RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 OR2M7Q8NG81 312 aa12.02□□□□□ -0.49
HMGCL-203ENST00000374490 OR4A4PQ8NGN8 299 aa12.02□□□□□ -0.49
HMGCL-203ENST00000374490 ARV1Q9H2C2 271 aa12.02□□□□□ -0.49
HMGCL-203ENST00000374490 LIME1Q9H400 295 aa12.02□□□□□ -0.49
HMGCL-203ENST00000374490 ZNF442Q9H7R0 627 aa12.02□□□□□ -0.49
HMGCL-203ENST00000374490 ZNF703Q9H7S9 590 aaPredicted RBP12.02□□□□□ -0.49
HMGCL-203ENST00000374490 RHOFQ9HBH0 211 aa12.02□□□□□ -0.49
HMGCL-203ENST00000374490 SLC2A9Q9NRM0 540 aa12.02□□□□□ -0.49
HMGCL-203ENST00000374490 UQCC1Q9NVA1 299 aa12.02□□□□□ -0.49
HMGCL-203ENST00000374490 AMDHD2Q9Y303 409 aa12.02□□□□□ -0.49
HMGCL-203ENST00000374490 TMED3Q9Y3Q3 217 aa12.02□□□□□ -0.49
HMGCL-203ENST00000374490 LOC400499M0QZD8 3231 aa12.02□□□□□ -0.49
HMGCL-203ENST00000374490 KNTC1P50748 2209 aa12.02□□□□□ -0.49
HMGCL-203ENST00000374490 PQLC2LA1A4F0 135 aa12.01□□□□□ -0.49
HMGCL-203ENST00000374490 ZNF724A8MTY0 619 aa12.01□□□□□ -0.49
HMGCL-203ENST00000374490 ATP6V1G2-DDX39BF2Z307 99 aa12.01□□□□□ -0.49
HMGCL-203ENST00000374490 NUPL2O15504 423 aaKnown RBP12.01□□□□□ -0.49
HMGCL-203ENST00000374490 TSPAN9O75954 239 aa12.01□□□□□ -0.49
HMGCL-203ENST00000374490 DIRAS3O95661 229 aa12.01□□□□□ -0.49
HMGCL-203ENST00000374490 ADCYAP1P18509 176 aa12.01□□□□□ -0.49
HMGCL-203ENST00000374490 FXYD4P59646 89 aa12.01□□□□□ -0.49
HMGCL-203ENST00000374490 ARF1P84077 181 aaKnown RBP12.01□□□□□ -0.49
HMGCL-203ENST00000374490 SWI5Q1ZZU3 235 aa12.01□□□□□ -0.49
HMGCL-203ENST00000374490 MPV17LQ2QL34 196 aa12.01□□□□□ -0.49
HMGCL-203ENST00000374490 HAGHLQ6PII5 290 aaPredicted RBP12.01□□□□□ -0.49
HMGCL-203ENST00000374490 BTNL8Q6UX41 500 aa12.01□□□□□ -0.49
HMGCL-203ENST00000374490 SPACA3Q8IXA5 215 aa12.01□□□□□ -0.49
HMGCL-203ENST00000374490 APOBEC3DQ96AK3 386 aaPredicted RBP12.01□□□□□ -0.49
HMGCL-203ENST00000374490 ZNF845Q96IR2 970 aaPredicted RBP12.01□□□□□ -0.49
HMGCL-203ENST00000374490 ABHD14BQ96IU4 210 aa12.01□□□□□ -0.49
HMGCL-203ENST00000374490 NRIP2Q9BQI9 281 aa12.01□□□□□ -0.49
HMGCL-203ENST00000374490 FAM212BQ9NTI7 297 aaPredicted RBP12.01□□□□□ -0.49
HMGCL-203ENST00000374490 PRELID1Q9Y255 219 aa12.01□□□□□ -0.49
HMGCL-203ENST00000374490 SMG1Q96Q15 3661 aaKnown RBP12.01□□□□□ -0.49
HMGCL-203ENST00000374490 PIGBOS1A0A0B4J2F0 54 aa12□□□□□ -0.49
HMGCL-203ENST00000374490 GPR31O00270 319 aa12□□□□□ -0.49
HMGCL-203ENST00000374490 C1QL1O75973 258 aa12□□□□□ -0.49
HMGCL-203ENST00000374490 SCGB1D2O95969 90 aa12□□□□□ -0.49
HMGCL-203ENST00000374490 MBPP02686 304 aaPredicted RBP12□□□□□ -0.49
HMGCL-203ENST00000374490 GLAP06280 429 aa12□□□□□ -0.49
HMGCL-203ENST00000374490 SEC11BP0C7V7 166 aa12□□□□□ -0.49
HMGCL-203ENST00000374490 ARR3P36575 388 aa12□□□□□ -0.49
HMGCL-203ENST00000374490 LHX2P50458 406 aa12□□□□□ -0.49
HMGCL-203ENST00000374490 UCNP55089 124 aa12□□□□□ -0.49
HMGCL-203ENST00000374490 TMEM33P57088 247 aa12□□□□□ -0.49
HMGCL-203ENST00000374490 RND3P61587 244 aa12□□□□□ -0.49
HMGCL-203ENST00000374490 DHRS7BQ6IAN0 325 aaPredicted RBP12□□□□□ -0.49
HMGCL-203ENST00000374490 OR2A2Q6IF42 318 aa12□□□□□ -0.49
HMGCL-203ENST00000374490 EML6Q6ZMW3 1958 aa12□□□□□ -0.49
HMGCL-203ENST00000374490 SLC25A26Q70HW3 274 aa12□□□□□ -0.49
HMGCL-203ENST00000374490 MRPL21Q7Z2W9 205 aaKnown RBP12□□□□□ -0.49
HMGCL-203ENST00000374490 LINC00596Q86U02 117 aa12□□□□□ -0.49
HMGCL-203ENST00000374490 ZDHHC23Q8IYP9 409 aa12□□□□□ -0.49
HMGCL-203ENST00000374490 CPEB3Q8NE35 698 aaKnown RBP12□□□□□ -0.49
HMGCL-203ENST00000374490 NBEAQ8NFP9 2946 aa12□□□□□ -0.49
HMGCL-203ENST00000374490 MSI2Q96DH6 328 aaKnown RBP12□□□□□ -0.49
HMGCL-203ENST00000374490 MARS2Q96GW9 593 aaKnown RBP12□□□□□ -0.49
HMGCL-203ENST00000374490 SPIN2AQ99865 258 aa12□□□□□ -0.49
HMGCL-203ENST00000374490 SPIN2BQ9BPZ2 258 aa12□□□□□ -0.49
HMGCL-203ENST00000374490 REPIN1Q9BWE0 567 aaKnown RBP12□□□□□ -0.49
HMGCL-203ENST00000374490 HRH4Q9H3N8 390 aa12□□□□□ -0.49
HMGCL-203ENST00000374490 NCOA6Q14686 2063 aaPredicted RBP12□□□□□ -0.49
HMGCL-203ENST00000374490 DUXBA0A1W2PPF3 345 aa12□□□□□ -0.49
HMGCL-203ENST00000374490 ST8SIA3O43173 380 aa12□□□□□ -0.49
HMGCL-203ENST00000374490 FBXO24O75426 580 aa12□□□□□ -0.49
HMGCL-203ENST00000374490 OR7C1O76099 320 aaPredicted RBP12□□□□□ -0.49
HMGCL-203ENST00000374490 CDS2O95674 445 aa12□□□□□ -0.49
HMGCL-203ENST00000374490 CTXN2P0C2S0 81 aa12□□□□□ -0.49
HMGCL-203ENST00000374490 NME2P22392 152 aa12□□□□□ -0.49
HMGCL-203ENST00000374490 AADACP22760 399 aa12□□□□□ -0.49
HMGCL-203ENST00000374490 LPAR6P43657 344 aa12□□□□□ -0.49
HMGCL-203ENST00000374490 RAB5CP51148 216 aa12□□□□□ -0.49
HMGCL-203ENST00000374490 CLDN18P56856 261 aa12□□□□□ -0.49
HMGCL-203ENST00000374490 FGF12P61328 243 aa12□□□□□ -0.49
HMGCL-203ENST00000374490 PRDX4Q13162 271 aa12□□□□□ -0.49
HMGCL-203ENST00000374490 HMGN3Q15651 99 aa12□□□□□ -0.49
HMGCL-203ENST00000374490 LDLRAD3Q86YD5 345 aa12□□□□□ -0.49
HMGCL-203ENST00000374490 MKXQ8IYA7 352 aa12□□□□□ -0.49
HMGCL-203ENST00000374490 OR56B2PQ8NGI1 322 aa12□□□□□ -0.49
HMGCL-203ENST00000374490 EXTL1Q92935 676 aa12□□□□□ -0.49
HMGCL-203ENST00000374490 PAPOLGQ9BWT3 736 aaKnown RBP12□□□□□ -0.49
HMGCL-203ENST00000374490 PLK3Q9H4B4 646 aa12□□□□□ -0.49
HMGCL-203ENST00000374490 SLC7A10Q9NS82 523 aa12□□□□□ -0.49
HMGCL-203ENST00000374490 RCC2Q9P258 522 aaKnown RBP12□□□□□ -0.49
HMGCL-203ENST00000374490 IL17BQ9UHF5 180 aa12□□□□□ -0.49
HMGCL-203ENST00000374490 KIR2DS1A0A191URI9 304 aa11.99□□□□□ -0.49
HMGCL-203ENST00000374490 RNASEK-C17orf49H0YIS7 233 aa11.99□□□□□ -0.49
HMGCL-203ENST00000374490 NEURL1O76050 574 aa11.99□□□□□ -0.49
HMGCL-203ENST00000374490 PPYP01298 95 aa11.99□□□□□ -0.49
HMGCL-203ENST00000374490 RCC1P18754 421 aaPredicted RBP11.99□□□□□ -0.49
HMGCL-203ENST00000374490 IL32P24001 234 aa11.99□□□□□ -0.49
HMGCL-203ENST00000374490 KIR2DS4P43632 304 aa11.99□□□□□ -0.49
HMGCL-203ENST00000374490 AKR1C2P52895 323 aa11.99□□□□□ -0.49
HMGCL-203ENST00000374490 TMPRSS3P57727 454 aa11.99□□□□□ -0.49
HMGCL-203ENST00000374490 AKR1C1Q04828 323 aa11.99□□□□□ -0.49
HMGCL-203ENST00000374490 KIR2DS1Q14954 304 aa11.99□□□□□ -0.49
HMGCL-203ENST00000374490 RNPS1Q15287 305 aaKnown RBP11.99□□□□□ -0.49
HMGCL-203ENST00000374490 GUCA2BQ16661 112 aa11.99□□□□□ -0.49
HMGCL-203ENST00000374490 CEACAM21Q3KPI0 293 aa11.99□□□□□ -0.49
HMGCL-203ENST00000374490 PHLDA2Q53GA4 152 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms