RNA–Protein interactions for RNA: ENST00000371748.9

LHX3-202, Transcript of LIM homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene LHX3, Length 2,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-202ENST00000371748 HAGHLQ6PII5 290 aaPredicted RBP17■□□□□ 0.31
LHX3-202ENST00000371748 OR5A2Q8NGI9 324 aa17■□□□□ 0.31
LHX3-202ENST00000371748 OR5L1Q8NGL2 311 aa17■□□□□ 0.31
LHX3-202ENST00000371748 MARS2Q96GW9 593 aaKnown RBP17■□□□□ 0.31
LHX3-202ENST00000371748 LIME1Q9H400 295 aa17■□□□□ 0.31
LHX3-202ENST00000371748 TRBV6-7A0A0A0MS04 114 aa16.99■□□□□ 0.31
LHX3-202ENST00000371748 C13orf42A0A1B0GVH6 325 aa16.99■□□□□ 0.31
LHX3-202ENST00000371748 ZNF98A6NK75 572 aa16.99■□□□□ 0.31
LHX3-202ENST00000371748 SYNGR1O43759 233 aa16.99■□□□□ 0.31
LHX3-202ENST00000371748 KNG1P01042 644 aa16.99■□□□□ 0.31
LHX3-202ENST00000371748 OR5H8P0DN80 308 aa16.99■□□□□ 0.31
LHX3-202ENST00000371748 FUT3P21217 361 aa16.99■□□□□ 0.31
LHX3-202ENST00000371748 Q6ZPA2 131 aa16.99■□□□□ 0.31
LHX3-202ENST00000371748 Q6ZT83 130 aa16.99■□□□□ 0.31
LHX3-202ENST00000371748 Q8NFD4 153 aa16.99■□□□□ 0.31
LHX3-202ENST00000371748 OR5P3Q8WZ94 311 aa16.99■□□□□ 0.31
LHX3-202ENST00000371748 RRNAD1Q96FB5 475 aaKnown RBP16.99■□□□□ 0.31
LHX3-202ENST00000371748 RNF126Q9BV68 326 aa16.99■□□□□ 0.31
LHX3-202ENST00000371748 MLXQ9UH92 298 aa16.99■□□□□ 0.31
LHX3-202ENST00000371748 C5orf51A6NDU8 294 aa16.99■□□□□ 0.31
LHX3-202ENST00000371748 SERPINF1P36955 418 aa16.99■□□□□ 0.31
LHX3-202ENST00000371748 HOXA1P49639 335 aaPredicted RBP16.99■□□□□ 0.31
LHX3-202ENST00000371748 FOXF2Q12947 444 aa16.99■□□□□ 0.31
LHX3-202ENST00000371748 GABRA6Q16445 453 aa16.99■□□□□ 0.31
LHX3-202ENST00000371748 PLEKHN1Q494U1 663 aaPredicted RBP16.99■□□□□ 0.31
LHX3-202ENST00000371748 SLC22A25Q6T423 547 aa16.99■□□□□ 0.31
LHX3-202ENST00000371748 TLNRD1Q9H1K6 362 aa16.99■□□□□ 0.31
LHX3-202ENST00000371748 CYTL1Q9NRR1 136 aa16.99■□□□□ 0.31
LHX3-202ENST00000371748 PLSCR2Q9NRY7 297 aa16.99■□□□□ 0.31
LHX3-202ENST00000371748 CARHSP1Q9Y2V2 147 aaKnown RBP16.99■□□□□ 0.31
LHX3-202ENST00000371748 GTF3C1Q12789 2109 aa16.98■□□□□ 0.31
LHX3-202ENST00000371748 TPT1P13693 172 aaKnown RBP16.98■□□□□ 0.31
LHX3-202ENST00000371748 CA6P23280 308 aa16.98■□□□□ 0.31
LHX3-202ENST00000371748 ANKRD55Q3KP44 614 aa16.98■□□□□ 0.31
LHX3-202ENST00000371748 BAP18Q8IXM2 172 aa16.98■□□□□ 0.31
LHX3-202ENST00000371748 OR4A4PQ8NGN8 299 aa16.98■□□□□ 0.31
LHX3-202ENST00000371748 DCUN1D4Q92564 292 aa16.98■□□□□ 0.31
LHX3-202ENST00000371748 NECAP2Q9NVZ3 263 aa16.98■□□□□ 0.31
LHX3-202ENST00000371748 FGF12P61328 243 aa16.97■□□□□ 0.31
LHX3-202ENST00000371748 ERVS71-1P61550 626 aa16.97■□□□□ 0.31
LHX3-202ENST00000371748 NAAAQ02083 359 aa16.97■□□□□ 0.31
LHX3-202ENST00000371748 ACSF3Q4G176 576 aaPredicted RBP16.97■□□□□ 0.31
LHX3-202ENST00000371748 DHRS7BQ6IAN0 325 aaPredicted RBP16.97■□□□□ 0.31
LHX3-202ENST00000371748 ZNF585AQ6P3V2 769 aa16.97■□□□□ 0.31
LHX3-202ENST00000371748 MGAQ8IWI9 3026 aa16.97■□□□□ 0.31
LHX3-202ENST00000371748 SAXO1Q8IYX7 474 aa16.97■□□□□ 0.31
LHX3-202ENST00000371748 ZNF488Q96MN9 340 aa16.97■□□□□ 0.31
LHX3-202ENST00000371748 PRRX2Q99811 253 aa16.97■□□□□ 0.31
LHX3-202ENST00000371748 NMES1Q9C002 83 aa16.97■□□□□ 0.31
LHX3-202ENST00000371748 C14orf166Q9Y224 244 aaKnown RBP16.97■□□□□ 0.31
LHX3-202ENST00000371748 INTS1Q8N201 2190 aaKnown RBP16.97■□□□□ 0.31
LHX3-202ENST00000371748 C3orf80F5H4A9 247 aa16.97■□□□□ 0.31
LHX3-202ENST00000371748 F8W036 122 aa16.97■□□□□ 0.31
LHX3-202ENST00000371748 H0YIZ8 118 aa16.97■□□□□ 0.31
LHX3-202ENST00000371748 TRAPPC2LH3BP13 241 aa16.97■□□□□ 0.31
LHX3-202ENST00000371748 KLK10O43240 276 aa16.97■□□□□ 0.31
LHX3-202ENST00000371748 SMPD2O60906 423 aa16.97■□□□□ 0.31
LHX3-202ENST00000371748 ADAP1O75689 374 aa16.97■□□□□ 0.31
LHX3-202ENST00000371748 RPS2P15880 293 aaKnown RBP16.97■□□□□ 0.31
LHX3-202ENST00000371748 BLOC1S1P78537 153 aa16.97■□□□□ 0.31
LHX3-202ENST00000371748 SURF2Q15527 256 aaPredicted RBP16.97■□□□□ 0.31
LHX3-202ENST00000371748 CDH20Q9HBT6 801 aa16.97■□□□□ 0.31
LHX3-202ENST00000371748 MPC1Q9Y5U8 109 aa16.97■□□□□ 0.31
LHX3-202ENST00000371748 DSPP15924 2871 aaKnown RBP16.97■□□□□ 0.31
LHX3-202ENST00000371748 F12P00748 615 aaPredicted RBP16.96■□□□□ 0.31
LHX3-202ENST00000371748 FAM157CP0CG43 387 aa16.96■□□□□ 0.31
LHX3-202ENST00000371748 PVALBP20472 110 aaPredicted RBP16.96■□□□□ 0.31
LHX3-202ENST00000371748 DUSP1P28562 367 aa16.96■□□□□ 0.31
LHX3-202ENST00000371748 PTGER4P35408 488 aa16.96■□□□□ 0.31
LHX3-202ENST00000371748 TMEM200AQ86VY9 491 aa16.96■□□□□ 0.31
LHX3-202ENST00000371748 MKXQ8IYA7 352 aa16.96■□□□□ 0.31
LHX3-202ENST00000371748 RNF141Q8WVD5 230 aa16.96■□□□□ 0.31
LHX3-202ENST00000371748 TMED6Q8WW62 240 aa16.96■□□□□ 0.31
LHX3-202ENST00000371748 ARL11Q969Q4 196 aa16.96■□□□□ 0.31
LHX3-202ENST00000371748 OR2J1Q9GZK6 312 aa16.96■□□□□ 0.31
LHX3-202ENST00000371748 CACNA1GO43497 2377 aa16.96■□□□□ 0.31
LHX3-202ENST00000371748 PRR14LQ5THK1 2151 aa16.96■□□□□ 0.31
LHX3-202ENST00000371748 A0A0B4J2A0 478 aa16.96■□□□□ 0.31
LHX3-202ENST00000371748 RPL35P42766 123 aaKnown RBP16.96■□□□□ 0.31
LHX3-202ENST00000371748 EXTL1Q92935 676 aa16.96■□□□□ 0.31
LHX3-202ENST00000371748 ESRP2Q9H6T0 727 aaKnown RBP16.96■□□□□ 0.31
LHX3-202ENST00000371748 ZNF286AQ9HBT8 521 aa16.96■□□□□ 0.31
LHX3-202ENST00000371748 SHPKQ9UHJ6 478 aa16.96■□□□□ 0.31
LHX3-202ENST00000371748 FBXO9Q9UK97 447 aaPredicted RBP16.96■□□□□ 0.31
LHX3-202ENST00000371748 AGFG2O95081 481 aa16.95■□□□□ 0.3
LHX3-202ENST00000371748 RAB13P51153 203 aa16.95■□□□□ 0.3
LHX3-202ENST00000371748 PPP1CBP62140 327 aa16.95■□□□□ 0.3
LHX3-202ENST00000371748 TOMM40LQ969M1 308 aa16.95■□□□□ 0.3
LHX3-202ENST00000371748 HSPB6O14558 160 aa16.95■□□□□ 0.3
LHX3-202ENST00000371748 AKR1D1P51857 326 aa16.95■□□□□ 0.3
LHX3-202ENST00000371748 GNG3P63215 75 aa16.95■□□□□ 0.3
LHX3-202ENST00000371748 MRPL49Q13405 166 aaKnown RBP16.95■□□□□ 0.3
LHX3-202ENST00000371748 NSUN5P2Q63ZY6 315 aa16.95■□□□□ 0.3
LHX3-202ENST00000371748 ASCL5Q7RTU5 278 aa16.95■□□□□ 0.3
LHX3-202ENST00000371748 DKK4Q9UBT3 224 aa16.95■□□□□ 0.3
LHX3-202ENST00000371748 LHX6Q9UPM6 363 aa16.95■□□□□ 0.3
LHX3-202ENST00000371748 SHANK1Q9Y566 2161 aa16.94■□□□□ 0.3
LHX3-202ENST00000371748 FAM90A10PA6NDY2 464 aa16.94■□□□□ 0.3
LHX3-202ENST00000371748 FAM90A18PA6NE21 464 aa16.94■□□□□ 0.3
LHX3-202ENST00000371748 FAM90A16PA6NEW6 464 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms