RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 LY86O95711 162 aa4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 IFNA4P05014 189 aa4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 S100A8P05109 93 aa4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 NDUFB7P17568 137 aa4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 CSRP1P21291 193 aaKnown RBP4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 BMP5P22003 454 aa4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 CTSSP25774 331 aa4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 CD80P33681 288 aa4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 MEOX2P50222 304 aa4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 RAB5CP51148 216 aa4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 FOXO1Q12778 655 aa4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 CLINT1Q14677 625 aa4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 IGFBP7Q16270 282 aa4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 SHEQ5VZ18 495 aa4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 ABLIM2Q6H8Q1 611 aa4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 PRSS54Q6PEW0 395 aa4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 GLRX5Q86SX6 157 aa4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 TMEM123Q8N131 208 aa4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 KCNRGQ8N5I3 272 aa4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 HSD17B11Q8NBQ5 300 aa4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 OR1K1Q8NGR3 316 aa4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 RBMXL1Q96E39 390 aaKnown RBP4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 SIGLEC12Q96PQ1 595 aa4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 TAAR6Q96RI8 345 aa4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 HES7Q9BYE0 225 aa4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 RNF150Q9ULK6 438 aa4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 STRAPQ9Y3F4 350 aaKnown RBP4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 SRCAPQ6ZRS2 3230 aa4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 IGHV3-64DA0A0J9YX35 117 aa4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 MFSD2BA6NFX1 497 aa4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 RPL36A-HNRNPH2H7BZ11 118 aa4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 LMX1BO60663 402 aa4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 RD3LP0DJH9 198 aa4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 IGFBP3P17936 291 aaPredicted RBP4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 CHATP28329 748 aa4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 SNCAP37840 140 aa4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 PDLIM3Q53GG5 364 aaPredicted RBP4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 CLEC18BQ6UXF7 455 aa4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 CBLN2Q8IUK8 224 aa4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 SUMF2Q8NBJ7 301 aa4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 FAM213BQ8TBF2 198 aa4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 NTNG2Q96CW9 530 aa4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 TIMD4Q96H15 378 aa4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 S1PR3Q99500 378 aa4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 TIMP4Q99727 224 aa4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 C20orf24Q9BUV8 137 aa4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 RSPO3Q9BXY4 272 aaPredicted RBP4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 FBLN5Q9UBX5 448 aa4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 FREM3P0C091 2139 aa4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 PLXND1Q9Y4D7 1925 aa4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 TRGV10A0A0A0MS01 117 aa4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 C3orf85A0A1B0GTC6 90 aa4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 A0A1W2PPV4 95 aa4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 FAM74A7A6NL05 159 aa4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 IFNA10P01566 189 aa4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 APOA2P02652 100 aa4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 CD74P04233 296 aa4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 CRHP06850 196 aa4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 BCL3P20749 454 aa4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 NFYBP25208 207 aa4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 S100PP25815 95 aa4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 SUCLG1P53597 346 aaKnown RBP4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 FGF12P61328 243 aa4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 PDCD1Q15116 288 aa4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 FAM74A3Q4VXF1 159 aa4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 UQCC3Q6UW78 93 aa4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 SEZ6L2Q6UXD5 910 aa4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 NR2C2APQ86WQ0 139 aa4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 LINC00518Q8N0U6 118 aa4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 OR5D13Q8NGL4 314 aa4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 SLC25A40Q8TBP6 338 aa4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 PARP12Q9H0J9 701 aaKnown RBP4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 RNF122Q9H9V4 155 aa4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 RHOFQ9HBH0 211 aa4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 SLC2A8Q9NY64 477 aa4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 ERRFI1Q9UJM3 462 aaPredicted RBP4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 V9GYS6 101 aa4.62□□□□□ -1.67
SMNDC1-202ENST00000369603 GPR179Q6PRD1 2367 aa4.61□□□□□ -1.67
SMNDC1-202ENST00000369603 ETV2O00321 342 aaPredicted RBP4.61□□□□□ -1.67
SMNDC1-202ENST00000369603 PTGDSP41222 190 aa4.61□□□□□ -1.67
SMNDC1-202ENST00000369603 PRSS12P56730 875 aa4.61□□□□□ -1.67
SMNDC1-202ENST00000369603 SNRPEP62304 92 aaKnown RBP4.61□□□□□ -1.67
SMNDC1-202ENST00000369603 NKX6-1P78426 367 aaPredicted RBP4.61□□□□□ -1.67
SMNDC1-202ENST00000369603 PLAURQ03405 335 aa4.61□□□□□ -1.67
SMNDC1-202ENST00000369603 SNAI3Q3KNW1 292 aa4.61□□□□□ -1.67
SMNDC1-202ENST00000369603 MOGAT2Q3SYC2 334 aa4.61□□□□□ -1.67
SMNDC1-202ENST00000369603 C1orf185Q5T7R7 199 aa4.61□□□□□ -1.67
SMNDC1-202ENST00000369603 PRAMEF5Q5TYX0 476 aa4.61□□□□□ -1.67
SMNDC1-202ENST00000369603 PRAMEF6Q5VXH4 476 aa4.61□□□□□ -1.67
SMNDC1-202ENST00000369603 RBMS3Q6XE24 437 aaKnown RBP4.61□□□□□ -1.67
SMNDC1-202ENST00000369603 TMEM217Q8N7C4 229 aa4.61□□□□□ -1.67
SMNDC1-202ENST00000369603 ZFP62Q8NB50 900 aaPredicted RBP4.61□□□□□ -1.67
SMNDC1-202ENST00000369603 OR4D10Q8NGI6 311 aa4.61□□□□□ -1.67
SMNDC1-202ENST00000369603 OR10V1Q8NGI7 309 aa4.61□□□□□ -1.67
SMNDC1-202ENST00000369603 H1FXQ92522 213 aaKnown RBP4.61□□□□□ -1.67
SMNDC1-202ENST00000369603 PKIBQ9C010 78 aa4.61□□□□□ -1.67
SMNDC1-202ENST00000369603 HEYLQ9NQ87 328 aaPredicted RBP4.61□□□□□ -1.67
SMNDC1-202ENST00000369603 PUS1Q9Y606 427 aaKnown RBP eCLIP4.61□□□□□ -1.67
SMNDC1-202ENST00000369603 LY6G6EA0A0G2JKS1 128 aa4.61□□□□□ -1.67
SMNDC1-202ENST00000369603 A0A0G2JMM0 328 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms