RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 CHST11Q9NPF2 352 aa10.6□□□□□ -0.71
C9orf3-203ENST00000375315 NAGKQ9UJ70 344 aa10.6□□□□□ -0.71
C9orf3-203ENST00000375315 RHBDD3Q9Y3P4 386 aa10.6□□□□□ -0.71
C9orf3-203ENST00000375315 IL6RP08887 468 aaPredicted RBP10.6□□□□□ -0.71
C9orf3-203ENST00000375315 IL12BP29460 328 aa10.6□□□□□ -0.71
C9orf3-203ENST00000375315 CDKN1BP46527 198 aa10.6□□□□□ -0.71
C9orf3-203ENST00000375315 CSNK2A1P68400 391 aaPredicted RBP10.6□□□□□ -0.71
C9orf3-203ENST00000375315 QRFPP83859 136 aa10.6□□□□□ -0.71
C9orf3-203ENST00000375315 SQSTM1Q13501 440 aa10.6□□□□□ -0.71
C9orf3-203ENST00000375315 CD226Q15762 336 aa10.6□□□□□ -0.71
C9orf3-203ENST00000375315 BATFQ16520 125 aa10.6□□□□□ -0.71
C9orf3-203ENST00000375315 CSNK2A3Q8NEV1 391 aa10.6□□□□□ -0.71
C9orf3-203ENST00000375315 RTN4RQ9BZR6 473 aa10.6□□□□□ -0.71
C9orf3-203ENST00000375315 P4HTMQ9NXG6 502 aa10.6□□□□□ -0.71
C9orf3-203ENST00000375315 HSF4Q9ULV5 492 aa10.6□□□□□ -0.71
C9orf3-203ENST00000375315 ZNF705FA8MVS1 300 aaPredicted RBP10.59□□□□□ -0.71
C9orf3-203ENST00000375315 SDCBPO00560 298 aaPredicted RBP10.59□□□□□ -0.71
C9orf3-203ENST00000375315 XRCC2O43543 280 aa10.59□□□□□ -0.71
C9orf3-203ENST00000375315 JMJD7P0C870 316 aa10.59□□□□□ -0.71
C9orf3-203ENST00000375315 ZNF705DP0CH99 300 aaPredicted RBP10.59□□□□□ -0.71
C9orf3-203ENST00000375315 ZNF705BP0CI00 300 aaPredicted RBP10.59□□□□□ -0.71
C9orf3-203ENST00000375315 HIST1H1DP16402 221 aaKnown RBP10.59□□□□□ -0.71
C9orf3-203ENST00000375315 SELEP16581 610 aa10.59□□□□□ -0.71
C9orf3-203ENST00000375315 IDH3GP51553 393 aaPredicted RBP10.59□□□□□ -0.71
C9orf3-203ENST00000375315 HSF1Q00613 529 aa10.59□□□□□ -0.71
C9orf3-203ENST00000375315 PLCXD2Q0VAA5 305 aa10.59□□□□□ -0.71
C9orf3-203ENST00000375315 IL13RA2Q14627 380 aa10.59□□□□□ -0.71
C9orf3-203ENST00000375315 ZNF74Q16587 644 aa10.59□□□□□ -0.71
C9orf3-203ENST00000375315 RIPPLY2Q5TAB7 128 aa10.59□□□□□ -0.71
C9orf3-203ENST00000375315 LEMD1Q68G75 181 aa10.59□□□□□ -0.71
C9orf3-203ENST00000375315 C11orf42Q8N5U0 333 aa10.59□□□□□ -0.71
C9orf3-203ENST00000375315 DAZLQ92904 295 aaKnown RBP10.59□□□□□ -0.71
C9orf3-203ENST00000375315 EXTL1Q92935 676 aa10.59□□□□□ -0.71
C9orf3-203ENST00000375315 TSPAN32Q96QS1 320 aa10.59□□□□□ -0.71
C9orf3-203ENST00000375315 C20orf202A1L168 122 aa10.59□□□□□ -0.71
C9orf3-203ENST00000375315 G3V3Y1 287 aa10.59□□□□□ -0.71
C9orf3-203ENST00000375315 CDX4O14627 284 aaPredicted RBP10.59□□□□□ -0.71
C9orf3-203ENST00000375315 HCRTR2O43614 444 aa10.59□□□□□ -0.71
C9orf3-203ENST00000375315 DDAH2O95865 285 aa10.59□□□□□ -0.71
C9orf3-203ENST00000375315 ECI1P42126 302 aa10.59□□□□□ -0.71
C9orf3-203ENST00000375315 ELLP55199 621 aaPredicted RBP10.59□□□□□ -0.71
C9orf3-203ENST00000375315 RAB11AP62491 216 aa10.59□□□□□ -0.71
C9orf3-203ENST00000375315 P2RY6Q15077 328 aa10.59□□□□□ -0.71
C9orf3-203ENST00000375315 OTPQ5XKR4 325 aa10.59□□□□□ -0.71
C9orf3-203ENST00000375315 SULF2Q8IWU5 870 aa10.59□□□□□ -0.71
C9orf3-203ENST00000375315 RNASE8Q8TDE3 154 aaKnown RBP10.59□□□□□ -0.71
C9orf3-203ENST00000375315 MIEN1Q9BRT3 115 aa10.59□□□□□ -0.71
C9orf3-203ENST00000375315 OR2J1Q9GZK6 312 aa10.59□□□□□ -0.71
C9orf3-203ENST00000375315 SLC5A6Q9Y289 635 aa10.59□□□□□ -0.71
C9orf3-203ENST00000375315 LRP12Q9Y561 859 aa10.59□□□□□ -0.71
C9orf3-203ENST00000375315 CFAP47Q6ZTR5 3102 aa10.59□□□□□ -0.71
C9orf3-203ENST00000375315 TRBV11-1A0A0K0K1C0 115 aa10.58□□□□□ -0.72
C9orf3-203ENST00000375315 ATP6V0CP27449 155 aa10.58□□□□□ -0.72
C9orf3-203ENST00000375315 FUT7Q11130 342 aa10.58□□□□□ -0.72
C9orf3-203ENST00000375315 FOXF1Q12946 379 aa10.58□□□□□ -0.72
C9orf3-203ENST00000375315 RTN4RL2Q86UN3 420 aa10.58□□□□□ -0.72
C9orf3-203ENST00000375315 ZNF100Q8IYN0 542 aa10.58□□□□□ -0.72
C9orf3-203ENST00000375315 OR5L2Q8NGL0 311 aa10.58□□□□□ -0.72
C9orf3-203ENST00000375315 OR14L1PQ8NHC6 308 aa10.58□□□□□ -0.72
C9orf3-203ENST00000375315 CLDND2Q8NHS1 167 aa10.58□□□□□ -0.72
C9orf3-203ENST00000375315 GPR119Q8TDV5 335 aa10.58□□□□□ -0.72
C9orf3-203ENST00000375315 ZNF721Q8TF20 911 aa10.58□□□□□ -0.72
C9orf3-203ENST00000375315 NICN1Q9BSH3 213 aa10.58□□□□□ -0.72
C9orf3-203ENST00000375315 ABHD14AQ9BUJ0 271 aa10.58□□□□□ -0.72
C9orf3-203ENST00000375315 FBLN5Q9UBX5 448 aa10.58□□□□□ -0.72
C9orf3-203ENST00000375315 EMC9Q9Y3B6 208 aa10.58□□□□□ -0.72
C9orf3-203ENST00000375315 R4GMQ9 66 aa10.58□□□□□ -0.72
C9orf3-203ENST00000375315 TMEM14DPA8MWL7 114 aa10.58□□□□□ -0.72
C9orf3-203ENST00000375315 DIRAS3O95661 229 aa10.58□□□□□ -0.72
C9orf3-203ENST00000375315 OTX2P32243 289 aa10.58□□□□□ -0.72
C9orf3-203ENST00000375315 TNFSF10P50591 281 aa10.58□□□□□ -0.72
C9orf3-203ENST00000375315 RPL18Q07020 188 aaKnown RBP10.58□□□□□ -0.72
C9orf3-203ENST00000375315 C1orf140Q5VVS0 124 aa10.58□□□□□ -0.72
C9orf3-203ENST00000375315 TGIF2LYQ8IUE0 185 aa10.58□□□□□ -0.72
C9orf3-203ENST00000375315 OR1N1Q8NGS0 311 aa10.58□□□□□ -0.72
C9orf3-203ENST00000375315 TMEM170AQ8WVE7 144 aa10.58□□□□□ -0.72
C9orf3-203ENST00000375315 ST6GALNAC5Q9BVH7 336 aa10.58□□□□□ -0.72
C9orf3-203ENST00000375315 LAMP3Q9UQV4 416 aa10.58□□□□□ -0.72
C9orf3-203ENST00000375315 PCNX3Q9H6A9 2034 aa10.58□□□□□ -0.72
C9orf3-203ENST00000375315 UTS2O95399 124 aa10.58□□□□□ -0.72
C9orf3-203ENST00000375315 LCATP04180 440 aa10.58□□□□□ -0.72
C9orf3-203ENST00000375315 ISG15P05161 165 aa10.58□□□□□ -0.72
C9orf3-203ENST00000375315 TMEM11P17152 192 aa10.58□□□□□ -0.72
C9orf3-203ENST00000375315 TUBG1P23258 451 aa10.58□□□□□ -0.72
C9orf3-203ENST00000375315 CSNK1A1P48729 337 aa10.58□□□□□ -0.72
C9orf3-203ENST00000375315 SOX8P57073 446 aa10.58□□□□□ -0.72
C9orf3-203ENST00000375315 ACOT6Q3I5F7 207 aaPredicted RBP10.58□□□□□ -0.72
C9orf3-203ENST00000375315 P4HA3Q7Z4N8 544 aa10.58□□□□□ -0.72
C9orf3-203ENST00000375315 KMT5CQ86Y97 462 aa10.58□□□□□ -0.72
C9orf3-203ENST00000375315 LIPHQ8WWY8 451 aa10.58□□□□□ -0.72
C9orf3-203ENST00000375315 LPAR5Q9H1C0 372 aa10.58□□□□□ -0.72
C9orf3-203ENST00000375315 GPR84Q9NQS5 396 aa10.58□□□□□ -0.72
C9orf3-203ENST00000375315 LOXL2Q9Y4K0 774 aa10.58□□□□□ -0.72
C9orf3-203ENST00000375315 MPDZO75970 2070 aa10.57□□□□□ -0.72
C9orf3-203ENST00000375315 ZNF318Q5VUA4 2279 aa10.57□□□□□ -0.72
C9orf3-203ENST00000375315 IGKV1D-42A0A075B6H8 117 aa10.57□□□□□ -0.72
C9orf3-203ENST00000375315 SCDO00767 359 aa10.57□□□□□ -0.72
C9orf3-203ENST00000375315 ATXN7O15265 892 aaPredicted RBP10.57□□□□□ -0.72
C9orf3-203ENST00000375315 WISP1O95388 367 aa10.57□□□□□ -0.72
C9orf3-203ENST00000375315 MPIG6BO95866 241 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms