RNA–Protein interactions for RNA: ENST00000373020.8

TSPAN6-201, Transcript of tetraspanin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN6, Length 2,206 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN6-201ENST00000373020 ST8SIA3O43173 380 aa10.78□□□□□ -0.68
TSPAN6-201ENST00000373020 CDS2O95674 445 aa10.78□□□□□ -0.68
TSPAN6-201ENST00000373020 OR8U9P0C7N5 309 aa10.78□□□□□ -0.68
TSPAN6-201ENST00000373020 DANCRP0C864 163 aa10.78□□□□□ -0.68
TSPAN6-201ENST00000373020 SPP1P10451 314 aa10.78□□□□□ -0.68
TSPAN6-201ENST00000373020 LMO1P25800 156 aa10.78□□□□□ -0.68
TSPAN6-201ENST00000373020 DVL1P1P54792 670 aaPredicted RBP10.78□□□□□ -0.68
TSPAN6-201ENST00000373020 FOXG1P55316 489 aaPredicted RBP10.78□□□□□ -0.68
TSPAN6-201ENST00000373020 MPV17LQ2QL34 196 aa10.78□□□□□ -0.68
TSPAN6-201ENST00000373020 CEACAM21Q3KPI0 293 aa10.78□□□□□ -0.68
TSPAN6-201ENST00000373020 TUSC5Q8IXB3 177 aa10.78□□□□□ -0.68
TSPAN6-201ENST00000373020 ZDHHC23Q8IYP9 409 aa10.78□□□□□ -0.68
TSPAN6-201ENST00000373020 OR8U1Q8NH10 309 aa10.78□□□□□ -0.68
TSPAN6-201ENST00000373020 APOBEC3DQ96AK3 386 aaPredicted RBP10.78□□□□□ -0.68
TSPAN6-201ENST00000373020 USB1Q9BQ65 265 aaKnown RBP10.78□□□□□ -0.68
TSPAN6-201ENST00000373020 HES7Q9BYE0 225 aa10.78□□□□□ -0.68
TSPAN6-201ENST00000373020 FOXJ2Q9P0K8 574 aa10.78□□□□□ -0.68
TSPAN6-201ENST00000373020 FREM2Q5SZK8 3169 aa10.78□□□□□ -0.68
TSPAN6-201ENST00000373020 BORCS7-ASMTA0A0B4J1R7 106 aa10.77□□□□□ -0.68
TSPAN6-201ENST00000373020 C3orf85A0A1B0GTC6 90 aa10.77□□□□□ -0.68
TSPAN6-201ENST00000373020 A0A1W2PNU3 283 aaPredicted RBP10.77□□□□□ -0.68
TSPAN6-201ENST00000373020 C9JQL5 133 aa10.77□□□□□ -0.68
TSPAN6-201ENST00000373020 TUSC2O75896 110 aa10.77□□□□□ -0.68
TSPAN6-201ENST00000373020 HLA-HP01893 362 aa10.77□□□□□ -0.68
TSPAN6-201ENST00000373020 JMJD7P0C870 316 aa10.77□□□□□ -0.68
TSPAN6-201ENST00000373020 PVALBP20472 110 aaPredicted RBP10.77□□□□□ -0.68
TSPAN6-201ENST00000373020 GNRHRP30968 328 aa10.77□□□□□ -0.68
TSPAN6-201ENST00000373020 RFC3P40938 356 aa10.77□□□□□ -0.68
TSPAN6-201ENST00000373020 ID4P47928 161 aa10.77□□□□□ -0.68
TSPAN6-201ENST00000373020 ABHD17BQ5VST6 288 aa10.77□□□□□ -0.68
TSPAN6-201ENST00000373020 CDCP2Q5VXM1 449 aa10.77□□□□□ -0.68
TSPAN6-201ENST00000373020 COMMD1Q8N668 190 aa10.77□□□□□ -0.68
TSPAN6-201ENST00000373020 SLAMF9Q96A28 289 aa10.77□□□□□ -0.68
TSPAN6-201ENST00000373020 TMEM56Q96MV1 263 aa10.77□□□□□ -0.68
TSPAN6-201ENST00000373020 SCRT1Q9BWW7 348 aa10.77□□□□□ -0.68
TSPAN6-201ENST00000373020 TTTY12Q9BZ98 90 aa10.77□□□□□ -0.68
TSPAN6-201ENST00000373020 PRRG4Q9BZD6 226 aa10.77□□□□□ -0.68
TSPAN6-201ENST00000373020 TMEM56-RWDD3S4R434 201 aa10.77□□□□□ -0.68
TSPAN6-201ENST00000373020 TECTAO75443 2155 aa10.77□□□□□ -0.69
TSPAN6-201ENST00000373020 A0A096LPE4 126 aa10.77□□□□□ -0.69
TSPAN6-201ENST00000373020 A0A1W2PPZ6 126 aa10.77□□□□□ -0.69
TSPAN6-201ENST00000373020 C5orf49A4QMS7 147 aa10.77□□□□□ -0.69
TSPAN6-201ENST00000373020 TRDCB7Z8K6 153 aa10.77□□□□□ -0.69
TSPAN6-201ENST00000373020 H7C2Y5 167 aa10.77□□□□□ -0.69
TSPAN6-201ENST00000373020 SYNGR4O95473 234 aa10.77□□□□□ -0.69
TSPAN6-201ENST00000373020 CD80P33681 288 aa10.77□□□□□ -0.69
TSPAN6-201ENST00000373020 HAAOP46952 286 aa10.77□□□□□ -0.69
TSPAN6-201ENST00000373020 SRYQ05066 204 aa10.77□□□□□ -0.69
TSPAN6-201ENST00000373020 LPAL2Q16609 132 aa10.77□□□□□ -0.69
TSPAN6-201ENST00000373020 MRPL21Q7Z2W9 205 aaKnown RBP10.77□□□□□ -0.69
TSPAN6-201ENST00000373020 DPPA2Q7Z7J5 298 aa10.77□□□□□ -0.69
TSPAN6-201ENST00000373020 KIRREL1Q96J84 757 aa10.77□□□□□ -0.69
TSPAN6-201ENST00000373020 HS3ST6Q96QI5 342 aa10.77□□□□□ -0.69
TSPAN6-201ENST00000373020 GPR87Q9BY21 358 aa10.77□□□□□ -0.69
TSPAN6-201ENST00000373020 OPA3Q9H6K4 179 aa10.77□□□□□ -0.69
TSPAN6-201ENST00000373020 MTCH1Q9NZJ7 389 aa10.77□□□□□ -0.69
TSPAN6-201ENST00000373020 ZDBF2Q9HCK1 2354 aa10.77□□□□□ -0.69
TSPAN6-201ENST00000373020 C21orf140B9A014 251 aa10.76□□□□□ -0.69
TSPAN6-201ENST00000373020 GLI4P10075 376 aa10.76□□□□□ -0.69
TSPAN6-201ENST00000373020 MPLP40238 635 aa10.76□□□□□ -0.69
TSPAN6-201ENST00000373020 MAGEA5P43359 124 aa10.76□□□□□ -0.69
TSPAN6-201ENST00000373020 GPM6AP51674 278 aa10.76□□□□□ -0.69
TSPAN6-201ENST00000373020 HERPUD1Q15011 391 aa10.76□□□□□ -0.69
TSPAN6-201ENST00000373020 OR1C1Q15619 314 aa10.76□□□□□ -0.69
TSPAN6-201ENST00000373020 SWI5Q1ZZU3 235 aa10.76□□□□□ -0.69
TSPAN6-201ENST00000373020 C9orf135Q5VTT2 229 aa10.76□□□□□ -0.69
TSPAN6-201ENST00000373020 CLEC9AQ6UXN8 241 aa10.76□□□□□ -0.69
TSPAN6-201ENST00000373020 BATF2Q8N1L9 274 aa10.76□□□□□ -0.69
TSPAN6-201ENST00000373020 OR10Z1Q8NGY1 313 aa10.76□□□□□ -0.69
TSPAN6-201ENST00000373020 BOD1Q96IK1 185 aa10.76□□□□□ -0.69
TSPAN6-201ENST00000373020 ABHD14BQ96IU4 210 aa10.76□□□□□ -0.69
TSPAN6-201ENST00000373020 POM121L2Q96KW2 1035 aa10.76□□□□□ -0.69
TSPAN6-201ENST00000373020 CALHM2Q9HA72 323 aa10.76□□□□□ -0.69
TSPAN6-201ENST00000373020 DUXBA0A1W2PPF3 345 aa10.76□□□□□ -0.69
TSPAN6-201ENST00000373020 CCL2P13500 99 aa10.76□□□□□ -0.69
TSPAN6-201ENST00000373020 TMEM251Q8N6I4 163 aa10.76□□□□□ -0.69
TSPAN6-201ENST00000373020 GTF3AQ92664 365 aaKnown RBP10.76□□□□□ -0.69
TSPAN6-201ENST00000373020 APH1AQ96BI3 265 aa10.76□□□□□ -0.69
TSPAN6-201ENST00000373020 ABI3Q9P2A4 366 aa10.76□□□□□ -0.69
TSPAN6-201ENST00000373020 IL36RNQ9UBH0 155 aa10.76□□□□□ -0.69
TSPAN6-201ENST00000373020 CLEC18AA5D8T8 446 aa10.75□□□□□ -0.69
TSPAN6-201ENST00000373020 NKX2-6A6NCS4 301 aa10.75□□□□□ -0.69
TSPAN6-201ENST00000373020 FAM166BA8MTA8 275 aa10.75□□□□□ -0.69
TSPAN6-201ENST00000373020 AGPAT2O15120 278 aa10.75□□□□□ -0.69
TSPAN6-201ENST00000373020 TK1P04183 234 aa10.75□□□□□ -0.69
TSPAN6-201ENST00000373020 PAX6P26367 422 aa10.75□□□□□ -0.69
TSPAN6-201ENST00000373020 ARR3P36575 388 aa10.75□□□□□ -0.69
TSPAN6-201ENST00000373020 SNCAP37840 140 aa10.75□□□□□ -0.69
TSPAN6-201ENST00000373020 RAB5CP51148 216 aa10.75□□□□□ -0.69
TSPAN6-201ENST00000373020 EWSR1Q01844 656 aaKnown RBP eCLIP10.75□□□□□ -0.69
TSPAN6-201ENST00000373020 MIDNQ504T8 468 aa10.75□□□□□ -0.69
TSPAN6-201ENST00000373020 DCAF10Q5QP82 559 aa10.75□□□□□ -0.69
TSPAN6-201ENST00000373020 MEX3BQ6ZN04 569 aaKnown RBP10.75□□□□□ -0.69
TSPAN6-201ENST00000373020 LINC00596Q86U02 117 aa10.75□□□□□ -0.69
TSPAN6-201ENST00000373020 TBC1D26Q86UD7 250 aa10.75□□□□□ -0.69
TSPAN6-201ENST00000373020 MKXQ8IYA7 352 aa10.75□□□□□ -0.69
TSPAN6-201ENST00000373020 CLEC18CQ8NCF0 446 aa10.75□□□□□ -0.69
TSPAN6-201ENST00000373020 OR5A2Q8NGI9 324 aa10.75□□□□□ -0.69
TSPAN6-201ENST00000373020 LUZP4Q9P127 313 aa10.75□□□□□ -0.69
TSPAN6-201ENST00000373020 KPTNQ9Y664 436 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms