RNA–Protein interactions for RNA: ENST00000372920.1

HNF4A-203, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best)

Gene HNF4A, Length 3,340 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-203ENST00000372920 BATF2Q8N1L9 274 aa15.6■□□□□ 0.09
HNF4A-203ENST00000372920 INTS12Q96CB8 462 aaKnown RBP15.6■□□□□ 0.09
HNF4A-203ENST00000372920 SLC25A31Q9H0C2 315 aa15.6■□□□□ 0.09
HNF4A-203ENST00000372920 P4HTMQ9NXG6 502 aa15.6■□□□□ 0.09
HNF4A-203ENST00000372920 C19orf25Q9UFG5 118 aaPredicted RBP15.6■□□□□ 0.09
HNF4A-203ENST00000372920 RARRES3Q9UL19 164 aa15.6■□□□□ 0.09
HNF4A-203ENST00000372920 SDK1Q7Z5N4 2213 aa15.6■□□□□ 0.09
HNF4A-203ENST00000372920 ZNF729A6NN14 1252 aaPredicted RBP15.6■□□□□ 0.09
HNF4A-203ENST00000372920 G3V3Y1 287 aa15.6■□□□□ 0.09
HNF4A-203ENST00000372920 SCAF4O95104 1147 aaKnown RBP15.6■□□□□ 0.09
HNF4A-203ENST00000372920 SLC34A2O95436 690 aa15.6■□□□□ 0.09
HNF4A-203ENST00000372920 EPHA1P21709 976 aa15.6■□□□□ 0.09
HNF4A-203ENST00000372920 ERVFRD-1P60508 538 aa15.6■□□□□ 0.09
HNF4A-203ENST00000372920 OR8B8Q15620 311 aa15.6■□□□□ 0.09
HNF4A-203ENST00000372920 C9orf152Q5JTZ5 239 aa15.6■□□□□ 0.09
HNF4A-203ENST00000372920 SP5Q6BEB4 398 aaPredicted RBP15.6■□□□□ 0.09
HNF4A-203ENST00000372920 ODF3L1Q8IXM7 274 aa15.6■□□□□ 0.09
HNF4A-203ENST00000372920 ZNF610Q8N9Z0 462 aa15.6■□□□□ 0.09
HNF4A-203ENST00000372920 IL36GQ9NZH8 169 aa15.6■□□□□ 0.09
HNF4A-203ENST00000372920 TNFSF11O14788 317 aa15.6■□□□□ 0.09
HNF4A-203ENST00000372920 TOX3O15405 576 aaPredicted RBP15.6■□□□□ 0.09
HNF4A-203ENST00000372920 ADAM20O43506 726 aa15.6■□□□□ 0.09
HNF4A-203ENST00000372920 S100A2P29034 98 aa15.6■□□□□ 0.09
HNF4A-203ENST00000372920 DYNLT3P51808 116 aa15.6■□□□□ 0.09
HNF4A-203ENST00000372920 VAMP2P63027 116 aa15.6■□□□□ 0.09
HNF4A-203ENST00000372920 RUNX1Q01196 453 aa15.6■□□□□ 0.09
HNF4A-203ENST00000372920 CDPF1Q6NVV7 123 aa15.6■□□□□ 0.09
HNF4A-203ENST00000372920 DPPA2Q7Z7J5 298 aa15.6■□□□□ 0.09
HNF4A-203ENST00000372920 TMEM217Q8N7C4 229 aa15.6■□□□□ 0.09
HNF4A-203ENST00000372920 TMEM56Q96MV1 263 aa15.6■□□□□ 0.09
HNF4A-203ENST00000372920 SLC7A10Q9NS82 523 aa15.6■□□□□ 0.09
HNF4A-203ENST00000372920 TMEM56-RWDD3S4R434 201 aa15.6■□□□□ 0.09
HNF4A-203ENST00000372920 CEP290O15078 2479 aa15.59■□□□□ 0.09
HNF4A-203ENST00000372920 RBM11P57052 281 aaKnown RBP15.59■□□□□ 0.09
HNF4A-203ENST00000372920 EXT1Q16394 746 aa15.59■□□□□ 0.09
HNF4A-203ENST00000372920 C5orf24Q7Z6I8 188 aa15.59■□□□□ 0.09
HNF4A-203ENST00000372920 SELENOHQ8IZQ5 122 aaKnown RBP15.59■□□□□ 0.09
HNF4A-203ENST00000372920 GPHA2Q96T91 129 aa15.59■□□□□ 0.09
HNF4A-203ENST00000372920 GAR1Q9NY12 217 aaKnown RBP15.59■□□□□ 0.09
HNF4A-203ENST00000372920 ASCC3Q8N3C0 2202 aaKnown RBP15.59■□□□□ 0.09
HNF4A-203ENST00000372920 TGIF2-C20orf24A0A0A6YYL0 155 aa15.59■□□□□ 0.09
HNF4A-203ENST00000372920 CCDC163A0A0D9SF12 145 aa15.59■□□□□ 0.09
HNF4A-203ENST00000372920 ZIC3O60481 467 aa15.59■□□□□ 0.09
HNF4A-203ENST00000372920 OR7C1O76099 320 aaPredicted RBP15.59■□□□□ 0.09
HNF4A-203ENST00000372920 TMEM50AO95807 157 aa15.59■□□□□ 0.09
HNF4A-203ENST00000372920 RGS19P49795 217 aa15.59■□□□□ 0.09
HNF4A-203ENST00000372920 DAZAP2Q15038 168 aaPredicted RBP15.59■□□□□ 0.09
HNF4A-203ENST00000372920 SPIN3Q5JUX0 258 aa15.59■□□□□ 0.09
HNF4A-203ENST00000372920 FAM185AQ8N0U4 392 aa15.59■□□□□ 0.09
HNF4A-203ENST00000372920 GPR137CQ8N3F9 429 aa15.59■□□□□ 0.09
HNF4A-203ENST00000372920 SPIN2AQ99865 258 aa15.59■□□□□ 0.09
HNF4A-203ENST00000372920 SPIN2BQ9BPZ2 258 aa15.59■□□□□ 0.09
HNF4A-203ENST00000372920 WSB1Q9Y6I7 421 aa15.59■□□□□ 0.09
HNF4A-203ENST00000372920 A0A0J9YW62 118 aa15.58■□□□□ 0.09
HNF4A-203ENST00000372920 ZNF732B4DXR9 585 aa15.58■□□□□ 0.09
HNF4A-203ENST00000372920 SLC33A1O00400 549 aaPredicted RBP15.58■□□□□ 0.09
HNF4A-203ENST00000372920 CCL3P10147 92 aa15.58■□□□□ 0.09
HNF4A-203ENST00000372920 FUT3P21217 361 aa15.58■□□□□ 0.09
HNF4A-203ENST00000372920 SRXN1Q9BYN0 137 aa15.58■□□□□ 0.09
HNF4A-203ENST00000372920 PCED1AQ9H1Q7 454 aa15.58■□□□□ 0.09
HNF4A-203ENST00000372920 CRLF2Q9HC73 371 aa15.58■□□□□ 0.09
HNF4A-203ENST00000372920 PLSCR2Q9NRY7 297 aa15.58■□□□□ 0.09
HNF4A-203ENST00000372920 TREM2Q9NZC2 230 aa15.58■□□□□ 0.09
HNF4A-203ENST00000372920 CABIN1Q9Y6J0 2220 aa15.58■□□□□ 0.09
HNF4A-203ENST00000372920 ATXN7O15265 892 aaPredicted RBP15.58■□□□□ 0.08
HNF4A-203ENST00000372920 HSPB1P04792 205 aaKnown RBP15.58■□□□□ 0.08
HNF4A-203ENST00000372920 ZNF32P17041 273 aa15.58■□□□□ 0.08
HNF4A-203ENST00000372920 FUT6P51993 359 aa15.58■□□□□ 0.08
HNF4A-203ENST00000372920 ZNF506Q5JVG8 444 aa15.58■□□□□ 0.08
HNF4A-203ENST00000372920 SPNS3Q6ZMD2 512 aa15.58■□□□□ 0.08
HNF4A-203ENST00000372920 TVP23CQ96ET8 276 aa15.58■□□□□ 0.08
HNF4A-203ENST00000372920 PFDN5Q99471 154 aa15.58■□□□□ 0.08
HNF4A-203ENST00000372920 YKT6O15498 198 aa15.58■□□□□ 0.08
HNF4A-203ENST00000372920 NDUFS6O75380 124 aaKnown RBP15.58■□□□□ 0.08
HNF4A-203ENST00000372920 LIFP15018 202 aa15.58■□□□□ 0.08
HNF4A-203ENST00000372920 PLCXD3Q63HM9 321 aa15.58■□□□□ 0.08
HNF4A-203ENST00000372920 ZNF600Q6ZNG1 722 aa15.58■□□□□ 0.08
HNF4A-203ENST00000372920 NIPSNAP3BQ9BS92 247 aa15.58■□□□□ 0.08
HNF4A-203ENST00000372920 PARPBPQ9NWS1 579 aa15.58■□□□□ 0.08
HNF4A-203ENST00000372920 CA14Q9ULX7 337 aa15.58■□□□□ 0.08
HNF4A-203ENST00000372920 PTRH2Q9Y3E5 179 aaKnown RBP15.58■□□□□ 0.08
HNF4A-203ENST00000372920 HS3ST3B1Q9Y662 390 aa15.58■□□□□ 0.08
HNF4A-203ENST00000372920 EML6Q6ZMW3 1958 aa15.58■□□□□ 0.08
HNF4A-203ENST00000372920 HIST1H2BKO60814 126 aa15.57■□□□□ 0.08
HNF4A-203ENST00000372920 NXPH3O95157 252 aa15.57■□□□□ 0.08
HNF4A-203ENST00000372920 HIST1H2BJP06899 126 aa15.57■□□□□ 0.08
HNF4A-203ENST00000372920 CST2P09228 141 aa15.57■□□□□ 0.08
HNF4A-203ENST00000372920 HIST1H2BOP23527 126 aa15.57■□□□□ 0.08
HNF4A-203ENST00000372920 HIST1H2BBP33778 126 aa15.57■□□□□ 0.08
HNF4A-203ENST00000372920 NTF4P34130 210 aa15.57■□□□□ 0.08
HNF4A-203ENST00000372920 HIST1H2BDP58876 126 aa15.57■□□□□ 0.08
HNF4A-203ENST00000372920 HIST1H2BCP62807 126 aa15.57■□□□□ 0.08
HNF4A-203ENST00000372920 ZNF92Q03936 586 aa15.57■□□□□ 0.08
HNF4A-203ENST00000372920 HIST2H2BEQ16778 126 aa15.57■□□□□ 0.08
HNF4A-203ENST00000372920 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.57■□□□□ 0.08
HNF4A-203ENST00000372920 CALHM1Q8IU99 346 aa15.57■□□□□ 0.08
HNF4A-203ENST00000372920 ZNF383Q8NA42 475 aa15.57■□□□□ 0.08
HNF4A-203ENST00000372920 CLDND2Q8NHS1 167 aa15.57■□□□□ 0.08
HNF4A-203ENST00000372920 PIGCQ92535 297 aa15.57■□□□□ 0.08
HNF4A-203ENST00000372920 HIST1H2BHQ93079 126 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms