RNA–Protein interactions for RNA: ENST00000372237.7

TMEM53-202, Transcript of transmembrane protein 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM53, Length 2,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-202ENST00000372237 PRDM14Q9GZV8 571 aa16.48■□□□□ 0.23
TMEM53-202ENST00000372237 TMEM222Q9H0R3 208 aa16.48■□□□□ 0.23
TMEM53-202ENST00000372237 PLSCR2Q9NRY7 297 aa16.48■□□□□ 0.23
TMEM53-202ENST00000372237 SLC7A10Q9NS82 523 aa16.48■□□□□ 0.23
TMEM53-202ENST00000372237 FAM86C1Q9NVL1 165 aa16.48■□□□□ 0.23
TMEM53-202ENST00000372237 RPL36A-HNRNPH2H7BZ11 118 aa16.48■□□□□ 0.23
TMEM53-202ENST00000372237 M0R036 132 aa16.48■□□□□ 0.23
TMEM53-202ENST00000372237 CDS2O95674 445 aa16.48■□□□□ 0.23
TMEM53-202ENST00000372237 CCNOP22674 350 aa16.48■□□□□ 0.23
TMEM53-202ENST00000372237 GNRHRP30968 328 aa16.48■□□□□ 0.23
TMEM53-202ENST00000372237 EWSR1Q01844 656 aaKnown RBP eCLIP16.48■□□□□ 0.23
TMEM53-202ENST00000372237 SPIN3Q5JUX0 258 aa16.48■□□□□ 0.23
TMEM53-202ENST00000372237 ACER2Q5QJU3 275 aa16.48■□□□□ 0.23
TMEM53-202ENST00000372237 DPPA2Q7Z7J5 298 aa16.48■□□□□ 0.23
TMEM53-202ENST00000372237 FAM185AQ8N0U4 392 aa16.48■□□□□ 0.23
TMEM53-202ENST00000372237 EXTL1Q92935 676 aa16.48■□□□□ 0.23
TMEM53-202ENST00000372237 BOD1Q96IK1 185 aa16.48■□□□□ 0.23
TMEM53-202ENST00000372237 NKX2-6A6NCS4 301 aa16.47■□□□□ 0.23
TMEM53-202ENST00000372237 TRDCB7Z8K6 153 aa16.47■□□□□ 0.23
TMEM53-202ENST00000372237 F10P00742 488 aa16.47■□□□□ 0.23
TMEM53-202ENST00000372237 LPAL2Q16609 132 aa16.47■□□□□ 0.23
TMEM53-202ENST00000372237 CDCP2Q5VXM1 449 aa16.47■□□□□ 0.23
TMEM53-202ENST00000372237 TMEM182Q6ZP80 229 aaPredicted RBP16.47■□□□□ 0.23
TMEM53-202ENST00000372237 OR2C3Q8N628 320 aa16.47■□□□□ 0.23
TMEM53-202ENST00000372237 TCFL5Q9UL49 500 aa16.47■□□□□ 0.23
TMEM53-202ENST00000372237 UBE2J1Q9Y385 318 aaPredicted RBP16.47■□□□□ 0.23
TMEM53-202ENST00000372237 MED19A0JLT2 244 aaPredicted RBP16.47■□□□□ 0.23
TMEM53-202ENST00000372237 C7orf77A4D0Y5 90 aa16.47■□□□□ 0.23
TMEM53-202ENST00000372237 ZNF44P15621 663 aa16.47■□□□□ 0.23
TMEM53-202ENST00000372237 PTAFRP25105 342 aa16.47■□□□□ 0.23
TMEM53-202ENST00000372237 NKX2-1P43699 371 aaPredicted RBP16.47■□□□□ 0.23
TMEM53-202ENST00000372237 HABP2Q14520 560 aaPredicted RBP16.47■□□□□ 0.23
TMEM53-202ENST00000372237 TBC1D26Q86UD7 250 aa16.47■□□□□ 0.23
TMEM53-202ENST00000372237 ZNF695Q8IW36 515 aa16.47■□□□□ 0.23
TMEM53-202ENST00000372237 SUMF1Q8NBK3 374 aa16.47■□□□□ 0.23
TMEM53-202ENST00000372237 HIST1H2BAQ96A08 127 aa16.47■□□□□ 0.23
TMEM53-202ENST00000372237 C20orf24Q9BUV8 137 aa16.47■□□□□ 0.23
TMEM53-202ENST00000372237 PBDC1Q9BVG4 233 aa16.47■□□□□ 0.23
TMEM53-202ENST00000372237 EGLN1Q9GZT9 426 aa16.47■□□□□ 0.23
TMEM53-202ENST00000372237 NOSIPQ9Y314 301 aaKnown RBP16.47■□□□□ 0.23
TMEM53-202ENST00000372237 FAM24AA6NFZ4 105 aa16.46■□□□□ 0.23
TMEM53-202ENST00000372237 C1orf196B1AJZ1 125 aa16.46■□□□□ 0.23
TMEM53-202ENST00000372237 MRPL33O75394 65 aaKnown RBP16.46■□□□□ 0.23
TMEM53-202ENST00000372237 TK1P04183 234 aa16.46■□□□□ 0.23
TMEM53-202ENST00000372237 IFNA4P05014 189 aa16.46■□□□□ 0.23
TMEM53-202ENST00000372237 BCL3P20749 454 aa16.46■□□□□ 0.23
TMEM53-202ENST00000372237 CYB561P49447 251 aa16.46■□□□□ 0.23
TMEM53-202ENST00000372237 OR56B2PQ8NGI1 322 aa16.46■□□□□ 0.23
TMEM53-202ENST00000372237 FAM213BQ8TBF2 198 aa16.46■□□□□ 0.23
TMEM53-202ENST00000372237 SLAMF9Q96A28 289 aa16.46■□□□□ 0.23
TMEM53-202ENST00000372237 IP6K3Q96PC2 410 aa16.46■□□□□ 0.23
TMEM53-202ENST00000372237 USB1Q9BQ65 265 aaKnown RBP16.46■□□□□ 0.23
TMEM53-202ENST00000372237 SMOC1Q9H4F8 434 aa16.46■□□□□ 0.23
TMEM53-202ENST00000372237 FBXO7Q9Y3I1 522 aa16.46■□□□□ 0.23
TMEM53-202ENST00000372237 A0A1B0GV50 99 aa16.46■□□□□ 0.23
TMEM53-202ENST00000372237 UMAD1C9J7I0 102 aa16.46■□□□□ 0.23
TMEM53-202ENST00000372237 HAAOP46952 286 aa16.46■□□□□ 0.23
TMEM53-202ENST00000372237 ZNF266Q14584 549 aa16.46■□□□□ 0.23
TMEM53-202ENST00000372237 CLINT1Q14677 625 aa16.46■□□□□ 0.23
TMEM53-202ENST00000372237 ZNF565Q8N9K5 539 aa16.46■□□□□ 0.23
TMEM53-202ENST00000372237 KDF1Q8NAX2 398 aaPredicted RBP16.46■□□□□ 0.23
TMEM53-202ENST00000372237 POM121Q96HA1 1249 aa16.46■□□□□ 0.23
TMEM53-202ENST00000372237 PINLYPA6NC86 204 aa16.45■□□□□ 0.22
TMEM53-202ENST00000372237 FAM90A10PA6NDY2 464 aa16.45■□□□□ 0.22
TMEM53-202ENST00000372237 FAM90A18PA6NE21 464 aa16.45■□□□□ 0.22
TMEM53-202ENST00000372237 FAM90A16PA6NEW6 464 aa16.45■□□□□ 0.22
TMEM53-202ENST00000372237 FAM90A20PA6NIJ5 464 aa16.45■□□□□ 0.22
TMEM53-202ENST00000372237 FAM90A8PA6NJQ4 464 aa16.45■□□□□ 0.22
TMEM53-202ENST00000372237 FAM90A7PA6NKC0 464 aa16.45■□□□□ 0.22
TMEM53-202ENST00000372237 FAM90A22PA8MWA6 464 aa16.45■□□□□ 0.22
TMEM53-202ENST00000372237 FAM90A12PA8MX19 464 aa16.45■□□□□ 0.22
TMEM53-202ENST00000372237 FAM90A5PA8MXJ8 464 aa16.45■□□□□ 0.22
TMEM53-202ENST00000372237 FAM90A23PA8MXZ1 464 aa16.45■□□□□ 0.22
TMEM53-202ENST00000372237 FAM90A15PP0C7V4 464 aa16.45■□□□□ 0.22
TMEM53-202ENST00000372237 FAM90A13PP0C7W8 464 aa16.45■□□□□ 0.22
TMEM53-202ENST00000372237 FAM90A14PP0C7W9 464 aa16.45■□□□□ 0.22
TMEM53-202ENST00000372237 FAM90A24PP0C7X0 464 aa16.45■□□□□ 0.22
TMEM53-202ENST00000372237 GFRA1P56159 465 aa16.45■□□□□ 0.22
TMEM53-202ENST00000372237 POLR2GP62487 172 aaKnown RBP eCLIP16.45■□□□□ 0.22
TMEM53-202ENST00000372237 C9orf135Q5VTT2 229 aa16.45■□□□□ 0.22
TMEM53-202ENST00000372237 COLCA1Q6ZS62 124 aa16.45■□□□□ 0.22
TMEM53-202ENST00000372237 KCNJ16Q9NPI9 418 aa16.45■□□□□ 0.22
TMEM53-202ENST00000372237 FREM2Q5SZK8 3169 aa16.45■□□□□ 0.22
TMEM53-202ENST00000372237 MEOX2P50222 304 aa16.45■□□□□ 0.22
TMEM53-202ENST00000372237 GPM6AP51674 278 aa16.45■□□□□ 0.22
TMEM53-202ENST00000372237 SNRPEP62304 92 aaKnown RBP16.45■□□□□ 0.22
TMEM53-202ENST00000372237 PRDX4Q13162 271 aa16.45■□□□□ 0.22
TMEM53-202ENST00000372237 NRN1LQ496H8 165 aa16.45■□□□□ 0.22
TMEM53-202ENST00000372237 C5orf24Q7Z6I8 188 aa16.45■□□□□ 0.22
TMEM53-202ENST00000372237 LFNGQ8NES3 379 aa16.45■□□□□ 0.22
TMEM53-202ENST00000372237 Q8NFD4 153 aa16.45■□□□□ 0.22
TMEM53-202ENST00000372237 ISOC2Q96AB3 205 aa16.45■□□□□ 0.22
TMEM53-202ENST00000372237 TMEM45BQ96B21 275 aa16.45■□□□□ 0.22
TMEM53-202ENST00000372237 TMEM56Q96MV1 263 aa16.45■□□□□ 0.22
TMEM53-202ENST00000372237 SPIN2AQ99865 258 aa16.45■□□□□ 0.22
TMEM53-202ENST00000372237 SPIN2BQ9BPZ2 258 aa16.45■□□□□ 0.22
TMEM53-202ENST00000372237 Q9N2K0 584 aa16.45■□□□□ 0.22
TMEM53-202ENST00000372237 RYDENQ9NUL5 291 aaKnown RBP16.45■□□□□ 0.22
TMEM53-202ENST00000372237 MRPS18CQ9Y3D5 142 aaKnown RBP16.45■□□□□ 0.22
TMEM53-202ENST00000372237 TMEM56-RWDD3S4R434 201 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms