RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 HIST1H1DP16402 221 aaKnown RBP13.67□□□□□ -0.22
GTF3C4-201ENST00000372146 CA6P23280 308 aa13.67□□□□□ -0.22
GTF3C4-201ENST00000372146 CRYBB2P43320 205 aa13.67□□□□□ -0.22
GTF3C4-201ENST00000372146 RAG2P55895 527 aa13.67□□□□□ -0.22
GTF3C4-201ENST00000372146 RLN3Q8WXF3 142 aa13.67□□□□□ -0.22
GTF3C4-201ENST00000372146 WBP2Q969T9 261 aa13.67□□□□□ -0.22
GTF3C4-201ENST00000372146 K7ESF4 209 aa13.67□□□□□ -0.22
GTF3C4-201ENST00000372146 KIR2DL1P43626 348 aaPredicted RBP13.67□□□□□ -0.22
GTF3C4-201ENST00000372146 KIR2DL2P43627 348 aaPredicted RBP13.67□□□□□ -0.22
GTF3C4-201ENST00000372146 ST6GALNAC3Q8NDV1 305 aa13.67□□□□□ -0.22
GTF3C4-201ENST00000372146 NUDT8Q8WV74 236 aa13.67□□□□□ -0.22
GTF3C4-201ENST00000372146 CLDN16Q9Y5I7 305 aa13.67□□□□□ -0.22
GTF3C4-201ENST00000372146 SURF2Q15527 256 aaPredicted RBP13.67□□□□□ -0.22
GTF3C4-201ENST00000372146 Q6ZSR9 355 aa13.67□□□□□ -0.22
GTF3C4-201ENST00000372146 ARIH2OSQ8N7S6 290 aa13.67□□□□□ -0.22
GTF3C4-201ENST00000372146 BCORP1Q8N888 145 aa13.67□□□□□ -0.22
GTF3C4-201ENST00000372146 AGBL5Q8NDL9 886 aa13.67□□□□□ -0.22
GTF3C4-201ENST00000372146 ADAP1O75689 374 aa13.67□□□□□ -0.22
GTF3C4-201ENST00000372146 HERPUD1Q15011 391 aa13.67□□□□□ -0.22
GTF3C4-201ENST00000372146 C19orf54Q5BKX5 351 aa13.67□□□□□ -0.22
GTF3C4-201ENST00000372146 TWSG1Q9GZX9 223 aa13.67□□□□□ -0.22
GTF3C4-201ENST00000372146 C1SP09871 688 aa13.67□□□□□ -0.22
GTF3C4-201ENST00000372146 IL10RAQ13651 578 aa13.67□□□□□ -0.22
GTF3C4-201ENST00000372146 CXorf67Q86X51 503 aaPredicted RBP13.67□□□□□ -0.22
GTF3C4-201ENST00000372146 ZNF740Q8NDX6 193 aa13.67□□□□□ -0.22
GTF3C4-201ENST00000372146 OR2Y1Q8NGV0 311 aa13.67□□□□□ -0.22
GTF3C4-201ENST00000372146 SSMEM1Q8WWF3 244 aa13.67□□□□□ -0.22
GTF3C4-201ENST00000372146 PPT2Q9UMR5 302 aa13.67□□□□□ -0.22
GTF3C4-201ENST00000372146 SYNGR2O43760 224 aa13.66□□□□□ -0.22
GTF3C4-201ENST00000372146 CYB561P49447 251 aa13.66□□□□□ -0.22
GTF3C4-201ENST00000372146 LRRC10Q5BKY1 277 aa13.66□□□□□ -0.22
GTF3C4-201ENST00000372146 VCX2Q9H322 139 aa13.66□□□□□ -0.22
GTF3C4-201ENST00000372146 LPAR6P43657 344 aa13.66□□□□□ -0.22
GTF3C4-201ENST00000372146 PFN3P60673 137 aa13.66□□□□□ -0.22
GTF3C4-201ENST00000372146 BTG2P78543 158 aa13.66□□□□□ -0.22
GTF3C4-201ENST00000372146 SPANXN1Q5VSR9 72 aa13.66□□□□□ -0.22
GTF3C4-201ENST00000372146 SLC39A5Q6ZMH5 540 aa13.66□□□□□ -0.22
GTF3C4-201ENST00000372146 SLCO4C1Q6ZQN7 724 aa13.66□□□□□ -0.22
GTF3C4-201ENST00000372146 ALPK2Q86TB3 2170 aa13.66□□□□□ -0.22
GTF3C4-201ENST00000372146 FOLR2P14207 255 aa13.66□□□□□ -0.22
GTF3C4-201ENST00000372146 NTMQ9P121 344 aa13.66□□□□□ -0.22
GTF3C4-201ENST00000372146 PLPP1O14494 284 aa13.66□□□□□ -0.22
GTF3C4-201ENST00000372146 F11P03951 625 aa13.66□□□□□ -0.22
GTF3C4-201ENST00000372146 Q7L0L9 218 aa13.66□□□□□ -0.22
GTF3C4-201ENST00000372146 WNT5BQ9H1J7 359 aa13.66□□□□□ -0.22
GTF3C4-201ENST00000372146 A0A0B4J293 547 aa13.66□□□□□ -0.22
GTF3C4-201ENST00000372146 TSPO2Q5TGU0 170 aa13.66□□□□□ -0.22
GTF3C4-201ENST00000372146 UBALD2Q8IYN6 164 aa13.66□□□□□ -0.22
GTF3C4-201ENST00000372146 SLC25A19Q9HC21 320 aa13.66□□□□□ -0.22
GTF3C4-201ENST00000372146 GLRX2Q9NS18 164 aa13.66□□□□□ -0.22
GTF3C4-201ENST00000372146 ERRFI1Q9UJM3 462 aaPredicted RBP13.66□□□□□ -0.22
GTF3C4-201ENST00000372146 LRP12Q9Y561 859 aa13.66□□□□□ -0.22
GTF3C4-201ENST00000372146 A0A1B0GWB2 263 aa13.66□□□□□ -0.22
GTF3C4-201ENST00000372146 C7orf71A4D174 169 aa13.66□□□□□ -0.22
GTF3C4-201ENST00000372146 KCNAB3O43448 404 aa13.66□□□□□ -0.22
GTF3C4-201ENST00000372146 P2RY1P47900 373 aa13.66□□□□□ -0.22
GTF3C4-201ENST00000372146 PRR13Q9NZ81 148 aa13.66□□□□□ -0.22
GTF3C4-201ENST00000372146 MFAP2P55001 183 aa13.65□□□□□ -0.22
GTF3C4-201ENST00000372146 NRSN2Q9GZP1 204 aa13.65□□□□□ -0.22
GTF3C4-201ENST00000372146 OCIAD1Q9NX40 245 aa13.65□□□□□ -0.22
GTF3C4-201ENST00000372146 LEPROTL1O95214 131 aa13.65□□□□□ -0.22
GTF3C4-201ENST00000372146 PARS2Q7L3T8 475 aaKnown RBP13.65□□□□□ -0.22
GTF3C4-201ENST00000372146 C20orf196Q8IYI0 205 aa13.65□□□□□ -0.22
GTF3C4-201ENST00000372146 OR11H7Q8NGC8 314 aa13.65□□□□□ -0.22
GTF3C4-201ENST00000372146 RHBDD1Q8TEB9 315 aa13.65□□□□□ -0.22
GTF3C4-201ENST00000372146 IL20Q9NYY1 176 aa13.65□□□□□ -0.22
GTF3C4-201ENST00000372146 TCRBV5S2A0A599 114 aa13.65□□□□□ -0.22
GTF3C4-201ENST00000372146 FKBP2P26885 142 aaKnown RBP13.65□□□□□ -0.22
GTF3C4-201ENST00000372146 C1orf220Q5T0J3 134 aa13.65□□□□□ -0.22
GTF3C4-201ENST00000372146 MRGPRGQ86SM5 289 aa13.65□□□□□ -0.22
GTF3C4-201ENST00000372146 PTOV1Q86YD1 416 aa13.65□□□□□ -0.22
GTF3C4-201ENST00000372146 SLC25A43Q8WUT9 341 aaPredicted RBP13.65□□□□□ -0.22
GTF3C4-201ENST00000372146 PTP4A1Q93096 173 aa13.65□□□□□ -0.22
GTF3C4-201ENST00000372146 HES7Q9BYE0 225 aa13.65□□□□□ -0.22
GTF3C4-201ENST00000372146 SNED1Q8TER0 1413 aa13.65□□□□□ -0.22
GTF3C4-201ENST00000372146 GNG7O60262 68 aa13.65□□□□□ -0.22
GTF3C4-201ENST00000372146 MDH2P40926 338 aaKnown RBP13.65□□□□□ -0.22
GTF3C4-201ENST00000372146 KCNAB1Q14722 419 aa13.65□□□□□ -0.22
GTF3C4-201ENST00000372146 GRAMD2BQ96HH9 432 aa13.65□□□□□ -0.22
GTF3C4-201ENST00000372146 PKIBQ9C010 78 aa13.65□□□□□ -0.22
GTF3C4-201ENST00000372146 CHRNA10Q9GZZ6 450 aa13.65□□□□□ -0.22
GTF3C4-201ENST00000372146 SLCO2B1O94956 709 aa13.65□□□□□ -0.22
GTF3C4-201ENST00000372146 B4GALT1P15291 398 aa13.65□□□□□ -0.22
GTF3C4-201ENST00000372146 RRADP55042 308 aa13.65□□□□□ -0.22
GTF3C4-201ENST00000372146 INSM1Q01101 510 aaPredicted RBP13.65□□□□□ -0.22
GTF3C4-201ENST00000372146 DUSP8Q13202 625 aa13.65□□□□□ -0.22
GTF3C4-201ENST00000372146 WDFY2Q96P53 400 aa13.65□□□□□ -0.22
GTF3C4-201ENST00000372146 CDAP32320 146 aa13.65□□□□□ -0.22
GTF3C4-201ENST00000372146 MMP16P51512 607 aa13.65□□□□□ -0.22
GTF3C4-201ENST00000372146 LDLRAD3Q86YD5 345 aa13.65□□□□□ -0.22
GTF3C4-201ENST00000372146 FGF20Q9NP95 211 aaPredicted RBP13.65□□□□□ -0.22
GTF3C4-201ENST00000372146 MTFP1Q9UDX5 166 aa13.65□□□□□ -0.22
GTF3C4-201ENST00000372146 MOB4Q9Y3A3 225 aa13.65□□□□□ -0.22
GTF3C4-201ENST00000372146 KBTBD11O94819 623 aa13.64□□□□□ -0.23
GTF3C4-201ENST00000372146 POLR2GP62487 172 aaKnown RBP eCLIP13.64□□□□□ -0.23
GTF3C4-201ENST00000372146 RPS4XP62701 263 aaKnown RBP13.64□□□□□ -0.23
GTF3C4-201ENST00000372146 LPAL2Q16609 132 aa13.64□□□□□ -0.23
GTF3C4-201ENST00000372146 ASCL4Q6XD76 172 aa13.64□□□□□ -0.23
GTF3C4-201ENST00000372146 RBKSQ9H477 322 aa13.64□□□□□ -0.23
GTF3C4-201ENST00000372146 SPCS1Q9Y6A9 102 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms