2AT4A6NND4 320 aa9.95□□□□□ -0.82
LSM2-208ENST00000375661 RFPL4AL1F8VTS6 287 aa9.95□□□□□ -0.82
LSM2-208ENST00000375661 CDRT1O95170 752 aa9.95□□□□□ -0.82
LSM2-208ENST00000375661 FBP1P09467 338 aa9.95□□□□□ -0.82
LSM2-208ENST00000375661 CALCBP10092 127 aa9.95□□□□□ -0.82
LSM2-208ENST00000375661 CEBPDP49716 269 aaPredicted RBP9.95□□□□□ -0.82
LSM2-208ENST00000375661 SMIM21Q3B7S5 101 aa9.95□□□□□ -0.82
LSM2-208ENST00000375661 C1orf100Q5SVJ3 147 aa9.95□□□□□ -0.82
LSM2-208ENST00000375661 GLT8D1Q68CQ7 371 aa9.95□□□□□ -0.82
LSM2-208ENST00000375661 METAP1DQ6UB28 335 aaPredicted RBP9.95□□□□□ -0.82
LSM2-208ENST00000375661 Q8IYB0 196 aa9.95□□□□□ -0.82
LSM2-208ENST00000375661 FAM58AQ8N1B3 248 aa9.95□□□□□ -0.82
LSM2-208ENST00000375661 JAGN1Q8N5M9 183 aa9.95□□□□□ -0.82
LSM2-208ENST00000375661 CD177Q8N6Q3 437 aa9.95□□□□□ -0.82
LSM2-208ENST00000375661 FAM216BQ8N7L0 139 aa9.95□□□□□ -0.82
LSM2-208ENST00000375661 Q8NFD4 153 aa9.95□□□□□ -0.82
LSM2-208ENST00000375661 OR10K1Q8NGX5 313 aa9.95□□□□□ -0.82
LSM2-208ENST00000375661 EMG1Q92979 244 aaKnown RBP9.95□□□□□ -0.82
LSM2-208ENST00000375661 GAFA1Q96PS6 74 aa9.95□□□□□ -0.82
LSM2-208ENST00000375661 FAM192AQ9GZU8 254 aa9.95□□□□□ -0.82
LSM2-208ENST00000375661 HMG20AQ9NP66 347 aa9.95□□□□□ -0.82
LSM2-208ENST00000375661 VPREB3Q9UKI3 123 aa9.95□□□□□ -0.82
LSM2-208ENST00000375661 SSR3Q9UNL2 185 aa9.95□□□□□ -0.82
LSM2-208ENST00000375661 ING4Q9UNL4 249 aa9.95□□□□□ -0.82
LSM2-208ENST00000375661 FAM96BQ9Y3D0 163 aa9.95□□□□□ -0.82
LSM2-208ENST00000375661 MAB21L2Q9Y586 359 aa9.95□□□□□ -0.82
LSM2-208ENST00000375661 A0A1W2PP11 408 aa9.94□□□□□ -0.82
LSM2-208ENST00000375661 OPN1MWP04001 364 aa9.94□□□□□ -0.82
LSM2-208ENST00000375661 OPN1MW2P0DN77 364 aa9.94□□□□□ -0.82
LSM2-208ENST00000375661 OPN1MW3P0DN78 364 aa9.94□□□□□ -0.82
LSM2-208ENST00000375661 SELLP14151 372 aa9.94□□□□□ -0.82
LSM2-208ENST00000375661 PRDX2P32119 198 aa9.94□□□□□ -0.82
LSM2-208ENST00000375661 GABRA2P47869 451 aa9.94□□□□□ -0.82
LSM2-208ENST00000375661 GUCA2AQ02747 115 aa9.94□□□□□ -0.82
LSM2-208ENST00000375661 DGUOKQ16854 277 aa9.94□□□□□ -0.82
LSM2-208ENST00000375661 ELP2Q6IA86 826 aa9.94□□□□□ -0.82
LSM2-208ENST00000375661 C11orf88Q6PI97 169 aa9.94□□□□□ -0.82
LSM2-208ENST00000375661 GLIPR1L1Q6UWM5 242 aa9.94□□□□□ -0.82
LSM2-208ENST00000375661 FGFRL1Q8N441 504 aa9.94□□□□□ -0.82
LSM2-208ENST00000375661 FOXRED1Q96CU9 486 aaPredicted RBP9.94□□□□□ -0.82
LSM2-208ENST00000375661 SDSLQ96GA7 329 aa9.94□□□□□ -0.82
LSM2-208ENST00000375661 UQCC2Q9BRT2 126 aa9.94□□□□□ -0.82
LSM2-208ENST00000375661 CENPOQ9BU64 300 aa9.94□□□□□ -0.82
LSM2-208ENST00000375661 DNTTIP1Q9H147 329 aa9.94□□□□□ -0.82
LSM2-208ENST00000375661 RHOFQ9HBH0 211 aa9.94□□□□□ -0.82
LSM2-208ENST00000375661 IL36GQ9NZH8 169 aa9.94□□□□□ -0.82
LSM2-208ENST00000375661 ZNRD1Q9P1U0 126 aa9.94□□□□□ -0.82
LSM2-208ENST00000375661 MRPS28Q9Y2Q9 187 aaKnown RBP9.94□□□□□ -0.82
LSM2-208ENST00000375661 LOC100506127A0A0U1RQW1 187 aa9.93□□□□□ -0.82
LSM2-208ENST00000375661 G3V4G9 280 aa9.93□□□□□ -0.82
LSM2-208ENST00000375661 SLC22A1O15245 554 aa9.93□□□□□ -0.82
LSM2-208ENST00000375661 SIGLEC5O15389 551 aa9.93□□□□□ -0.82
LSM2-208ENST00000375661 HTR3BO95264 441 aa9.93□□□□□ -0.82
LSM2-208ENST00000375661 PRKACAP17612 351 aa9.93□□□□□ -0.82
LSM2-208ENST00000375661 DUSP1P28562 367 aa9.93□□□□□ -0.82
LSM2-208ENST00000375661 TGFBR1P36897 503 aa9.93□□□□□ -0.82
LSM2-208ENST00000375661 MTNR1BP49286 362 aa9.93□□□□□ -0.82
LSM2-208ENST00000375661 SNU13P55769 128 aaKnown RBP9.93□□□□□ -0.82
LSM2-208ENST00000375661 ARF6P62330 175 aa9.93□□□□□ -0.82
LSM2-208ENST00000375661 HERPUD1Q15011 391 aa9.93□□□□□ -0.82
LSM2-208ENST00000375661 ZNF146Q15072 292 aa9.93□□□□□ -0.82
LSM2-208ENST00000375661 SAMD5Q5TGI4 173 aa9.93□□□□□ -0.82
LSM2-208ENST00000375661 AWAT2Q6E213 333 aa9.93□□□□□ -0.82
LSM2-208ENST00000375661 Q6ZTK2 550 aa9.93□□□□□ -0.82
LSM2-208ENST00000375661 BTN2A1Q7KYR7 527 aa9.93□□□□□ -0.82
LSM2-208ENST00000375661 SLC36A1Q7Z2H8 476 aa9.93□□□□□ -0.82
LSM2-208ENST00000375661 NR2C2APQ86WQ0 139 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms