RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 AMER3Q8N944 861 aa10.18□□□□□ -0.78
VCL-202ENST00000372755 HMGCLL1Q8TB92 370 aa10.18□□□□□ -0.78
VCL-202ENST00000372755 WDR13Q9H1Z4 485 aa10.18□□□□□ -0.78
VCL-202ENST00000372755 SAP30LQ9HAJ7 183 aa10.18□□□□□ -0.78
VCL-202ENST00000372755 MYH4Q9Y623 1939 aa10.18□□□□□ -0.78
VCL-202ENST00000372755 A0A1B0GTH9 108 aa10.18□□□□□ -0.78
VCL-202ENST00000372755 PSG5Q15238 335 aa10.18□□□□□ -0.78
VCL-202ENST00000372755 FAM219AQ8IW50 185 aa10.18□□□□□ -0.78
VCL-202ENST00000372755 MSRB3Q8IXL7 192 aa10.18□□□□□ -0.78
VCL-202ENST00000372755 OR10A7Q8NGE5 316 aa10.18□□□□□ -0.78
VCL-202ENST00000372755 SRD5A3Q9H8P0 318 aa10.18□□□□□ -0.78
VCL-202ENST00000372755 TCFL5Q9UL49 500 aa10.18□□□□□ -0.78
VCL-202ENST00000372755 MICAL3Q7RTP6 2002 aa10.18□□□□□ -0.78
VCL-202ENST00000372755 MELTFP08582 738 aa10.18□□□□□ -0.78
VCL-202ENST00000372755 NPY1RP25929 384 aa10.18□□□□□ -0.78
VCL-202ENST00000372755 ID1P41134 155 aa10.18□□□□□ -0.78
VCL-202ENST00000372755 KIR2DL1P43626 348 aaPredicted RBP10.18□□□□□ -0.78
VCL-202ENST00000372755 KIR2DL2P43627 348 aaPredicted RBP10.18□□□□□ -0.78
VCL-202ENST00000372755 C10orf113Q5VZT2 155 aa10.18□□□□□ -0.78
VCL-202ENST00000372755 LINC00596Q86U02 117 aa10.18□□□□□ -0.78
VCL-202ENST00000372755 TGIF2LYQ8IUE0 185 aa10.18□□□□□ -0.78
VCL-202ENST00000372755 STXBP6Q8NFX7 210 aa10.18□□□□□ -0.78
VCL-202ENST00000372755 OR2Y1Q8NGV0 311 aa10.18□□□□□ -0.78
VCL-202ENST00000372755 MRPL37Q9BZE1 423 aaKnown RBP10.18□□□□□ -0.78
VCL-202ENST00000372755 CSN3P07498 182 aa10.18□□□□□ -0.78
VCL-202ENST00000372755 PATE4P0C8F1 98 aa10.18□□□□□ -0.78
VCL-202ENST00000372755 PAFAH1B2P68402 229 aa10.18□□□□□ -0.78
VCL-202ENST00000372755 INSL4Q14641 139 aa10.18□□□□□ -0.78
VCL-202ENST00000372755 HIST3H3Q16695 136 aa10.18□□□□□ -0.78
VCL-202ENST00000372755 MRM2Q9UI43 246 aaKnown RBP10.18□□□□□ -0.78
VCL-202ENST00000372755 A0A1W2PRD5 423 aa10.17□□□□□ -0.78
VCL-202ENST00000372755 A0A1W2PRF3 423 aa10.17□□□□□ -0.78
VCL-202ENST00000372755 A0A1W2PRM7 423 aa10.17□□□□□ -0.78
VCL-202ENST00000372755 MPZL1O95297 269 aa10.17□□□□□ -0.78
VCL-202ENST00000372755 LBHQ53QV2 105 aaPredicted RBP10.17□□□□□ -0.78
VCL-202ENST00000372755 KHDC3LQ587J8 217 aa10.17□□□□□ -0.78
VCL-202ENST00000372755 SPINK14Q6IE38 97 aa10.17□□□□□ -0.78
VCL-202ENST00000372755 MOGAT3Q86VF5 341 aa10.17□□□□□ -0.78
VCL-202ENST00000372755 ZBTB34Q8NCN2 500 aa10.17□□□□□ -0.78
VCL-202ENST00000372755 C17orf47Q8NEP4 570 aa10.17□□□□□ -0.78
VCL-202ENST00000372755 SMIM12Q96EX1 92 aa10.17□□□□□ -0.78
VCL-202ENST00000372755 ZNF71Q9NQZ8 489 aaPredicted RBP10.17□□□□□ -0.78
VCL-202ENST00000372755 LOXHD1Q8IVV2 1947 aa10.17□□□□□ -0.78
VCL-202ENST00000372755 MFSD2BA6NFX1 497 aa10.17□□□□□ -0.78
VCL-202ENST00000372755 LIPT2A6NK58 231 aa10.17□□□□□ -0.78
VCL-202ENST00000372755 RPL29P47914 159 aaKnown RBP10.17□□□□□ -0.78
VCL-202ENST00000372755 DLX1P56177 255 aa10.17□□□□□ -0.78
VCL-202ENST00000372755 C21orf58P58505 322 aa10.17□□□□□ -0.78
VCL-202ENST00000372755 OR4P4Q8NGL7 312 aa10.17□□□□□ -0.78
VCL-202ENST00000372755 ZNF764Q96H86 408 aaPredicted RBP10.17□□□□□ -0.78
VCL-202ENST00000372755 GPX7Q96SL4 187 aaPredicted RBP10.17□□□□□ -0.78
VCL-202ENST00000372755 TMEM210A6NLX4 147 aa10.17□□□□□ -0.78
VCL-202ENST00000372755 C21orf140B9A014 251 aa10.17□□□□□ -0.78
VCL-202ENST00000372755 PDE6DO43924 150 aa10.17□□□□□ -0.78
VCL-202ENST00000372755 ZNF253O75346 499 aa10.17□□□□□ -0.78
VCL-202ENST00000372755 COL8A1P27658 744 aa10.17□□□□□ -0.78
VCL-202ENST00000372755 CTGFP29279 349 aa10.17□□□□□ -0.78
VCL-202ENST00000372755 SULT1A1P50225 295 aa10.17□□□□□ -0.78
VCL-202ENST00000372755 IZUMO4Q1ZYL8 232 aa10.17□□□□□ -0.78
VCL-202ENST00000372755 FAM74A3Q4VXF1 159 aa10.17□□□□□ -0.78
VCL-202ENST00000372755 GVQW1Q8N7I0 195 aa10.17□□□□□ -0.78
VCL-202ENST00000372755 APOBEC4Q8WW27 367 aaKnown RBP10.17□□□□□ -0.78
VCL-202ENST00000372755 MOGAT1Q96PD6 335 aa10.17□□□□□ -0.78
VCL-202ENST00000372755 UBTD1Q9HAC8 227 aa10.17□□□□□ -0.78
VCL-202ENST00000372755 ASCL3Q9NQ33 180 aa10.17□□□□□ -0.78
VCL-202ENST00000372755 ZNF107Q9UII5 783 aaPredicted RBP10.17□□□□□ -0.78
VCL-202ENST00000372755 PCDHGA9Q9Y5G4 932 aaKnown RBP10.17□□□□□ -0.78
VCL-202ENST00000372755 DMKNQ6E0U4 476 aaPredicted RBP10.17□□□□□ -0.78
VCL-202ENST00000372755 LILRA6Q6PI73 481 aa10.17□□□□□ -0.78
VCL-202ENST00000372755 WDR74Q6RFH5 385 aaPredicted RBP10.17□□□□□ -0.78
VCL-202ENST00000372755 VN1R4Q7Z5H5 301 aa10.17□□□□□ -0.78
VCL-202ENST00000372755 D2HGDHQ8N465 521 aa10.17□□□□□ -0.78
VCL-202ENST00000372755 NFAM1Q8NET5 270 aaPredicted RBP10.17□□□□□ -0.78
VCL-202ENST00000372755 OR1L6Q8NGR2 347 aa10.17□□□□□ -0.78
VCL-202ENST00000372755 DYNLRB2Q8TF09 96 aa10.17□□□□□ -0.78
VCL-202ENST00000372755 FLYWCH2Q96CP2 140 aaKnown RBP10.17□□□□□ -0.78
VCL-202ENST00000372755 MARVELD1Q9BSK0 173 aa10.17□□□□□ -0.78
VCL-202ENST00000372755 PRSS50Q9UI38 385 aa10.17□□□□□ -0.78
VCL-202ENST00000372755 VDAC1P21796 283 aa10.17□□□□□ -0.78
VCL-202ENST00000372755 CD82P27701 267 aa10.17□□□□□ -0.78
VCL-202ENST00000372755 MVDP53602 400 aa10.17□□□□□ -0.78
VCL-202ENST00000372755 INPP5JQ15735 1006 aaPredicted RBP10.17□□□□□ -0.78
VCL-202ENST00000372755 SLC35E4Q6ICL7 350 aa10.17□□□□□ -0.78
VCL-202ENST00000372755 CLEC18BQ6UXF7 455 aa10.17□□□□□ -0.78
VCL-202ENST00000372755 SLC2A9Q9NRM0 540 aa10.17□□□□□ -0.78
VCL-202ENST00000372755 CES1P1Q9UKY3 287 aa10.17□□□□□ -0.78
VCL-202ENST00000372755 VSIG4Q9Y279 399 aa10.17□□□□□ -0.78
VCL-202ENST00000372755 R4GN57 208 aa10.17□□□□□ -0.78
VCL-202ENST00000372755 RGPD2P0DJD1 1756 aa10.17□□□□□ -0.78
VCL-202ENST00000372755 MYO18AQ92614 2054 aaKnown RBP10.16□□□□□ -0.78
VCL-202ENST00000372755 IGHV3-13P01766 116 aa10.16□□□□□ -0.78
VCL-202ENST00000372755 IGHV3-7P01780 117 aa10.16□□□□□ -0.78
VCL-202ENST00000372755 CT62P0C5K7 136 aa10.16□□□□□ -0.78
VCL-202ENST00000372755 GCSHP23434 173 aa10.16□□□□□ -0.78
VCL-202ENST00000372755 MPV17LQ2QL34 196 aa10.16□□□□□ -0.78
VCL-202ENST00000372755 TMEM92Q6UXU6 159 aa10.16□□□□□ -0.78
VCL-202ENST00000372755 THSD4Q6ZMP0 1018 aa10.16□□□□□ -0.78
VCL-202ENST00000372755 HSD17B13Q7Z5P4 300 aaPredicted RBP10.16□□□□□ -0.78
VCL-202ENST00000372755 SPNS2Q8IVW8 549 aa10.16□□□□□ -0.78
VCL-202ENST00000372755 COX14Q96I36 57 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms